RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C TCD1P38756 429 aa8.41□□□□□ -1.06
SNP1YIL061C PIH1P38768 344 aa8.41□□□□□ -1.06
SNP1YIL061C BIM1P40013 344 aa8.41□□□□□ -1.06
SNP1YIL061C ATG3P40344 310 aa8.41□□□□□ -1.06
SNP1YIL061C LIF1P53150 421 aa8.41□□□□□ -1.06
SNP1YIL061C CAF130P53280 1122 aaPredicted RBP8.41□□□□□ -1.06
SNP1YIL061C PGA2P53903 129 aa8.41□□□□□ -1.06
SNP1YIL061C VPS60Q03390 229 aa8.41□□□□□ -1.06
SNP1YIL061C YML037CQ03703 340 aa8.41□□□□□ -1.06
SNP1YIL061C YLR287CQ05881 355 aa8.41□□□□□ -1.06
SNP1YIL061C YLR326WQ06170 240 aaKnown RBP8.41□□□□□ -1.06
SNP1YIL061C CWC2Q12046 339 aaPredicted RBP8.41□□□□□ -1.06
SNP1YIL061C RRP6Q12149 733 aaKnown RBP8.41□□□□□ -1.06
SNP1YIL061C PFK1P16861 987 aaKnown RBP8.4□□□□□ -1.06
SNP1YIL061C SPO12P17123 173 aa8.4□□□□□ -1.06
SNP1YIL061C PET123P17558 318 aa8.4□□□□□ -1.06
SNP1YIL061C UBC1P21734 215 aaKnown RBP8.4□□□□□ -1.06
SNP1YIL061C PRP22P24384 1145 aaKnown RBP8.4□□□□□ -1.06
SNP1YIL061C RPC53P25441 422 aa8.4□□□□□ -1.06
SNP1YIL061C PGM1P33401 570 aaKnown RBP8.4□□□□□ -1.06
SNP1YIL061C STO1P34160 861 aaKnown RBP8.4□□□□□ -1.06
SNP1YIL061C TGL1P34163 548 aa8.4□□□□□ -1.06
SNP1YIL061C CAJ1P39101 391 aa8.4□□□□□ -1.06
SNP1YIL061C UBP5P39944 805 aa8.4□□□□□ -1.06
SNP1YIL061C SHQ1P40486 507 aaPredicted RBP8.4□□□□□ -1.06
SNP1YIL061C GPD2P41911 440 aaKnown RBP8.4□□□□□ -1.06
SNP1YIL061C TOS3P43637 560 aa8.4□□□□□ -1.06
SNP1YIL061C TMA64Q04600 565 aaKnown RBP8.4□□□□□ -1.06
SNP1YIL061C YDL057WQ07379 328 aa8.4□□□□□ -1.06
SNP1YIL061C GUD1Q07729 489 aa8.4□□□□□ -1.06
SNP1YIL061C SPO75Q07798 868 aa8.4□□□□□ -1.06
SNP1YIL061C PLP2Q12017 286 aa8.4□□□□□ -1.06
SNP1YIL061C AIM7Q12156 149 aa8.4□□□□□ -1.06
SNP1YIL061C MCM16Q12262 181 aa8.4□□□□□ -1.06
SNP1YIL061C PPR1P07272 904 aaPredicted RBP8.39□□□□□ -1.07
SNP1YIL061C PER1P25625 357 aa8.39□□□□□ -1.07
SNP1YIL061C CDC60P26637 1090 aaKnown RBP8.39□□□□□ -1.07
SNP1YIL061C MCX1P38323 520 aaPredicted RBP8.39□□□□□ -1.07
SNP1YIL061C SEC9P40357 651 aa8.39□□□□□ -1.07
SNP1YIL061C EFM4P40516 257 aa8.39□□□□□ -1.07
SNP1YIL061C CNM67P53865 581 aaKnown RBP8.39□□□□□ -1.07
SNP1YIL061C BOP3P53958 396 aa8.39□□□□□ -1.07
SNP1YIL061C ALD6P54115 500 aaKnown RBP8.39□□□□□ -1.07
SNP1YIL061C UME1Q03010 460 aa8.39□□□□□ -1.07
SNP1YIL061C THS1P04801 734 aaKnown RBP8.38□□□□□ -1.07
SNP1YIL061C SRD1P09007 221 aa8.38□□□□□ -1.07
SNP1YIL061C ESS1P22696 170 aa8.38□□□□□ -1.07
SNP1YIL061C APL1P27351 700 aa8.38□□□□□ -1.07
SNP1YIL061C UBP11P36026 717 aa8.38□□□□□ -1.07
SNP1YIL061C YAP5P40574 245 aa8.38□□□□□ -1.07
SNP1YIL061C YFL034WP43564 1073 aa8.38□□□□□ -1.07
SNP1YIL061C NBP1P52919 319 aaPredicted RBP8.38□□□□□ -1.07
SNP1YIL061C DIP5P53388 608 aa8.38□□□□□ -1.07
SNP1YIL061C UTP5Q04177 643 aaKnown RBP8.38□□□□□ -1.07
SNP1YIL061C SML1Q04964 104 aa8.38□□□□□ -1.07
SNP1YIL061C PHM6Q05637 104 aa8.38□□□□□ -1.07
SNP1YIL061C SPH1Q06160 661 aa8.38□□□□□ -1.07
SNP1YIL061C MED1Q12321 566 aa8.38□□□□□ -1.07
SNP1YIL061C YOL098CQ12496 1037 aa8.38□□□□□ -1.07
SNP1YIL061C FBP1P09201 348 aa8.37□□□□□ -1.07
SNP1YIL061C MTF2P10849 440 aa8.37□□□□□ -1.07
SNP1YIL061C PCK1P10963 549 aa8.37□□□□□ -1.07
SNP1YIL061C SSB1P11484 613 aaKnown RBP8.37□□□□□ -1.07
SNP1YIL061C SUP45P12385 437 aaKnown RBP8.37□□□□□ -1.07
SNP1YIL061C CLN3P13365 580 aa8.37□□□□□ -1.07
SNP1YIL061C PDC6P26263 563 aaKnown RBP8.37□□□□□ -1.07
SNP1YIL061C DPB3P27344 201 aa8.37□□□□□ -1.07
SNP1YIL061C TRK2P28584 889 aa8.37□□□□□ -1.07
SNP1YIL061C SUV3P32580 737 aa8.37□□□□□ -1.07
SNP1YIL061C BUD16P39988 312 aa8.37□□□□□ -1.07
SNP1YIL061C SSB2P40150 613 aaKnown RBP8.37□□□□□ -1.07
SNP1YIL061C VID30P53076 958 aa8.37□□□□□ -1.07
SNP1YIL061C MAL13P53338 473 aa8.37□□□□□ -1.07
SNP1YIL061C PTA1Q01329 785 aaPredicted RBP8.37□□□□□ -1.07
SNP1YIL061C UBX5Q06682 500 aa8.37□□□□□ -1.07
SNP1YIL061C YPL277CQ08989 487 aa8.37□□□□□ -1.07
SNP1YIL061C PGK1P00560 416 aaKnown RBP8.36□□□□□ -1.07
SNP1YIL061C TUP1P16649 713 aa8.36□□□□□ -1.07
SNP1YIL061C DAL7P21826 554 aa8.36□□□□□ -1.07
SNP1YIL061C RAD57P25301 460 aa8.36□□□□□ -1.07
SNP1YIL061C YEL043WP32618 956 aa8.36□□□□□ -1.07
SNP1YIL061C OCT1P35999 772 aa8.36□□□□□ -1.07
SNP1YIL061C PGM2P37012 569 aaKnown RBP8.36□□□□□ -1.07
SNP1YIL061C IES1P43579 692 aa8.36□□□□□ -1.07
SNP1YIL061C YJL007CP47080 104 aa8.36□□□□□ -1.07
SNP1YIL061C CUR1Q06469 252 aa8.36□□□□□ -1.07
SNP1YIL061C VAC14Q06708 880 aa8.36□□□□□ -1.07
SNP1YIL061C FKS1P38631 1876 aaKnown RBP8.36□□□□□ -1.07
SNP1YIL061C TY1B-AO13527 1196 aaKnown RBP8.35□□□□□ -1.07
SNP1YIL061C SAM1P10659 382 aaKnown RBP8.35□□□□□ -1.07
SNP1YIL061C MRF1P30775 413 aaPredicted RBP8.35□□□□□ -1.07
SNP1YIL061C HXT1P32465 570 aa8.35□□□□□ -1.07
SNP1YIL061C LTV1P34078 463 aa8.35□□□□□ -1.07
SNP1YIL061C RRP1P35178 278 aaPredicted RBP8.35□□□□□ -1.07
SNP1YIL061C SMC2P38989 1170 aaKnown RBP8.35□□□□□ -1.07
SNP1YIL061C PEA2P40091 420 aa8.35□□□□□ -1.07
SNP1YIL061C NDC80P40460 691 aa8.35□□□□□ -1.07
SNP1YIL061C FIS1P40515 155 aa8.35□□□□□ -1.07
SNP1YIL061C ULP2P40537 1034 aaPredicted RBP8.35□□□□□ -1.07
SNP1YIL061C CCM1P48237 864 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms