Protein–RNA interactions for Protein: Q05948

YLR225C, Uncharacterized SVF1-like protein YLR225C, yeastyeast

Known RBP Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR225CQ05948 YML009W-BYML009W-B 477 nt23.35■■□□□ 1.33
YLR225CQ05948 NOP1YDL014W 984 nt22.99■■□□□ 1.27
YLR225CQ05948 NSR1YGR159C 1245 nt22.6■■□□□ 1.21
YLR225CQ05948 YKL036CYKL036C 393 nt21.83■■□□□ 1.09
YLR225CQ05948 YJL027CYJL027C 417 nt20.52■□□□□ 0.88
YLR225CQ05948 Q0297Q0297 156 nt20.31■□□□□ 0.84
YLR225CQ05948 SCS3YGL126W 1143 nt20.2■□□□□ 0.82
YLR225CQ05948 SRX1YKL086W 384 nt20.06■□□□□ 0.8
YLR225CQ05948 MDJ1YFL016C 1536 nt19.42■□□□□ 0.7
YLR225CQ05948 YCR051WYCR051W 669 nt19.11■□□□□ 0.65
YLR225CQ05948 YOL085CYOL085C 342 nt18.88■□□□□ 0.61
YLR225CQ05948 SCJ1YMR214W 1134 nt18.75■□□□□ 0.59
YLR225CQ05948 PKP1YIL042C 1185 nt18.51■□□□□ 0.55
YLR225CQ05948 ATS1YAL020C 1002 nt18.26■□□□□ 0.51
YLR225CQ05948 RPP1BYDL130W 321 nt18.24■□□□□ 0.51
YLR225CQ05948 TRN1tP(UGG)A 72 nt17.73■□□□□ 0.43
YLR225CQ05948 SUF9tP(UGG)F 72 nt17.73■□□□□ 0.43
YLR225CQ05948 SUF8tP(UGG)H 72 nt17.73■□□□□ 0.43
YLR225CQ05948 tP(UGG)LtP(UGG)L 72 nt17.73■□□□□ 0.43
YLR225CQ05948 SUF7tP(UGG)M 72 nt17.73■□□□□ 0.43
YLR225CQ05948 tP(UGG)N1tP(UGG)N1 72 nt17.73■□□□□ 0.43
YLR225CQ05948 tP(UGG)N2tP(UGG)N2 72 nt17.73■□□□□ 0.43
YLR225CQ05948 tP(UGG)O1tP(UGG)O1 72 nt17.73■□□□□ 0.43
YLR225CQ05948 SUF11tP(UGG)O2 72 nt17.73■□□□□ 0.43
YLR225CQ05948 CCC1YLR220W 969 nt17.59■□□□□ 0.41
YLR225CQ05948 DBP2YNL112W 1641 nt17.42■□□□□ 0.38
YLR225CQ05948 SCR1SCR1 522 nt17.37■□□□□ 0.37
YLR225CQ05948 PET122YER153C 765 nt17.34■□□□□ 0.37
YLR225CQ05948 RTC3YHR087W 336 nt17.05■□□□□ 0.32
YLR225CQ05948 tP(UGG)O3tP(UGG)O3 72 nt17.01■□□□□ 0.31
YLR225CQ05948 RRN5YLR141W 1092 nt16.91■□□□□ 0.3
YLR225CQ05948 RSB1YOR049C 1065 nt16.79■□□□□ 0.28
YLR225CQ05948 PST2YDR032C 597 nt16.78■□□□□ 0.28
YLR225CQ05948 RVS167YDR388W 1449 nt16.62■□□□□ 0.25
YLR225CQ05948 YER088W-BYER088W-B 147 nt16.59■□□□□ 0.25
YLR225CQ05948 YKL097CYKL097C 411 nt16.51■□□□□ 0.23
YLR225CQ05948 YDJ1YNL064C 1230 nt16.45■□□□□ 0.22
YLR225CQ05948 YBR190WYBR190W 312 nt16.38■□□□□ 0.21
YLR225CQ05948 SHR5YOL110W 714 nt16.16■□□□□ 0.18
YLR225CQ05948 GAR1YHR089C 618 nt15.99■□□□□ 0.15
YLR225CQ05948 SHU1YHL006C 453 nt15.94■□□□□ 0.14
YLR225CQ05948 YOR139CYOR139C 393 nt15.68■□□□□ 0.1
YLR225CQ05948 YAL037C-BYAL037C-B 975 nt15.5■□□□□ 0.07
YLR225CQ05948 DEP1YAL013W 1218 nt15.49■□□□□ 0.07
YLR225CQ05948 NPL3YDR432W 1245 nt15.45■□□□□ 0.06
YLR225CQ05948 TIR1YER011W 765 nt15.41■□□□□ 0.06
YLR225CQ05948 YNL208WYNL208W 600 nt15.32■□□□□ 0.04
YLR225CQ05948 URN1YPR152C 1398 nt15.3■□□□□ 0.04
YLR225CQ05948 RPN10YHR200W 807 nt15.26■□□□□ 0.03
YLR225CQ05948 SSA1YAL005C 1929 nt15.06■□□□□ 0
YLR225CQ05948 tM(CAU)CtM(CAU)C 72 nt15.03■□□□□ -0
YLR225CQ05948 IMT4tM(CAU)E 72 nt15.03■□□□□ -0
YLR225CQ05948 IMT3tM(CAU)J3 72 nt15.03■□□□□ -0
YLR225CQ05948 IMT1tM(CAU)O1 72 nt15.03■□□□□ -0
YLR225CQ05948 IMT2tM(CAU)P 72 nt15.03■□□□□ -0
YLR225CQ05948 YOL037CYOL037C 354 nt15.01□□□□□ -0.01
YLR225CQ05948 YGR021WYGR021W 873 nt14.99□□□□□ -0.01
YLR225CQ05948 MNP1YGL068W 585 nt14.98□□□□□ -0.01
YLR225CQ05948 HOM6YJR139C 1080 nt14.95□□□□□ -0.02
YLR225CQ05948 SRB2YHR041C 633 nt14.92□□□□□ -0.02
YLR225CQ05948 OPI9YLR338W 858 nt14.92□□□□□ -0.02
YLR225CQ05948 WWM1YFL010C 636 nt14.84□□□□□ -0.03
YLR225CQ05948 MOT3YMR070W 1473 nt14.74□□□□□ -0.05
YLR225CQ05948 BSC6YOL137W 1494 nt14.74□□□□□ -0.05
YLR225CQ05948 RKM5YLR137W 1104 nt14.73□□□□□ -0.05
YLR225CQ05948 PUS2YGL063W 1113 nt14.7□□□□□ -0.06
YLR225CQ05948 SAH1YER043C 1350 nt14.65□□□□□ -0.06
YLR225CQ05948 YJR018WYJR018W 363 nt14.63□□□□□ -0.07
YLR225CQ05948 YFL021C-AYFL021C-A 855 nt14.61□□□□□ -0.07
YLR225CQ05948 YLR281CYLR281C 468 nt14.59□□□□□ -0.07
YLR225CQ05948 RPP2BYDR382W 333 nt14.55□□□□□ -0.08
YLR225CQ05948 PUN1YLR414C 792 nt14.52□□□□□ -0.09
YLR225CQ05948 YJR120WYJR120W 351 nt14.5□□□□□ -0.09
YLR225CQ05948 WHI5YOR083W 888 nt14.46□□□□□ -0.09
YLR225CQ05948 MRPL8YJL063C 717 nt14.4□□□□□ -0.1
YLR225CQ05948 BDH2YAL061W 1254 nt14.35□□□□□ -0.11
YLR225CQ05948 SSA3YBL075C 1950 nt14.34□□□□□ -0.11
YLR225CQ05948 FMP45YDL222C 930 nt14.33□□□□□ -0.12
YLR225CQ05948 PUT4YOR348C 1884 nt14.32□□□□□ -0.12
YLR225CQ05948 LSM3YLR438C-A 270 nt14.29□□□□□ -0.12
YLR225CQ05948 ARE1YCR048W 1833 nt14.27□□□□□ -0.12
YLR225CQ05948 YCH1YGR203W 447 nt14.23□□□□□ -0.13
YLR225CQ05948 DSK2YMR276W 1122 nt14.23□□□□□ -0.13
YLR225CQ05948 YPR011CYPR011C 981 nt14.21□□□□□ -0.13
YLR225CQ05948 PTC2YER089C 1395 nt14.21□□□□□ -0.14
YLR225CQ05948 ADO1YJR105W 1023 nt14.16□□□□□ -0.14
YLR225CQ05948 IMP2'YIL154C 1041 nt14.15□□□□□ -0.14
YLR225CQ05948 YLR236CYLR236C 324 nt14.15□□□□□ -0.14
YLR225CQ05948 UBX6YJL048C 1191 nt14.14□□□□□ -0.15
YLR225CQ05948 YHR049C-AYHR049C-A 297 nt14.12□□□□□ -0.15
YLR225CQ05948 Q0182Q0182 405 nt14.09□□□□□ -0.15
YLR225CQ05948 YEL076C-AYEL076C-A 651 nt14.04□□□□□ -0.16
YLR225CQ05948 YEL076CYEL076C 651 nt14.04□□□□□ -0.16
YLR225CQ05948 YLR464WYLR464W 651 nt14.04□□□□□ -0.16
YLR225CQ05948 INM2YDR287W 879 nt14.03□□□□□ -0.16
YLR225CQ05948 YBL100CYBL100C 315 nt14□□□□□ -0.17
YLR225CQ05948 TRM9YML014W 840 nt13.98□□□□□ -0.17
YLR225CQ05948 YLR154C-GYLR154C-G 150 nt13.97□□□□□ -0.17
YLR225CQ05948 POA1YBR022W 534 nt13.96□□□□□ -0.17
YLR225CQ05948 NAB2YGL122C 1578 nt13.92□□□□□ -0.18
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms