RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C SWM2P40342 146 aa2.47□□□□□ -2.01
CSF1YLR087C HFM1P51979 1187 aa2.47□□□□□ -2.01
CSF1YLR087C LIF1P53150 421 aa2.47□□□□□ -2.01
CSF1YLR087C RMD1Q03441 430 aa2.47□□□□□ -2.01
CSF1YLR087C MMP1Q12372 583 aa2.47□□□□□ -2.01
CSF1YLR087C NUP188P52593 1655 aaKnown RBP2.47□□□□□ -2.01
CSF1YLR087C PDC1P06169 563 aaKnown RBP2.47□□□□□ -2.01
CSF1YLR087C CDC24P11433 854 aaPredicted RBP2.47□□□□□ -2.01
CSF1YLR087C CHS3P29465 1165 aa2.47□□□□□ -2.01
CSF1YLR087C SWH1P35845 1188 aa2.47□□□□□ -2.01
CSF1YLR087C MYO3P36006 1272 aa2.47□□□□□ -2.01
CSF1YLR087C RTG3P38165 486 aa2.47□□□□□ -2.01
CSF1YLR087C VAC7P53950 1165 aa2.47□□□□□ -2.01
CSF1YLR087C ATG17Q06410 417 aa2.47□□□□□ -2.01
CSF1YLR087C SPN1Q06505 410 aaPredicted RBP2.47□□□□□ -2.01
CSF1YLR087C RSA1Q08932 381 aa2.47□□□□□ -2.01
CSF1YLR087C RUP1Q12242 671 aa2.47□□□□□ -2.01
CSF1YLR087C ELF1P36053 145 aa2.47□□□□□ -2.01
CSF1YLR087C FMP23P38231 175 aa2.47□□□□□ -2.01
CSF1YLR087C RIM4P38741 713 aa2.47□□□□□ -2.01
CSF1YLR087C SCC4P40090 624 aa2.47□□□□□ -2.01
CSF1YLR087C YFH7P43591 353 aa2.47□□□□□ -2.01
CSF1YLR087C PMT3P47190 753 aa2.47□□□□□ -2.01
CSF1YLR087C SHE10P53075 577 aa2.47□□□□□ -2.01
CSF1YLR087C RIX7Q07844 837 aaKnown RBP2.47□□□□□ -2.01
CSF1YLR087C CHS5Q12114 671 aaKnown RBP2.47□□□□□ -2.01
CSF1YLR087C NSI1Q12457 570 aa2.47□□□□□ -2.01
CSF1YLR087C FRS1P15624 595 aaKnown RBP2.47□□□□□ -2.01
CSF1YLR087C RNR1P21524 888 aaKnown RBP2.47□□□□□ -2.01
CSF1YLR087C SRB4P32569 687 aa2.47□□□□□ -2.01
CSF1YLR087C RAD5P32849 1169 aaPredicted RBP2.47□□□□□ -2.01
CSF1YLR087C FYV10P40492 516 aa2.47□□□□□ -2.01
CSF1YLR087C FMP32P43557 207 aa2.47□□□□□ -2.01
CSF1YLR087C NCS2P53923 493 aaPredicted RBP2.47□□□□□ -2.01
CSF1YLR087C DYN3Q04949 312 aa2.47□□□□□ -2.01
CSF1YLR087C DPS1P04802 557 aaKnown RBP2.46□□□□□ -2.02
CSF1YLR087C RPS6AP0CX37 236 aaKnown RBP2.46□□□□□ -2.02
CSF1YLR087C RPS6BP0CX38 236 aaPredicted RBP2.46□□□□□ -2.02
CSF1YLR087C TEC1P18412 486 aa2.46□□□□□ -2.02
CSF1YLR087C AIM9P40053 627 aaKnown RBP2.46□□□□□ -2.02
CSF1YLR087C MPS3P47069 682 aa2.46□□□□□ -2.02
CSF1YLR087C SCY1P53009 804 aa2.46□□□□□ -2.02
CSF1YLR087C NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
CSF1YLR087C BCK1Q01389 1478 aa2.46□□□□□ -2.02
CSF1YLR087C SNU114P36048 1008 aaKnown RBP2.46□□□□□ -2.02
CSF1YLR087C RTS1P38903 757 aa2.46□□□□□ -2.02
CSF1YLR087C SEC9P40357 651 aa2.46□□□□□ -2.02
CSF1YLR087C COP1P53622 1201 aaKnown RBP2.46□□□□□ -2.02
CSF1YLR087C YML020WQ03722 664 aa2.46□□□□□ -2.02
CSF1YLR087C YCS4Q06156 1176 aa2.46□□□□□ -2.02
CSF1YLR087C APC5Q08683 685 aa2.46□□□□□ -2.02
CSF1YLR087C SBP1P10080 294 aaKnown RBP2.46□□□□□ -2.02
CSF1YLR087C SEC18P18759 758 aaKnown RBP2.46□□□□□ -2.02
CSF1YLR087C FBP26P32604 452 aa2.46□□□□□ -2.02
CSF1YLR087C CNS1P33313 385 aa2.46□□□□□ -2.02
CSF1YLR087C COS111P38308 924 aa2.46□□□□□ -2.02
CSF1YLR087C POP2P39008 433 aa2.46□□□□□ -2.02
CSF1YLR087C STL1P39932 569 aa2.46□□□□□ -2.02
CSF1YLR087C SPR3P41901 512 aa2.46□□□□□ -2.02
CSF1YLR087C ALT1P52893 592 aa2.46□□□□□ -2.02
CSF1YLR087C YGR053CP53234 283 aa2.46□□□□□ -2.02
CSF1YLR087C RBS1Q05672 457 aaKnown RBP2.46□□□□□ -2.02
CSF1YLR087C TRM5P38793 499 aa2.46□□□□□ -2.02
CSF1YLR087C TMA108P40462 946 aa2.46□□□□□ -2.02
CSF1YLR087C YIL055CP40523 627 aaKnown RBP2.46□□□□□ -2.02
CSF1YLR087C YDR278CQ05612 105 aa2.46□□□□□ -2.02
CSF1YLR087C YDL121CQ07541 149 aa2.46□□□□□ -2.02
CSF1YLR087C CTI6Q08923 506 aa2.46□□□□□ -2.02
CSF1YLR087C SPO23P33757 523 aa2.46□□□□□ -2.02
CSF1YLR087C SHC1P39000 512 aa2.46□□□□□ -2.02
CSF1YLR087C RSM25P40496 264 aa2.46□□□□□ -2.02
CSF1YLR087C YRB2P40517 327 aa2.46□□□□□ -2.02
CSF1YLR087C MGA2P40578 1113 aa2.46□□□□□ -2.02
CSF1YLR087C ATF2P53296 535 aa2.46□□□□□ -2.02
CSF1YLR087C ALF1P53904 254 aa2.46□□□□□ -2.02
CSF1YLR087C YNL144CP53907 740 aa2.46□□□□□ -2.02
CSF1YLR087C YLR283WQ05867 314 aa2.46□□□□□ -2.02
CSF1YLR087C YPR172WQ06608 200 aa2.46□□□□□ -2.02
CSF1YLR087C GPN2Q08726 347 aaPredicted RBP2.46□□□□□ -2.02
CSF1YLR087C YPL216WQ08964 1102 aa2.46□□□□□ -2.02
CSF1YLR087C NTO1Q12311 748 aa2.46□□□□□ -2.02
CSF1YLR087C ADF1Q2V2Q1 113 aa2.46□□□□□ -2.02
CSF1YLR087C SPO12P17123 173 aa2.46□□□□□ -2.02
CSF1YLR087C ACO2P39533 789 aa2.46□□□□□ -2.02
CSF1YLR087C JLP2P40206 208 aa2.46□□□□□ -2.02
CSF1YLR087C GNP1P48813 663 aa2.46□□□□□ -2.02
CSF1YLR087C ATG38Q05789 226 aaKnown RBP2.46□□□□□ -2.02
CSF1YLR087C MAK21Q12176 1025 aaKnown RBP2.46□□□□□ -2.02
CSF1YLR087C BIK1P11709 440 aa2.46□□□□□ -2.02
CSF1YLR087C YAP1P19880 650 aaKnown RBP2.46□□□□□ -2.02
CSF1YLR087C TRX1P22217 103 aaKnown RBP2.46□□□□□ -2.02
CSF1YLR087C AFR1P33304 620 aa2.46□□□□□ -2.02
CSF1YLR087C PES4P39684 611 aa2.46□□□□□ -2.02
CSF1YLR087C SSL2Q00578 843 aa2.46□□□□□ -2.02
CSF1YLR087C RSM22P36056 628 aa2.45□□□□□ -2.02
CSF1YLR087C IFA38P38286 347 aa2.45□□□□□ -2.02
CSF1YLR087C YFL034WP43564 1073 aa2.45□□□□□ -2.02
CSF1YLR087C VTC2P43585 828 aa2.45□□□□□ -2.02
CSF1YLR087C JSN1P47135 1091 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
CSF1YLR087C YGR125WP53273 1036 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 30 ms