RNA–Protein interactions for RNA: ENST00000359446.9

LDLRAD4-201, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-201ENST00000359446 DCAF8L2P0C7V8 631 aa21.95■■□□□ 1.1
LDLRAD4-201ENST00000359446 SUPT5HO00267 1087 aaKnown RBP20.62■□□□□ 0.89
LDLRAD4-201ENST00000359446 EHMT2Q96KQ7 1210 aa20.37■□□□□ 0.85
LDLRAD4-201ENST00000359446 PELP1Q8IZL8 1130 aaKnown RBP20.37■□□□□ 0.85
LDLRAD4-201ENST00000359446 SHROOM4Q9ULL8 1493 aa20.18■□□□□ 0.82
LDLRAD4-201ENST00000359446 APLP2Q06481 763 aa20.04■□□□□ 0.8
LDLRAD4-201ENST00000359446 FAM9AQ8IZU1 332 aaPredicted RBP19.85■□□□□ 0.77
LDLRAD4-201ENST00000359446 NISCHQ9Y2I1 1504 aa19.82■□□□□ 0.76
LDLRAD4-201ENST00000359446 TTBK1Q5TCY1 1321 aaPredicted RBP19.7■□□□□ 0.74
LDLRAD4-201ENST00000359446 ERICH6Q7L0X2 663 aa19.6■□□□□ 0.73
LDLRAD4-201ENST00000359446 RANGAP1P46060 587 aaPredicted RBP19.46■□□□□ 0.71
LDLRAD4-201ENST00000359446 CCER1Q8TC90 406 aaPredicted RBP19.46■□□□□ 0.71
LDLRAD4-201ENST00000359446 PCGF6Q9BYE7 350 aa19.44■□□□□ 0.7
LDLRAD4-201ENST00000359446 ATP1B4Q9UN42 357 aaPredicted RBP19.41■□□□□ 0.7
LDLRAD4-201ENST00000359446 CENPBP07199 599 aaPredicted RBP19.32■□□□□ 0.68
LDLRAD4-201ENST00000359446 NEFLP07196 543 aa19.11■□□□□ 0.65
LDLRAD4-201ENST00000359446 ZEB1P37275 1124 aaPredicted RBP19.09■□□□□ 0.65
LDLRAD4-201ENST00000359446 TRIM41Q8WV44 630 aa19.06■□□□□ 0.64
LDLRAD4-201ENST00000359446 UBTFP17480 764 aaKnown RBP19.05■□□□□ 0.64
LDLRAD4-201ENST00000359446 YTHDC1Q96MU7 727 aaKnown RBP18.97■□□□□ 0.63
LDLRAD4-201ENST00000359446 MYT1LQ9UL68 1186 aa18.81■□□□□ 0.6
LDLRAD4-201ENST00000359446 DAXXQ9UER7 740 aaPredicted RBP18.79■□□□□ 0.6
LDLRAD4-201ENST00000359446 POLR3GLQ9BT43 218 aa18.71■□□□□ 0.59
LDLRAD4-201ENST00000359446 MYT1Q01538 1121 aa18.71■□□□□ 0.59
LDLRAD4-201ENST00000359446 PPARGC1BQ86YN6 1023 aaKnown RBP18.7■□□□□ 0.58
LDLRAD4-201ENST00000359446 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.63■□□□□ 0.57
LDLRAD4-201ENST00000359446 HNRNPUL2Q1KMD3 747 aaKnown RBP18.63■□□□□ 0.57
LDLRAD4-201ENST00000359446 ITGAEP38570 1179 aa18.58■□□□□ 0.56
LDLRAD4-201ENST00000359446 CHIC1Q5VXU3 224 aa18.57■□□□□ 0.56
LDLRAD4-201ENST00000359446 CNGB1Q14028 1251 aaPredicted RBP18.53■□□□□ 0.56
LDLRAD4-201ENST00000359446 SLC4A1APQ9BWU0 796 aaKnown RBP18.51■□□□□ 0.55
LDLRAD4-201ENST00000359446 TRIM26Q12899 539 aaPredicted RBP18.38■□□□□ 0.53
LDLRAD4-201ENST00000359446 CLSPNQ9HAW4 1339 aa18.31■□□□□ 0.52
LDLRAD4-201ENST00000359446 ZNF316A6NFI3 1004 aaPredicted RBP18.31■□□□□ 0.52
LDLRAD4-201ENST00000359446 HRCP23327 699 aa18.19■□□□□ 0.5
LDLRAD4-201ENST00000359446 RTL5Q5HYW3 569 aaPredicted RBP18.18■□□□□ 0.5
LDLRAD4-201ENST00000359446 LOC105371045A0A1W2PR82 267 aa18.04■□□□□ 0.48
LDLRAD4-201ENST00000359446 FAM50AQ14320 339 aaKnown RBP18.03■□□□□ 0.48
LDLRAD4-201ENST00000359446 ZBTB47Q9UFB7 747 aaPredicted RBP17.98■□□□□ 0.47
LDLRAD4-201ENST00000359446 TRIM52Q96A61 297 aa17.98■□□□□ 0.47
LDLRAD4-201ENST00000359446 SLC24A1O60721 1099 aa17.98■□□□□ 0.47
LDLRAD4-201ENST00000359446 DIEXFQ68CQ4 756 aaKnown RBP17.93■□□□□ 0.46
LDLRAD4-201ENST00000359446 BCL11AQ9H165 835 aa17.9■□□□□ 0.46
LDLRAD4-201ENST00000359446 NEUROD1Q13562 356 aa17.9■□□□□ 0.46
LDLRAD4-201ENST00000359446 ZNF326Q5BKZ1 582 aaKnown RBP17.86■□□□□ 0.45
LDLRAD4-201ENST00000359446 BCANQ96GW7 911 aa17.8■□□□□ 0.44
LDLRAD4-201ENST00000359446 CANXP27824 592 aaKnown RBP17.8■□□□□ 0.44
LDLRAD4-201ENST00000359446 ANP32CO43423 234 aa17.75■□□□□ 0.43
LDLRAD4-201ENST00000359446 NEFMP07197 916 aa17.74■□□□□ 0.43
LDLRAD4-201ENST00000359446 CDK11AQ9UQ88 783 aaPredicted RBP17.73■□□□□ 0.43
LDLRAD4-201ENST00000359446 FBLN2P98095 1184 aa17.73■□□□□ 0.43
LDLRAD4-201ENST00000359446 PABPN1Q86U42 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
LDLRAD4-201ENST00000359446 GTF3C3Q9Y5Q9 886 aa17.53■□□□□ 0.4
LDLRAD4-201ENST00000359446 ANP32AP39687 249 aaKnown RBP17.5■□□□□ 0.39
LDLRAD4-201ENST00000359446 ARID3CA6NKF2 412 aa17.49■□□□□ 0.39
LDLRAD4-201ENST00000359446 ABCC9O60706 1549 aa17.48■□□□□ 0.39
LDLRAD4-201ENST00000359446 ESF1Q9H501 851 aaKnown RBP17.46■□□□□ 0.39
LDLRAD4-201ENST00000359446 HSP90AA1P07900 732 aaKnown RBP17.45■□□□□ 0.38
LDLRAD4-201ENST00000359446 NPM2Q86SE8 214 aaKnown RBP17.45■□□□□ 0.38
LDLRAD4-201ENST00000359446 ANP32BQ92688 251 aaKnown RBP17.44■□□□□ 0.38
LDLRAD4-201ENST00000359446 ZNF777Q9ULD5 760 aaPredicted RBP17.43■□□□□ 0.38
LDLRAD4-201ENST00000359446 PLPPR3Q6T4P5 718 aa17.42■□□□□ 0.38
LDLRAD4-201ENST00000359446 P3H3Q8IVL6 736 aa17.41■□□□□ 0.38
LDLRAD4-201ENST00000359446 STAG3Q9UJ98 1225 aa17.38■□□□□ 0.37
LDLRAD4-201ENST00000359446 CHGAP10645 457 aaKnown RBP17.32■□□□□ 0.36
LDLRAD4-201ENST00000359446 UPF2Q9HAU5 1272 aaKnown RBP17.31■□□□□ 0.36
LDLRAD4-201ENST00000359446 EIF5BO60841 1220 aaKnown RBP17.26■□□□□ 0.35
LDLRAD4-201ENST00000359446 SALL2Q9Y467 1007 aaPredicted RBP17.19■□□□□ 0.34
LDLRAD4-201ENST00000359446 TONSLQ96HA7 1378 aa17.19■□□□□ 0.34
LDLRAD4-201ENST00000359446 SCAF1Q9H7N4 1312 aaKnown RBP17.19■□□□□ 0.34
LDLRAD4-201ENST00000359446 FKBP8Q14318 412 aa17.15■□□□□ 0.34
LDLRAD4-201ENST00000359446 FAM9BQ8IZU0 186 aa17.15■□□□□ 0.34
LDLRAD4-201ENST00000359446 A0A0G2JS52 829 aa17.14■□□□□ 0.34
LDLRAD4-201ENST00000359446 HNRNPUQ00839 825 aaKnown RBP eCLIP17.14■□□□□ 0.333e-6■■■■□ 20.1
LDLRAD4-201ENST00000359446 NPM1P06748 294 aaKnown RBP eCLIP17.13■□□□□ 0.33
LDLRAD4-201ENST00000359446 ARXQ96QS3 562 aa17.11■□□□□ 0.33
LDLRAD4-201ENST00000359446 CDK11BP21127 795 aaKnown RBP17.1■□□□□ 0.33
LDLRAD4-201ENST00000359446 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.1■□□□□ 0.33
LDLRAD4-201ENST00000359446 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.1■□□□□ 0.336e-7■■■□□ 17.8
LDLRAD4-201ENST00000359446 ACIN1Q9UKV3 1341 aaKnown RBP17.09■□□□□ 0.33
LDLRAD4-201ENST00000359446 TMC1Q8TDI8 760 aa17.08■□□□□ 0.32
LDLRAD4-201ENST00000359446 WDR43Q15061 677 aaKnown RBP eCLIP17.06■□□□□ 0.32
LDLRAD4-201ENST00000359446 GLIPR1L2Q4G1C9 344 aa17.04■□□□□ 0.32
LDLRAD4-201ENST00000359446 CSRNP3Q8WYN3 585 aa17.03■□□□□ 0.32
LDLRAD4-201ENST00000359446 NBR1Q14596 966 aa17.03■□□□□ 0.32
LDLRAD4-201ENST00000359446 CCDC136Q96JN2 1154 aa17.03■□□□□ 0.32
LDLRAD4-201ENST00000359446 DDX10Q13206 875 aaKnown RBP17.02■□□□□ 0.32
LDLRAD4-201ENST00000359446 MYH16Q9H6N6 1097 aa17.02■□□□□ 0.31
LDLRAD4-201ENST00000359446 PLEKHG5O94827 1062 aa17■□□□□ 0.31
LDLRAD4-201ENST00000359446 SCRIBQ14160 1630 aa16.98■□□□□ 0.31
LDLRAD4-201ENST00000359446 ZBTB7CA1YPR0 619 aa16.98■□□□□ 0.31
LDLRAD4-201ENST00000359446 KDM2AQ9Y2K7 1162 aa16.97■□□□□ 0.31
LDLRAD4-201ENST00000359446 CHIC2Q9UKJ5 165 aa16.96■□□□□ 0.31
LDLRAD4-201ENST00000359446 C14orf37Q86TY3 774 aa16.95■□□□□ 0.3
LDLRAD4-201ENST00000359446 SENP3Q9H4L4 574 aaPredicted RBP16.93■□□□□ 0.3
LDLRAD4-201ENST00000359446 MRS2Q9HD23 443 aa16.87■□□□□ 0.29
LDLRAD4-201ENST00000359446 TSPY4P0CV99 314 aa16.87■□□□□ 0.29
LDLRAD4-201ENST00000359446 TSPY10P0CW01 314 aa16.87■□□□□ 0.29
LDLRAD4-201ENST00000359446 PPP1R15AO75807 674 aaPredicted RBP16.83■□□□□ 0.28
LDLRAD4-201ENST00000359446 NCLP19338 710 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms