RNA–Protein interactions for RNA: YHL025W

SNF6, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF6, Length 999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF6YHL025W YJR107WP47145 328 aa12.42□□□□□ -0.42
SNF6YHL025W NBP1P52919 319 aaPredicted RBP12.42□□□□□ -0.42
SNF6YHL025W FMP30Q02883 468 aa12.42□□□□□ -0.42
SNF6YHL025W MSC6Q08818 692 aaKnown RBP12.42□□□□□ -0.42
SNF6YHL025W MED1Q12321 566 aa12.42□□□□□ -0.42
SNF6YHL025W PDC1P06169 563 aaKnown RBP12.41□□□□□ -0.42
SNF6YHL025W SPO11P23179 398 aa12.41□□□□□ -0.42
SNF6YHL025W MRF1P30775 413 aaPredicted RBP12.41□□□□□ -0.42
SNF6YHL025W SPT8P38915 602 aa12.41□□□□□ -0.42
SNF6YHL025W TOF1P53840 1238 aa12.41□□□□□ -0.42
SNF6YHL025W TRM11Q12463 433 aa12.41□□□□□ -0.42
SNF6YHL025W RPC53P25441 422 aa12.4□□□□□ -0.42
SNF6YHL025W CDC48P25694 835 aaKnown RBP12.4□□□□□ -0.42
SNF6YHL025W SPC110P32380 944 aa12.4□□□□□ -0.42
SNF6YHL025W TIM23P32897 222 aa12.4□□□□□ -0.42
SNF6YHL025W PXL1P36166 706 aa12.4□□□□□ -0.42
SNF6YHL025W UBP13P38187 747 aa12.4□□□□□ -0.42
SNF6YHL025W MIP6P38760 659 aaKnown RBP12.4□□□□□ -0.42
SNF6YHL025W MDR1P53258 950 aa12.4□□□□□ -0.42
SNF6YHL025W SMC5Q08204 1093 aa12.4□□□□□ -0.42
SNF6YHL025W MAM3Q12296 706 aa12.4□□□□□ -0.42
SNF6YHL025W RPS6AP0CX37 236 aaKnown RBP12.39□□□□□ -0.43
SNF6YHL025W RPS6BP0CX38 236 aaPredicted RBP12.39□□□□□ -0.43
SNF6YHL025W DBP5P20449 482 aaKnown RBP12.39□□□□□ -0.43
SNF6YHL025W YUR1P26725 428 aa12.39□□□□□ -0.43
SNF6YHL025W SEC65P29478 273 aa12.39□□□□□ -0.43
SNF6YHL025W BCS1P32839 456 aa12.39□□□□□ -0.43
SNF6YHL025W ATG19P35193 415 aa12.39□□□□□ -0.43
SNF6YHL025W SHM1P37292 490 aaPredicted RBP12.39□□□□□ -0.43
SNF6YHL025W YEL025CP39991 1188 aa12.39□□□□□ -0.43
SNF6YHL025W ARK1P53974 638 aa12.39□□□□□ -0.43
SNF6YHL025W PHO8P11491 566 aa12.38□□□□□ -0.43
SNF6YHL025W DAL7P21826 554 aa12.38□□□□□ -0.43
SNF6YHL025W TRK2P28584 889 aa12.38□□□□□ -0.43
SNF6YHL025W YSC83P32792 385 aa12.38□□□□□ -0.43
SNF6YHL025W KSP1P38691 1029 aaKnown RBP12.38□□□□□ -0.43
SNF6YHL025W ROD1Q02805 837 aa12.38□□□□□ -0.43
SNF6YHL025W RPC25P35718 212 aa12.37□□□□□ -0.43
SNF6YHL025W EFM2P38347 419 aa12.37□□□□□ -0.43
SNF6YHL025W UBP5P39944 805 aa12.37□□□□□ -0.43
SNF6YHL025W STR2P47164 639 aa12.37□□□□□ -0.43
SNF6YHL025W RPS7BP48164 190 aaKnown RBP12.37□□□□□ -0.43
SNF6YHL025W CCM1P48237 864 aaPredicted RBP12.37□□□□□ -0.43
SNF6YHL025W CAF130P53280 1122 aaPredicted RBP12.37□□□□□ -0.43
SNF6YHL025W SPO75Q07798 868 aa12.37□□□□□ -0.43
SNF6YHL025W YLL058WQ12198 575 aa12.37□□□□□ -0.43
SNF6YHL025W ECM29P38737 1868 aa12.36□□□□□ -0.43
SNF6YHL025W APL1P27351 700 aa12.36□□□□□ -0.43
SNF6YHL025W RME1P32338 300 aaKnown RBP12.36□□□□□ -0.43
SNF6YHL025W VPS35P34110 944 aa12.36□□□□□ -0.43
SNF6YHL025W YEL1P34225 687 aa12.36□□□□□ -0.43
SNF6YHL025W GPI13Q07830 1017 aa12.36□□□□□ -0.43
SNF6YHL025W DBP1P24784 617 aaKnown RBP12.35□□□□□ -0.43
SNF6YHL025W COT1P32798 439 aa12.35□□□□□ -0.43
SNF6YHL025W RTT107P38850 1070 aa12.35□□□□□ -0.43
SNF6YHL025W YCG1Q06680 1035 aa12.35□□□□□ -0.43
SNF6YHL025W NOC3Q07896 663 aaPredicted RBP12.35□□□□□ -0.43
SNF6YHL025W YDR461C-AQ2V2P7 80 aa12.35□□□□□ -0.43
SNF6YHL025W DED1P06634 604 aaKnown RBP12.34□□□□□ -0.43
SNF6YHL025W SSB1P11484 613 aaKnown RBP12.34□□□□□ -0.43
SNF6YHL025W LEO1P38439 464 aa12.34□□□□□ -0.43
SNF6YHL025W VFA1P40080 203 aa12.34□□□□□ -0.43
SNF6YHL025W SSB2P40150 613 aaKnown RBP12.34□□□□□ -0.43
SNF6YHL025W HFM1P51979 1187 aa12.34□□□□□ -0.43
SNF6YHL025W COQ9Q05779 260 aa12.34□□□□□ -0.43
SNF6YHL025W YLR287CQ05881 355 aa12.34□□□□□ -0.43
SNF6YHL025W ESC2Q06340 456 aa12.34□□□□□ -0.43
SNF6YHL025W PLP2Q12017 286 aa12.34□□□□□ -0.43
SNF6YHL025W HMI1Q12039 706 aa12.34□□□□□ -0.43
SNF6YHL025W CWC2Q12046 339 aaPredicted RBP12.34□□□□□ -0.43
SNF6YHL025W NCR1Q12200 1170 aa12.34□□□□□ -0.43
SNF6YHL025W POX1P13711 748 aa12.33□□□□□ -0.44
SNF6YHL025W MNN4P36044 1178 aa12.33□□□□□ -0.44
SNF6YHL025W SCS3P53012 380 aa12.33□□□□□ -0.44
SNF6YHL025W CTR9P89105 1077 aa12.33□□□□□ -0.44
SNF6YHL025W GIR2Q03768 265 aaPredicted RBP12.33□□□□□ -0.44
SNF6YHL025W APL4Q12028 832 aa12.33□□□□□ -0.44
SNF6YHL025W KIN82P25341 720 aa12.32□□□□□ -0.44
SNF6YHL025W NAM7P30771 971 aaKnown RBP12.32□□□□□ -0.44
SNF6YHL025W EFT1P32324 842 aaKnown RBP12.32□□□□□ -0.44
SNF6YHL025W IRE1P32361 1115 aa12.32□□□□□ -0.44
SNF6YHL025W MFT1P33441 392 aaKnown RBP12.32□□□□□ -0.44
SNF6YHL025W KTR2P33550 425 aa12.32□□□□□ -0.44
SNF6YHL025W MNR2P35724 969 aa12.32□□□□□ -0.44
SNF6YHL025W ERC1P38767 581 aa12.32□□□□□ -0.44
SNF6YHL025W LCB2P40970 561 aa12.32□□□□□ -0.44
SNF6YHL025W FIG4P42837 879 aa12.32□□□□□ -0.44
SNF6YHL025W STU2P46675 888 aa12.32□□□□□ -0.44
SNF6YHL025W AVT1P47082 602 aa12.32□□□□□ -0.44
SNF6YHL025W COS5P47187 383 aa12.32□□□□□ -0.44
SNF6YHL025W PSP2P50109 593 aaKnown RBP12.32□□□□□ -0.44
SNF6YHL025W TAM41P53230 385 aa12.32□□□□□ -0.44
SNF6YHL025W RLP24Q07915 199 aaKnown RBP12.32□□□□□ -0.44
SNF6YHL025W FAL1Q12099 399 aaKnown RBP12.32□□□□□ -0.44
SNF6YHL025W ATG9Q12142 997 aa12.32□□□□□ -0.44
SNF6YHL025W RRP6Q12149 733 aaKnown RBP12.32□□□□□ -0.44
SNF6YHL025W SCP160P06105 1222 aaKnown RBP RIP-Chip data12.31□□□□□ -0.44not detected
SNF6YHL025W SWI6P09959 803 aa12.31□□□□□ -0.44
SNF6YHL025W EAF5P39995 279 aa12.31□□□□□ -0.44
SNF6YHL025W RTT102P53330 157 aa12.31□□□□□ -0.44
Retrieved 100 of 5,963 RNA–protein pairs in 100.4 ms