RNA–Protein interactions for RNA: YPL127C

HHO1, Transcript of Histone H1, linker histone with roles in meiosis and sporulation, yeast

Gene HHO1, Length 777 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HHO1	YPL127C	HMI1	Q12039	706 aa		11.57	□□□□□ -0.56
HHO1	YPL127C	SAM1	P10659	382 aa	Known RBP	11.56	□□□□□ -0.56
HHO1	YPL127C	RPC53	P25441	422 aa		11.56	□□□□□ -0.56
HHO1	YPL127C	YDJ1	P25491	409 aa	Known RBP	11.56	□□□□□ -0.56
HHO1	YPL127C	PCH2	P38126	564 aa		11.56	□□□□□ -0.56
HHO1	YPL127C	PIH1	P38768	344 aa		11.56	□□□□□ -0.56
HHO1	YPL127C	PNT1	P38969	423 aa		11.56	□□□□□ -0.56
HHO1	YPL127C	BRE2	P43132	505 aa		11.56	□□□□□ -0.56
HHO1	YPL127C	NET1	P47035	1189 aa		11.56	□□□□□ -0.56
HHO1	YPL127C	PTA1	Q01329	785 aa	Predicted RBP	11.56	□□□□□ -0.56
HHO1	YPL127C	HOS3	Q02959	697 aa	Known RBP	11.56	□□□□□ -0.56
HHO1	YPL127C	ISA1	Q07821	250 aa	Predicted RBP	11.56	□□□□□ -0.56
HHO1	YPL127C	TYW1	Q08960	810 aa	Known RBP	11.56	□□□□□ -0.56
HHO1	YPL127C	PGK1	P00560	416 aa	Known RBP	11.55	□□□□□ -0.56
HHO1	YPL127C	SRD1	P09007	221 aa		11.55	□□□□□ -0.56
HHO1	YPL127C	ESS1	P22696	170 aa		11.55	□□□□□ -0.56
HHO1	YPL127C	CDC60	P26637	1090 aa	Known RBP	11.55	□□□□□ -0.56
HHO1	YPL127C	SUV3	P32580	737 aa		11.55	□□□□□ -0.56
HHO1	YPL127C	UBP11	P36026	717 aa		11.55	□□□□□ -0.56
HHO1	YPL127C	MCR1	P36060	302 aa	Known RBP	11.55	□□□□□ -0.56
HHO1	YPL127C	VID30	P53076	958 aa		11.55	□□□□□ -0.56
HHO1	YPL127C	YAF9	P53930	226 aa		11.55	□□□□□ -0.56
HHO1	YPL127C	YLR287C	Q05881	355 aa		11.55	□□□□□ -0.56
HHO1	YPL127C	NOP58	Q12499	511 aa	Known RBP	11.55	□□□□□ -0.56
HHO1	YPL127C	SUP45	P12385	437 aa	Known RBP	11.54	□□□□□ -0.56
HHO1	YPL127C	PRP22	P24384	1145 aa	Known RBP	11.54	□□□□□ -0.56
HHO1	YPL127C	GPB2	P39717	880 aa		11.54	□□□□□ -0.56
HHO1	YPL127C	TOS3	P43637	560 aa		11.54	□□□□□ -0.56
HHO1	YPL127C	HFM1	P51979	1187 aa		11.54	□□□□□ -0.56
HHO1	YPL127C	DIP5	P53388	608 aa		11.54	□□□□□ -0.56
HHO1	YPL127C	SPO75	Q07798	868 aa		11.54	□□□□□ -0.56
HHO1	YPL127C	NEW1	Q08972	1196 aa	Known RBP	11.54	□□□□□ -0.56
HHO1	YPL127C	RRP6	Q12149	733 aa	Known RBP	11.54	□□□□□ -0.56
HHO1	YPL127C	MED1	Q12321	566 aa		11.54	□□□□□ -0.56
HHO1	YPL127C	PCK1	P10963	549 aa		11.53	□□□□□ -0.56
HHO1	YPL127C	VMA2	P16140	517 aa	Known RBP	11.53	□□□□□ -0.56
HHO1	YPL127C	APL1	P27351	700 aa		11.53	□□□□□ -0.56
HHO1	YPL127C	CLB5	P30283	435 aa		11.53	□□□□□ -0.56
HHO1	YPL127C	MRF1	P30775	413 aa	Predicted RBP	11.53	□□□□□ -0.56
HHO1	YPL127C	VFA1	P40080	203 aa		11.53	□□□□□ -0.56
HHO1	YPL127C	YAP5	P40574	245 aa		11.53	□□□□□ -0.56
HHO1	YPL127C	CEP3	P40969	608 aa		11.53	□□□□□ -0.56
HHO1	YPL127C	OSW7	P43611	510 aa		11.53	□□□□□ -0.56
HHO1	YPL127C	PEX29	Q03370	554 aa		11.53	□□□□□ -0.56
HHO1	YPL127C	CUR1	Q06469	252 aa		11.53	□□□□□ -0.56
HHO1	YPL127C	YDL057W	Q07379	328 aa		11.53	□□□□□ -0.56
HHO1	YPL127C	YPL216W	Q08964	1102 aa		11.53	□□□□□ -0.56
HHO1	YPL127C	YPL277C	Q08989	487 aa		11.53	□□□□□ -0.56
HHO1	YPL127C	CDC19	P00549	500 aa	Known RBP	11.52	□□□□□ -0.57
HHO1	YPL127C	PET111	P08468	800 aa		11.52	□□□□□ -0.57
HHO1	YPL127C	RPC25	P35718	212 aa		11.52	□□□□□ -0.57
HHO1	YPL127C	MCD4	P36051	919 aa		11.52	□□□□□ -0.57
HHO1	YPL127C	CAJ1	P39101	391 aa		11.52	□□□□□ -0.57
HHO1	YPL127C	BIM1	P40013	344 aa		11.52	□□□□□ -0.57
HHO1	YPL127C	RPN3	P40016	523 aa	Known RBP	11.52	□□□□□ -0.57
HHO1	YPL127C	FIS1	P40515	155 aa		11.52	□□□□□ -0.57
HHO1	YPL127C	ULP2	P40537	1034 aa	Predicted RBP	11.52	□□□□□ -0.57
HHO1	YPL127C	NBP1	P52919	319 aa	Predicted RBP	11.52	□□□□□ -0.57
HHO1	YPL127C	ZPR1	P53303	486 aa	Known RBP	11.52	□□□□□ -0.57
HHO1	YPL127C	FKS1	P38631	1876 aa	Known RBP	11.52	□□□□□ -0.57
HHO1	YPL127C	SSB1	P11484	613 aa	Known RBP	11.51	□□□□□ -0.57
HHO1	YPL127C	SEC23	P15303	768 aa	Known RBP	11.51	□□□□□ -0.57
HHO1	YPL127C	UTR4	P32626	227 aa		11.51	□□□□□ -0.57
HHO1	YPL127C	CCC2	P38995	1004 aa		11.51	□□□□□ -0.57
HHO1	YPL127C	UBP5	P39944	805 aa		11.51	□□□□□ -0.57
HHO1	YPL127C	SSB2	P40150	613 aa	Known RBP	11.51	□□□□□ -0.57
HHO1	YPL127C	YIL089W	P40500	205 aa		11.51	□□□□□ -0.57
HHO1	YPL127C	PEX21	P50091	288 aa		11.51	□□□□□ -0.57
HHO1	YPL127C	HUL5	P53119	910 aa		11.51	□□□□□ -0.57
HHO1	YPL127C	ERG5	P54781	538 aa		11.51	□□□□□ -0.57
HHO1	YPL127C	VPS60	Q03390	229 aa		11.51	□□□□□ -0.57
HHO1	YPL127C	UTP5	Q04177	643 aa	Known RBP	11.51	□□□□□ -0.57
HHO1	YPL127C	DUS3	Q06053	668 aa	Known RBP	11.51	□□□□□ -0.57
HHO1	YPL127C	CWC2	Q12046	339 aa	Predicted RBP	11.51	□□□□□ -0.57
HHO1	YPL127C	RKM4	Q12504	494 aa		11.51	□□□□□ -0.57
HHO1	YPL127C	TCP1	P12612	559 aa	Known RBP	11.5	□□□□□ -0.57
HHO1	YPL127C	DAL7	P21826	554 aa		11.5	□□□□□ -0.57
HHO1	YPL127C	RRP43	P25359	394 aa	Predicted RBP	11.5	□□□□□ -0.57
HHO1	YPL127C	PGM2	P37012	569 aa	Known RBP	11.5	□□□□□ -0.57
HHO1	YPL127C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	11.5	□□□□□ -0.57	not detected
HHO1	YPL127C	APT1	P49435	187 aa	Known RBP	11.5	□□□□□ -0.57
HHO1	YPL127C	UME1	Q03010	460 aa		11.5	□□□□□ -0.57
HHO1	YPL127C	CFT2	Q12102	859 aa	Predicted RBP	11.5	□□□□□ -0.57
HHO1	YPL127C	SPO12	P17123	173 aa		11.49	□□□□□ -0.57
HHO1	YPL127C	PET123	P17558	318 aa		11.49	□□□□□ -0.57
HHO1	YPL127C	PKC1	P24583	1151 aa		11.49	□□□□□ -0.57
HHO1	YPL127C	TRK2	P28584	889 aa		11.49	□□□□□ -0.57
HHO1	YPL127C	SHP1	P34223	423 aa		11.49	□□□□□ -0.57
HHO1	YPL127C	UBP13	P38187	747 aa		11.49	□□□□□ -0.57
HHO1	YPL127C	SMC2	P38989	1170 aa	Known RBP	11.49	□□□□□ -0.57
HHO1	YPL127C	HMF1	P40037	129 aa	Known RBP	11.49	□□□□□ -0.57
HHO1	YPL127C	SHQ1	P40486	507 aa	Predicted RBP	11.49	□□□□□ -0.57
HHO1	YPL127C	CAF130	P53280	1122 aa	Predicted RBP	11.49	□□□□□ -0.57
HHO1	YPL127C	CRD1	Q07560	283 aa		11.49	□□□□□ -0.57
HHO1	YPL127C	RPL17A	P05740	184 aa	Known RBP	11.48	□□□□□ -0.57
HHO1	YPL127C	PPR1	P07272	904 aa	Predicted RBP	11.48	□□□□□ -0.57
HHO1	YPL127C	SEC8	P32855	1065 aa		11.48	□□□□□ -0.57
HHO1	YPL127C	STO1	P34160	861 aa	Known RBP	11.48	□□□□□ -0.57
HHO1	YPL127C	ATG3	P40344	310 aa		11.48	□□□□□ -0.57
HHO1	YPL127C	RPL17B	P46990	184 aa	Known RBP	11.48	□□□□□ -0.57

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms