RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W ATG1P53104 897 aa15.31■□□□□ 0.04
RPN10YHR200W GUP1P53154 560 aa15.31■□□□□ 0.04
RPN10YHR200W ESS1P22696 170 aa15.3■□□□□ 0.04
RPN10YHR200W MCM2P29469 868 aa15.3■□□□□ 0.04
RPN10YHR200W REG2P38232 338 aa15.3■□□□□ 0.04
RPN10YHR200W RPN3P40016 523 aaKnown RBP15.3■□□□□ 0.04
RPN10YHR200W MGA2P40578 1113 aa15.3■□□□□ 0.04
RPN10YHR200W YFL034WP43564 1073 aa15.3■□□□□ 0.04
RPN10YHR200W VPS53P47061 822 aa15.3■□□□□ 0.04
RPN10YHR200W YGR237CP50089 785 aa15.3■□□□□ 0.04
RPN10YHR200W UBP15P50101 1230 aa15.3■□□□□ 0.04
RPN10YHR200W SLD5Q03406 294 aa15.3■□□□□ 0.04
RPN10YHR200W ERP3Q12403 225 aa15.3■□□□□ 0.04
RPN10YHR200W FKS1P38631 1876 aaKnown RBP15.29■□□□□ 0.04
RPN10YHR200W MAK16P10962 306 aaPredicted RBP15.29■□□□□ 0.04
RPN10YHR200W SUP45P12385 437 aaKnown RBP15.29■□□□□ 0.04
RPN10YHR200W TCP1P12612 559 aaKnown RBP15.29■□□□□ 0.04
RPN10YHR200W PRP22P24384 1145 aaKnown RBP15.29■□□□□ 0.04
RPN10YHR200W MRC1P25588 1096 aa15.29■□□□□ 0.04
RPN10YHR200W SPC110P32380 944 aa15.29■□□□□ 0.04
RPN10YHR200W TFC4P33339 1025 aa15.29■□□□□ 0.04
RPN10YHR200W UBP11P36026 717 aa15.29■□□□□ 0.04
RPN10YHR200W PPS1P38148 807 aa15.29■□□□□ 0.04
RPN10YHR200W FIS1P40515 155 aa15.29■□□□□ 0.04
RPN10YHR200W BRE2P43132 505 aa15.29■□□□□ 0.04
RPN10YHR200W FYV8P46949 817 aaKnown RBP15.29■□□□□ 0.04
RPN10YHR200W YKL091CP33324 310 aaKnown RBP15.28■□□□□ 0.04
RPN10YHR200W MOT2P34909 587 aaKnown RBP15.28■□□□□ 0.04
RPN10YHR200W PSY4P38193 441 aa15.28■□□□□ 0.04
RPN10YHR200W VID30P53076 958 aa15.28■□□□□ 0.04
RPN10YHR200W DIP5P53388 608 aa15.28■□□□□ 0.04
RPN10YHR200W EBS1Q03466 884 aaKnown RBP15.28■□□□□ 0.04
RPN10YHR200W TMA16Q08687 178 aa15.28■□□□□ 0.04
RPN10YHR200W SRF1Q12516 437 aa15.28■□□□□ 0.04
RPN10YHR200W PCK1P10963 549 aa15.27■□□□□ 0.04
RPN10YHR200W RGT1P32862 1170 aa15.27■□□□□ 0.04
RPN10YHR200W VPS75P53853 264 aa15.27■□□□□ 0.04
RPN10YHR200W CYC8P14922 966 aa15.26■□□□□ 0.03
RPN10YHR200W RPC53P25441 422 aa15.26■□□□□ 0.03
RPN10YHR200W PSO2P30620 661 aa15.26■□□□□ 0.03
RPN10YHR200W TIM23P32897 222 aa15.26■□□□□ 0.03
RPN10YHR200W TVP38P36164 337 aa15.26■□□□□ 0.03
RPN10YHR200W MXR1P40029 184 aa15.26■□□□□ 0.03
RPN10YHR200W MDR1P53258 950 aa15.26■□□□□ 0.03
RPN10YHR200W NCS2P53923 493 aaPredicted RBP15.26■□□□□ 0.03
RPN10YHR200W YLR225CQ05948 407 aaKnown RBP15.26■□□□□ 0.03
RPN10YHR200W DUS4Q06063 367 aa15.26■□□□□ 0.03
RPN10YHR200W MRF1P30775 413 aaPredicted RBP15.25■□□□□ 0.03
RPN10YHR200W VPS35P34110 944 aa15.25■□□□□ 0.03
RPN10YHR200W ATG19P35193 415 aa15.25■□□□□ 0.03
RPN10YHR200W CTM1P38818 585 aa15.25■□□□□ 0.03
RPN10YHR200W SPT8P38915 602 aa15.25■□□□□ 0.03
RPN10YHR200W AIP1P46680 615 aaKnown RBP15.25■□□□□ 0.03
RPN10YHR200W LSC2P53312 427 aa15.25■□□□□ 0.03
RPN10YHR200W COG4Q06096 861 aa15.25■□□□□ 0.03
RPN10YHR200W CUR1Q06469 252 aa15.25■□□□□ 0.03
RPN10YHR200W SMC5Q08204 1093 aa15.25■□□□□ 0.03
RPN10YHR200W MET7Q08645 548 aa15.25■□□□□ 0.03
RPN10YHR200W MSC6Q08818 692 aaKnown RBP15.25■□□□□ 0.03
RPN10YHR200W MED1Q12321 566 aa15.25■□□□□ 0.03
RPN10YHR200W MSH3P25336 1018 aa15.24■□□□□ 0.03
RPN10YHR200W UBP13P38187 747 aa15.24■□□□□ 0.03
RPN10YHR200W LEO1P38439 464 aa15.24■□□□□ 0.03
RPN10YHR200W ESC2Q06340 456 aa15.24■□□□□ 0.03
RPN10YHR200W YET1P35723 206 aa15.23■□□□□ 0.03
RPN10YHR200W HUL4P40985 892 aa15.23■□□□□ 0.03
RPN10YHR200W TOS3P43637 560 aa15.23■□□□□ 0.03
RPN10YHR200W YAP7Q08182 245 aa15.23■□□□□ 0.03
RPN10YHR200W TCO89Q08921 799 aa15.23■□□□□ 0.03
RPN10YHR200W YPL277CQ08989 487 aa15.23■□□□□ 0.03
RPN10YHR200W TFC8Q12308 588 aa15.23■□□□□ 0.03
RPN10YHR200W DBP5P20449 482 aaKnown RBP15.22■□□□□ 0.03
RPN10YHR200W CDC48P25694 835 aaKnown RBP15.22■□□□□ 0.03
RPN10YHR200W PHO13P19881 312 aa15.21■□□□□ 0.03
RPN10YHR200W YEL025CP39991 1188 aa15.21■□□□□ 0.03
RPN10YHR200W BIM1P40013 344 aa15.21■□□□□ 0.03
RPN10YHR200W YLL058WQ12198 575 aa15.21■□□□□ 0.03
RPN10YHR200W TRM11Q12463 433 aa15.21■□□□□ 0.03
RPN10YHR200W DBP7P36120 742 aaKnown RBP15.2■□□□□ 0.02
RPN10YHR200W CCM1P48237 864 aaPredicted RBP15.2■□□□□ 0.02
RPN10YHR200W NBP1P52919 319 aaPredicted RBP15.2■□□□□ 0.02
RPN10YHR200W YGL039WP53183 348 aaKnown RBP15.2■□□□□ 0.02
RPN10YHR200W TOF1P53840 1238 aa15.2■□□□□ 0.02
RPN10YHR200W YCG1Q06680 1035 aa15.2■□□□□ 0.02
RPN10YHR200W YPL216WQ08964 1102 aa15.2■□□□□ 0.02
RPN10YHR200W PHO8P11491 566 aa15.19■□□□□ 0.02
RPN10YHR200W SPO11P23179 398 aa15.19■□□□□ 0.02
RPN10YHR200W ULP2P40537 1034 aaPredicted RBP15.19■□□□□ 0.02
RPN10YHR200W COS5P47187 383 aa15.19■□□□□ 0.02
RPN10YHR200W CTR1P49573 406 aa15.19■□□□□ 0.02
RPN10YHR200W PLP2Q12017 286 aa15.19■□□□□ 0.02
RPN10YHR200W PDC1P06169 563 aaKnown RBP15.18■□□□□ 0.02
RPN10YHR200W PRE10P21242 288 aaKnown RBP RIP-Chip data15.18■□□□□ 0.02not detected
RPN10YHR200W APL1P27351 700 aa15.18■□□□□ 0.02
RPN10YHR200W YSC83P32792 385 aa15.18■□□□□ 0.02
RPN10YHR200W MIP6P38760 659 aaKnown RBP15.18■□□□□ 0.02
RPN10YHR200W SWI6P09959 803 aa15.17■□□□□ 0.02
RPN10YHR200W EFM2P38347 419 aa15.17■□□□□ 0.02
RPN10YHR200W SMC3P47037 1230 aa15.17■□□□□ 0.02
RPN10YHR200W GIR2Q03768 265 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms