RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W TDA5Q06417 326 aaKnown RBP3.64□□□□□ -1.83
SIZ1YDR409W AOS1Q06624 347 aa3.64□□□□□ -1.83
SIZ1YDR409W CTI6Q08923 506 aa3.64□□□□□ -1.83
SIZ1YDR409W APL4Q12028 832 aa3.64□□□□□ -1.83
SIZ1YDR409W KEX2P13134 814 aa3.64□□□□□ -1.83
SIZ1YDR409W UBC1P21734 215 aaKnown RBP3.64□□□□□ -1.83
SIZ1YDR409W MSH3P25336 1018 aa3.64□□□□□ -1.83
SIZ1YDR409W DPB3P27344 201 aa3.64□□□□□ -1.83
SIZ1YDR409W SWC3P31376 625 aa3.64□□□□□ -1.83
SIZ1YDR409W CBF2P32504 956 aa3.64□□□□□ -1.83
SIZ1YDR409W SWI3P32591 825 aa3.64□□□□□ -1.83
SIZ1YDR409W RRP1P35178 278 aaPredicted RBP3.64□□□□□ -1.83
SIZ1YDR409W BLI1P35727 113 aa3.64□□□□□ -1.83
SIZ1YDR409W APL2P36000 726 aaPredicted RBP3.64□□□□□ -1.83
SIZ1YDR409W MUD2P36084 527 aaKnown RBP3.64□□□□□ -1.83
SIZ1YDR409W KTR3P38130 404 aaPredicted RBP3.64□□□□□ -1.83
SIZ1YDR409W PSY4P38193 441 aa3.64□□□□□ -1.83
SIZ1YDR409W GDT1P38301 280 aaPredicted RBP3.64□□□□□ -1.83
SIZ1YDR409W YHL017WP38745 532 aa3.64□□□□□ -1.83
SIZ1YDR409W CCC2P38995 1004 aa3.64□□□□□ -1.83
SIZ1YDR409W GPI8P49018 411 aa3.64□□□□□ -1.83
SIZ1YDR409W TLG1Q03322 224 aa3.64□□□□□ -1.83
SIZ1YDR409W ARA2Q04212 335 aa3.64□□□□□ -1.83
SIZ1YDR409W YCG1Q06680 1035 aa3.64□□□□□ -1.83
SIZ1YDR409W TUM1Q08686 304 aaKnown RBP3.64□□□□□ -1.83
SIZ1YDR409W MED1Q12321 566 aa3.64□□□□□ -1.83
SIZ1YDR409W PDR18P53756 1333 aa3.64□□□□□ -1.83
SIZ1YDR409W PET123P17558 318 aa3.64□□□□□ -1.83
SIZ1YDR409W DHR2P36009 735 aaPredicted RBP3.64□□□□□ -1.83
SIZ1YDR409W ABZ1P37254 787 aaPredicted RBP3.64□□□□□ -1.83
SIZ1YDR409W PCH2P38126 564 aa3.64□□□□□ -1.83
SIZ1YDR409W XDJ1P39102 459 aa3.64□□□□□ -1.83
SIZ1YDR409W VPS8P39702 1274 aa3.64□□□□□ -1.83
SIZ1YDR409W BUL2Q03758 920 aaKnown RBP3.64□□□□□ -1.83
SIZ1YDR409W RPN7Q06103 429 aaKnown RBP3.64□□□□□ -1.83
SIZ1YDR409W MCM5P29496 775 aaKnown RBP3.63□□□□□ -1.83
SIZ1YDR409W ISC10P32645 267 aa3.63□□□□□ -1.83
SIZ1YDR409W RRN3P36070 627 aa3.63□□□□□ -1.83
SIZ1YDR409W RGD1P38339 666 aa3.63□□□□□ -1.83
SIZ1YDR409W VPS4P52917 437 aa3.63□□□□□ -1.83
SIZ1YDR409W YGL242CP53066 181 aa3.63□□□□□ -1.83
SIZ1YDR409W VPS75P53853 264 aa3.63□□□□□ -1.83
SIZ1YDR409W ALO1P54783 526 aaKnown RBP3.63□□□□□ -1.83
SIZ1YDR409W UME1Q03010 460 aa3.63□□□□□ -1.83
SIZ1YDR409W UGO1Q03327 502 aa3.63□□□□□ -1.83
SIZ1YDR409W MTQ2Q03920 221 aaPredicted RBP3.63□□□□□ -1.83
SIZ1YDR409W TAF11Q04226 346 aa3.63□□□□□ -1.83
SIZ1YDR409W YKU80Q04437 629 aa3.63□□□□□ -1.83
SIZ1YDR409W PGC1Q08959 321 aa3.63□□□□□ -1.83
SIZ1YDR409W RRP36Q12481 300 aaPredicted RBP3.63□□□□□ -1.83
SIZ1YDR409W MATALPHA2P0CY08 210 aa3.63□□□□□ -1.83
SIZ1YDR409W HMLALPHA2P0CY09 210 aa3.63□□□□□ -1.83
SIZ1YDR409W HSF1P10961 833 aa3.63□□□□□ -1.83
SIZ1YDR409W MIH1P23748 554 aa3.63□□□□□ -1.83
SIZ1YDR409W DPH2P32461 534 aa3.63□□□□□ -1.83
SIZ1YDR409W SWH1P35845 1188 aa3.63□□□□□ -1.83
SIZ1YDR409W YKT6P36015 200 aaKnown RBP3.63□□□□□ -1.83
SIZ1YDR409W GDH3P39708 457 aa3.63□□□□□ -1.83
SIZ1YDR409W EMW1P42842 904 aaKnown RBP3.63□□□□□ -1.83
SIZ1YDR409W NIT2P47016 307 aa3.63□□□□□ -1.83
SIZ1YDR409W MLC1P53141 149 aa3.63□□□□□ -1.83
SIZ1YDR409W CEG1Q01159 459 aaPredicted RBP3.63□□□□□ -1.83
SIZ1YDR409W RRB1Q04225 511 aaKnown RBP3.63□□□□□ -1.83
SIZ1YDR409W YLR407WQ06070 228 aa3.63□□□□□ -1.83
SIZ1YDR409W YPQ2Q06328 317 aa3.63□□□□□ -1.83
SIZ1YDR409W HDA3Q06623 655 aa3.63□□□□□ -1.83
SIZ1YDR409W YPL225WQ08971 146 aaKnown RBP3.63□□□□□ -1.83
SIZ1YDR409W TFB4Q12004 338 aa3.63□□□□□ -1.83
SIZ1YDR409W ATG9Q12142 997 aa3.63□□□□□ -1.83
SIZ1YDR409W YOR131CQ12486 218 aa3.63□□□□□ -1.83
SIZ1YDR409W SWI1P09547 1314 aa3.62□□□□□ -1.83
SIZ1YDR409W PHO13P19881 312 aa3.62□□□□□ -1.83
SIZ1YDR409W RPO26P20435 155 aa3.62□□□□□ -1.83
SIZ1YDR409W PCL2P25693 308 aa3.62□□□□□ -1.83
SIZ1YDR409W CCT4P39078 528 aaKnown RBP3.62□□□□□ -1.83
SIZ1YDR409W DAN4P47179 1161 aa3.62□□□□□ -1.83
SIZ1YDR409W YGR125WP53273 1036 aa3.62□□□□□ -1.83
SIZ1YDR409W PUS6P53294 404 aa3.62□□□□□ -1.83
SIZ1YDR409W ALF1P53904 254 aa3.62□□□□□ -1.83
SIZ1YDR409W YLR257WQ06146 321 aaKnown RBP3.62□□□□□ -1.83
SIZ1YDR409W RRP6Q12149 733 aaKnown RBP3.62□□□□□ -1.83
SIZ1YDR409W SEC39Q12745 709 aa3.62□□□□□ -1.83
SIZ1YDR409W NCB2Q92317 146 aa3.62□□□□□ -1.83
SIZ1YDR409W UTP10P42945 1769 aaKnown RBP3.62□□□□□ -1.83
SIZ1YDR409W CMP2P14747 604 aa3.62□□□□□ -1.83
SIZ1YDR409W YEL043WP32618 956 aa3.62□□□□□ -1.83
SIZ1YDR409W AFR1P33304 620 aa3.62□□□□□ -1.83
SIZ1YDR409W VBA5P36172 582 aa3.62□□□□□ -1.83
SIZ1YDR409W MNT3P40549 630 aa3.62□□□□□ -1.83
SIZ1YDR409W SPR3P41901 512 aa3.62□□□□□ -1.83
SIZ1YDR409W DAS1P47005 663 aa3.62□□□□□ -1.83
SIZ1YDR409W APT1P49435 187 aaKnown RBP3.62□□□□□ -1.83
SIZ1YDR409W VTC3Q02725 835 aa3.62□□□□□ -1.83
SIZ1YDR409W EIS1Q05050 843 aaKnown RBP3.62□□□□□ -1.83
SIZ1YDR409W REC8Q12188 680 aa3.62□□□□□ -1.83
SIZ1YDR409W YDL206WQ12424 762 aa3.62□□□□□ -1.83
SIZ1YDR409W KRR1P25586 316 aaPredicted RBP3.61□□□□□ -1.83
SIZ1YDR409W CDC15P27636 974 aa3.61□□□□□ -1.83
SIZ1YDR409W SAP190P36123 1033 aa3.61□□□□□ -1.83
SIZ1YDR409W RFC5P38251 354 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms