RNA–Protein interactions for RNA: YKR039W

GAP1, Transcript of General amino acid permease, yeastyeast

Gene GAP1, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GAP1YKR039W SHP1P34223 423 aa10.85□□□□□ -0.67
GAP1YKR039W UBP11P36026 717 aa10.85□□□□□ -0.67
GAP1YKR039W SHM1P37292 490 aaPredicted RBP10.85□□□□□ -0.67
GAP1YKR039W MIP6P38760 659 aaKnown RBP10.85□□□□□ -0.67
GAP1YKR039W RTT107P38850 1070 aa10.85□□□□□ -0.67
GAP1YKR039W GPD2P41911 440 aaKnown RBP10.85□□□□□ -0.67
GAP1YKR039W PTA1Q01329 785 aaPredicted RBP10.85□□□□□ -0.67
GAP1YKR039W DUS3Q06053 668 aaKnown RBP10.85□□□□□ -0.67
GAP1YKR039W PGK1P00560 416 aaKnown RBP10.84□□□□□ -0.67
GAP1YKR039W SRD1P09007 221 aa10.84□□□□□ -0.67
GAP1YKR039W SPO11P23179 398 aa10.84□□□□□ -0.67
GAP1YKR039W UTR4P32626 227 aa10.84□□□□□ -0.67
GAP1YKR039W PCS60P38137 543 aaKnown RBP RIP-Chip data10.84□□□□□ -0.67not detected
GAP1YKR039W APL4Q12028 832 aa10.84□□□□□ -0.67
GAP1YKR039W CLB5P30283 435 aa10.84□□□□□ -0.67
GAP1YKR039W SUV3P32580 737 aa10.84□□□□□ -0.67
GAP1YKR039W GPB2P39717 880 aa10.84□□□□□ -0.67
GAP1YKR039W ULP2P40537 1034 aaPredicted RBP10.84□□□□□ -0.67
GAP1YKR039W HUL4P40985 892 aa10.84□□□□□ -0.67
GAP1YKR039W YFL034WP43564 1073 aa10.84□□□□□ -0.67
GAP1YKR039W ISA1Q07821 250 aaPredicted RBP10.84□□□□□ -0.67
GAP1YKR039W CFT2Q12102 859 aaPredicted RBP10.84□□□□□ -0.67
GAP1YKR039W MAK16P10962 306 aaPredicted RBP10.83□□□□□ -0.68
GAP1YKR039W PRP22P24384 1145 aaKnown RBP10.83□□□□□ -0.68
GAP1YKR039W BIM1P40013 344 aa10.83□□□□□ -0.68
GAP1YKR039W TOS3P43637 560 aa10.83□□□□□ -0.68
GAP1YKR039W YAF9P53930 226 aa10.83□□□□□ -0.68
GAP1YKR039W COG4Q06096 861 aa10.83□□□□□ -0.68
GAP1YKR039W SPO75Q07798 868 aa10.83□□□□□ -0.68
GAP1YKR039W RPC25P35718 212 aa10.82□□□□□ -0.68
GAP1YKR039W OSW7P43611 510 aa10.82□□□□□ -0.68
GAP1YKR039W JSN1P47135 1091 aaKnown RBP RIP-Chip data10.82□□□□□ -0.68not detected
GAP1YKR039W CTR1P49573 406 aa10.82□□□□□ -0.68
GAP1YKR039W HUL5P53119 910 aa10.82□□□□□ -0.68
GAP1YKR039W YLR287CQ05881 355 aa10.82□□□□□ -0.68
GAP1YKR039W YDL057WQ07379 328 aa10.82□□□□□ -0.68
GAP1YKR039W TCO89Q08921 799 aa10.82□□□□□ -0.68
GAP1YKR039W ATG9Q12142 997 aa10.82□□□□□ -0.68
GAP1YKR039W CDC19P00549 500 aaKnown RBP10.81□□□□□ -0.68
GAP1YKR039W RPC53P25441 422 aa10.81□□□□□ -0.68
GAP1YKR039W EFM2P38347 419 aa10.81□□□□□ -0.68
GAP1YKR039W RPN3P40016 523 aaKnown RBP10.81□□□□□ -0.68
GAP1YKR039W CRD1Q07560 283 aa10.81□□□□□ -0.68
GAP1YKR039W FKS1P38631 1876 aaKnown RBP10.81□□□□□ -0.68
GAP1YKR039W SSA4P22202 642 aaKnown RBP10.81□□□□□ -0.68
GAP1YKR039W CAB3P36076 571 aa10.81□□□□□ -0.68
GAP1YKR039W PCH2P38126 564 aa10.81□□□□□ -0.68
GAP1YKR039W NBP1P52919 319 aaPredicted RBP10.81□□□□□ -0.68
GAP1YKR039W ZPR1P53303 486 aaKnown RBP10.81□□□□□ -0.68
GAP1YKR039W RRP6Q12149 733 aaKnown RBP10.81□□□□□ -0.68
GAP1YKR039W FIS1P40515 155 aa10.8□□□□□ -0.68
GAP1YKR039W HFM1P51979 1187 aa10.8□□□□□ -0.68
GAP1YKR039W VID30P53076 958 aa10.8□□□□□ -0.68
GAP1YKR039W YGL039WP53183 348 aaKnown RBP10.8□□□□□ -0.68
GAP1YKR039W YGR125WP53273 1036 aa10.8□□□□□ -0.68
GAP1YKR039W YPL277CQ08989 487 aa10.8□□□□□ -0.68
GAP1YKR039W HMI1Q12039 706 aa10.8□□□□□ -0.68
GAP1YKR039W CWC2Q12046 339 aaPredicted RBP10.8□□□□□ -0.68
GAP1YKR039W MED1Q12321 566 aa10.8□□□□□ -0.68
GAP1YKR039W DAL7P21826 554 aa10.79□□□□□ -0.68
GAP1YKR039W PKC1P24583 1151 aa10.79□□□□□ -0.68
GAP1YKR039W RRP43P25359 394 aaPredicted RBP10.79□□□□□ -0.68
GAP1YKR039W CDC60P26637 1090 aaKnown RBP10.79□□□□□ -0.68
GAP1YKR039W MRF1P30775 413 aaPredicted RBP10.79□□□□□ -0.68
GAP1YKR039W TOF1P53840 1238 aa10.79□□□□□ -0.68
GAP1YKR039W SVF1Q05515 481 aa10.79□□□□□ -0.68
GAP1YKR039W VPS38Q05919 439 aa10.79□□□□□ -0.68
GAP1YKR039W PCK1P10963 549 aa10.79□□□□□ -0.68
GAP1YKR039W TKL1P23254 680 aaKnown RBP10.79□□□□□ -0.68
GAP1YKR039W TRK2P28584 889 aa10.79□□□□□ -0.68
GAP1YKR039W EUG1P32474 517 aa10.79□□□□□ -0.68
GAP1YKR039W PGM2P37012 569 aaKnown RBP10.79□□□□□ -0.68
GAP1YKR039W VFA1P40080 203 aa10.79□□□□□ -0.68
GAP1YKR039W ALF1P53904 254 aa10.79□□□□□ -0.68
GAP1YKR039W PLP2Q12017 286 aa10.79□□□□□ -0.68
GAP1YKR039W IXR1P33417 597 aa10.78□□□□□ -0.68
GAP1YKR039W REG2P38232 338 aa10.78□□□□□ -0.68
GAP1YKR039W UBP15P50101 1230 aa10.78□□□□□ -0.68
GAP1YKR039W NCS2P53923 493 aaPredicted RBP10.78□□□□□ -0.68
GAP1YKR039W ERP3Q12403 225 aa10.78□□□□□ -0.68
GAP1YKR039W SSB1P11484 613 aaKnown RBP10.77□□□□□ -0.68
GAP1YKR039W TCP1P12612 559 aaKnown RBP10.77□□□□□ -0.68
GAP1YKR039W APL1P27351 700 aa10.77□□□□□ -0.68
GAP1YKR039W UBP13P38187 747 aa10.77□□□□□ -0.68
GAP1YKR039W BSD2P38356 321 aa10.77□□□□□ -0.68
GAP1YKR039W VPS29P38759 282 aa10.77□□□□□ -0.68
GAP1YKR039W UBP5P39944 805 aa10.77□□□□□ -0.68
GAP1YKR039W SSB2P40150 613 aaKnown RBP10.77□□□□□ -0.68
GAP1YKR039W UME1Q03010 460 aa10.77□□□□□ -0.68
GAP1YKR039W JIP4Q03361 876 aa10.77□□□□□ -0.68
GAP1YKR039W RBA50Q04418 439 aa10.77□□□□□ -0.68
GAP1YKR039W SEC8P32855 1065 aa10.77□□□□□ -0.69
GAP1YKR039W HMF1P40037 129 aaKnown RBP10.77□□□□□ -0.69
GAP1YKR039W CCM1P48237 864 aaPredicted RBP10.77□□□□□ -0.69
GAP1YKR039W ARK1P53974 638 aa10.77□□□□□ -0.69
GAP1YKR039W ERG5P54781 538 aa10.77□□□□□ -0.69
GAP1YKR039W SLD5Q03406 294 aa10.77□□□□□ -0.69
GAP1YKR039W CUR1Q06469 252 aa10.77□□□□□ -0.69
GAP1YKR039W HVG1P0CE11 249 aa10.76□□□□□ -0.69
GAP1YKR039W ATG19P35193 415 aa10.76□□□□□ -0.69
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms