RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C RQC2Q12532 1038 aaKnown RBP4.12□□□□□ -1.75
CSF1YLR087C AIM44Q99299 758 aa3.56□□□□□ -1.84
CSF1YLR087C SKI3P17883 1432 aaKnown RBP3.5□□□□□ -1.85
CSF1YLR087C SAS10Q12136 610 aaPredicted RBP3.43□□□□□ -1.86
CSF1YLR087C CAB3P36076 571 aa3.38□□□□□ -1.87
CSF1YLR087C TAF7Q05021 590 aa3.36□□□□□ -1.87
CSF1YLR087C SPA2P23201 1466 aaKnown RBP3.36□□□□□ -1.87
CSF1YLR087C LEO1P38439 464 aa3.33□□□□□ -1.88
CSF1YLR087C INO80P53115 1489 aa3.32□□□□□ -1.88
CSF1YLR087C MNN4P36044 1178 aa3.31□□□□□ -1.88
CSF1YLR087C TFA1P36100 482 aa3.31□□□□□ -1.88
CSF1YLR087C RIX1P38883 763 aaPredicted RBP3.3□□□□□ -1.88
CSF1YLR087C AVT3P36062 692 aa3.28□□□□□ -1.88
CSF1YLR087C CHD1P32657 1468 aa3.26□□□□□ -1.89
CSF1YLR087C TCB3Q03640 1545 aaKnown RBP3.26□□□□□ -1.89
CSF1YLR087C RSE1Q04693 1361 aaKnown RBP3.24□□□□□ -1.89
CSF1YLR087C RLF2Q12495 606 aa3.22□□□□□ -1.89
CSF1YLR087C HGH1P48362 394 aaKnown RBP3.21□□□□□ -1.9
CSF1YLR087C YRB30P53107 440 aaPredicted RBP3.21□□□□□ -1.9
CSF1YLR087C DRS1P32892 752 aaKnown RBP3.21□□□□□ -1.9
CSF1YLR087C BFR2Q06631 534 aaKnown RBP3.19□□□□□ -1.9
CSF1YLR087C SPT2P06843 333 aaPredicted RBP3.19□□□□□ -1.9
CSF1YLR087C QCR6P00127 147 aa3.18□□□□□ -1.9
CSF1YLR087C FPR3P38911 411 aaKnown RBP3.17□□□□□ -1.9
CSF1YLR087C RKM3P38222 552 aa3.17□□□□□ -1.9
CSF1YLR087C FUN12P39730 1002 aaKnown RBP3.16□□□□□ -1.9
CSF1YLR087C TOP1P04786 769 aa3.16□□□□□ -1.9
CSF1YLR087C SCT1P32784 759 aa3.15□□□□□ -1.9
CSF1YLR087C PLP2Q12017 286 aa3.14□□□□□ -1.91
CSF1YLR087C SEC3P33332 1336 aaKnown RBP3.14□□□□□ -1.91
CSF1YLR087C HSP82P02829 709 aaKnown RBP3.13□□□□□ -1.91
CSF1YLR087C SWE1P32944 819 aa3.13□□□□□ -1.91
CSF1YLR087C SEC27P41811 889 aaKnown RBP3.1□□□□□ -1.91
CSF1YLR087C FPR4Q06205 392 aaPredicted RBP3.09□□□□□ -1.91
CSF1YLR087C YGL081WP53156 320 aa3.09□□□□□ -1.91
CSF1YLR087C PET111P08468 800 aa3.08□□□□□ -1.92
CSF1YLR087C RLP24Q07915 199 aaKnown RBP3.08□□□□□ -1.92
CSF1YLR087C NAB3P38996 802 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
CSF1YLR087C CHZ1P40019 153 aaPredicted RBP3.06□□□□□ -1.92
CSF1YLR087C LEU3P08638 886 aa3.06□□□□□ -1.92
CSF1YLR087C NOP2P40991 618 aaKnown RBP3.06□□□□□ -1.92
CSF1YLR087C HUL5P53119 910 aa3.06□□□□□ -1.92
CSF1YLR087C DOS2P54858 310 aa3.06□□□□□ -1.92
CSF1YLR087C YML133CQ03099 1374 aa3.05□□□□□ -1.92
CSF1YLR087C YLL067CQ07888 1374 aa3.05□□□□□ -1.92
CSF1YLR087C YLL066CQ99208 1374 aa3.05□□□□□ -1.92
CSF1YLR087C IOC4Q04213 475 aa3.05□□□□□ -1.92
CSF1YLR087C SPP41P38904 1435 aa3.05□□□□□ -1.92
CSF1YLR087C IRC20Q06554 1556 aa3.03□□□□□ -1.92
CSF1YLR087C SUB1P54000 292 aaKnown RBP3.03□□□□□ -1.92
CSF1YLR087C IFH1P39520 1085 aa3.02□□□□□ -1.93
CSF1YLR087C XRN1P22147 1528 aaKnown RBP3.02□□□□□ -1.93
CSF1YLR087C SPT6P23615 1451 aaKnown RBP3.01□□□□□ -1.93
CSF1YLR087C SFB2P53953 876 aa3□□□□□ -1.93
CSF1YLR087C PAN1P32521 1480 aa3□□□□□ -1.93
CSF1YLR087C SIS2P36024 562 aa3□□□□□ -1.93
CSF1YLR087C YGR130CP53278 816 aa3□□□□□ -1.93
CSF1YLR087C PDR10P51533 1564 aa2.99□□□□□ -1.93
CSF1YLR087C SMC4Q12267 1418 aa2.99□□□□□ -1.93
CSF1YLR087C RNA1P11745 407 aaKnown RBP2.99□□□□□ -1.93
CSF1YLR087C MEF1P25039 761 aa2.99□□□□□ -1.93
CSF1YLR087C YFR016CP43597 1233 aaKnown RBP2.98□□□□□ -1.93
CSF1YLR087C NOP7P53261 605 aaKnown RBP2.98□□□□□ -1.93
CSF1YLR087C PDR5P33302 1511 aaKnown RBP2.97□□□□□ -1.93
CSF1YLR087C TCB2P48231 1178 aa2.97□□□□□ -1.93
CSF1YLR087C NOP53Q12080 455 aaKnown RBP2.97□□□□□ -1.93
CSF1YLR087C POL4P25615 582 aa2.96□□□□□ -1.94
CSF1YLR087C VPS72Q03388 795 aa2.96□□□□□ -1.94
CSF1YLR087C YRF1-4O13559 1382 aa2.95□□□□□ -1.94
CSF1YLR087C URN1Q06525 465 aaKnown RBP2.95□□□□□ -1.94
CSF1YLR087C EFB1P32471 206 aaKnown RBP2.94□□□□□ -1.94
CSF1YLR087C PUP2P32379 260 aa2.93□□□□□ -1.94
CSF1YLR087C YSP2Q06681 1438 aa2.93□□□□□ -1.94
CSF1YLR087C SPT7P35177 1332 aa2.93□□□□□ -1.94
CSF1YLR087C SPB4P25808 606 aaPredicted RBP2.93□□□□□ -1.94
CSF1YLR087C YRM1Q12340 786 aa2.93□□□□□ -1.94
CSF1YLR087C PET100P38958 111 aa2.92□□□□□ -1.94
CSF1YLR087C ENP1P38333 483 aaKnown RBP2.92□□□□□ -1.94
CSF1YLR087C ASF1P32447 279 aa2.91□□□□□ -1.94
CSF1YLR087C TOA1P32773 286 aa2.91□□□□□ -1.94
CSF1YLR087C TIF5P38431 405 aaKnown RBP2.91□□□□□ -1.94
CSF1YLR087C SGS1P35187 1447 aa2.91□□□□□ -1.94
CSF1YLR087C NUP170P38181 1502 aa2.91□□□□□ -1.94
CSF1YLR087C RPS0BP46654 252 aaKnown RBP2.91□□□□□ -1.94
CSF1YLR087C YPR148CQ06523 435 aa2.9□□□□□ -1.95
CSF1YLR087C ECM5Q03214 1411 aa2.89□□□□□ -1.95
CSF1YLR087C PEP1P32319 1579 aa2.89□□□□□ -1.95
CSF1YLR087C OCA5P38738 679 aa2.89□□□□□ -1.95
CSF1YLR087C ORC1P54784 914 aaPredicted RBP2.89□□□□□ -1.95
CSF1YLR087C CEF1Q03654 590 aaPredicted RBP2.89□□□□□ -1.95
CSF1YLR087C HSC82P15108 705 aaKnown RBP2.89□□□□□ -1.95
CSF1YLR087C TSC11P40061 1430 aa2.88□□□□□ -1.95
CSF1YLR087C NOP15P53927 220 aaPredicted RBP2.88□□□□□ -1.95
CSF1YLR087C DPB3P27344 201 aa2.88□□□□□ -1.95
CSF1YLR087C TAF2P23255 1407 aa2.88□□□□□ -1.95
CSF1YLR087C TYW1Q08960 810 aaKnown RBP2.88□□□□□ -1.95
CSF1YLR087C MYO2P19524 1574 aaKnown RBP2.88□□□□□ -1.95
CSF1YLR087C CWC22P53333 577 aaKnown RBP2.88□□□□□ -1.95
CSF1YLR087C EBP2P36049 427 aaKnown RBP2.87□□□□□ -1.95
CSF1YLR087C RRP1P35178 278 aaPredicted RBP2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms