RNA–Protein interactions for RNA: ENST00000308482.13

LRRFIP1-203, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRRFIP1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-203ENST00000308482 NISCHQ9Y2I1 1504 aa28.31■■■□□ 2.12
LRRFIP1-203ENST00000308482 SHROOM4Q9ULL8 1493 aa24.91■■□□□ 1.58
LRRFIP1-203ENST00000308482 SUPT5HO00267 1087 aaKnown RBP24.66■■□□□ 1.54
LRRFIP1-203ENST00000308482 HRCP23327 699 aa24.29■■□□□ 1.48
LRRFIP1-203ENST00000308482 MYO15BQ96JP2 1530 aa24.23■■□□□ 1.47
LRRFIP1-203ENST00000308482 CHIC1Q5VXU3 224 aa24.1■■□□□ 1.45
LRRFIP1-203ENST00000308482 PCGF6Q9BYE7 350 aa24.04■■□□□ 1.44
LRRFIP1-203ENST00000308482 ZCCHC6Q5VYS8 1495 aaKnown RBP24.03■■□□□ 1.44
LRRFIP1-203ENST00000308482 PPARGC1BQ86YN6 1023 aaKnown RBP23.92■■□□□ 1.42
LRRFIP1-203ENST00000308482 DCAF8L2P0C7V8 631 aa23.7■■□□□ 1.39
LRRFIP1-203ENST00000308482 CCDC180Q9P1Z9 1646 aa23.62■■□□□ 1.37
LRRFIP1-203ENST00000308482 LOC105371045A0A1W2PR82 267 aa23.57■■□□□ 1.36
LRRFIP1-203ENST00000308482 DCAF1Q9Y4B6 1507 aa23.5■■□□□ 1.35
LRRFIP1-203ENST00000308482 TRIM26Q12899 539 aaPredicted RBP23.28■■□□□ 1.32
LRRFIP1-203ENST00000308482 ZEB1P37275 1124 aaPredicted RBP22.89■■□□□ 1.25
LRRFIP1-203ENST00000308482 FAM9AQ8IZU1 332 aaPredicted RBP22.83■■□□□ 1.25
LRRFIP1-203ENST00000308482 SCAF1Q9H7N4 1312 aaKnown RBP22.83■■□□□ 1.24
LRRFIP1-203ENST00000308482 TRIM41Q8WV44 630 aa22.79■■□□□ 1.24
LRRFIP1-203ENST00000308482 ABCC9O60706 1549 aa22.78■■□□□ 1.24
LRRFIP1-203ENST00000308482 EHMT2Q96KQ7 1210 aa22.78■■□□□ 1.24
LRRFIP1-203ENST00000308482 PELP1Q8IZL8 1130 aaKnown RBP22.73■■□□□ 1.23
LRRFIP1-203ENST00000308482 RSF1Q96T23 1441 aaPredicted RBP22.7■■□□□ 1.22
LRRFIP1-203ENST00000308482 RB1CC1Q8TDY2 1594 aa22.59■■□□□ 1.21
LRRFIP1-203ENST00000308482 SCRIBQ14160 1630 aa22.55■■□□□ 1.2
LRRFIP1-203ENST00000308482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.42■■□□□ 1.18
LRRFIP1-203ENST00000308482 NEUROD1Q13562 356 aa22.34■■□□□ 1.17
LRRFIP1-203ENST00000308482 ACIN1Q9UKV3 1341 aaKnown RBP22.33■■□□□ 1.16
LRRFIP1-203ENST00000308482 CCER1Q8TC90 406 aaPredicted RBP22.31■■□□□ 1.16
LRRFIP1-203ENST00000308482 CECR2Q9BXF3 1484 aa22.22■■□□□ 1.15
LRRFIP1-203ENST00000308482 DIEXFQ68CQ4 756 aaKnown RBP22.16■■□□□ 1.14
LRRFIP1-203ENST00000308482 GTF3C3Q9Y5Q9 886 aa22.16■■□□□ 1.14
LRRFIP1-203ENST00000308482 TTBK1Q5TCY1 1321 aaPredicted RBP22.15■■□□□ 1.14
LRRFIP1-203ENST00000308482 MROH2BQ7Z745 1585 aa22.14■■□□□ 1.14
LRRFIP1-203ENST00000308482 WIZO95785 1651 aa22.07■■□□□ 1.12
LRRFIP1-203ENST00000308482 CENPBP07199 599 aaPredicted RBP22.04■■□□□ 1.12
LRRFIP1-203ENST00000308482 EIF4G1Q04637 1599 aaKnown RBP21.88■■□□□ 1.09
LRRFIP1-203ENST00000308482 ABCC8Q09428 1581 aa21.84■■□□□ 1.09
LRRFIP1-203ENST00000308482 YTHDC1Q96MU7 727 aaKnown RBP21.83■■□□□ 1.09
LRRFIP1-203ENST00000308482 WRNQ14191 1432 aaPredicted RBP eCLIP21.83■■□□□ 1.09
LRRFIP1-203ENST00000308482 CEP162Q5TB80 1403 aa21.83■■□□□ 1.09
LRRFIP1-203ENST00000308482 CCDC88BA6NC98 1476 aa21.83■■□□□ 1.09
LRRFIP1-203ENST00000308482 BAZ1AQ9NRL2 1556 aaPredicted RBP21.83■■□□□ 1.08
LRRFIP1-203ENST00000308482 ZNF316A6NFI3 1004 aaPredicted RBP21.8■■□□□ 1.08
LRRFIP1-203ENST00000308482 NACADO15069 1562 aa21.77■■□□□ 1.08
LRRFIP1-203ENST00000308482 SOGA1O94964 1423 aa21.75■■□□□ 1.07
LRRFIP1-203ENST00000308482 TNIKQ9UKE5 1360 aa21.68■■□□□ 1.06
LRRFIP1-203ENST00000308482 UBTFP17480 764 aaKnown RBP21.67■■□□□ 1.06
LRRFIP1-203ENST00000308482 MYT1Q01538 1121 aa21.67■■□□□ 1.06
LRRFIP1-203ENST00000308482 MIER1Q8N108 512 aa21.67■■□□□ 1.06
LRRFIP1-203ENST00000308482 RUSC2Q8N2Y8 1516 aa21.65■■□□□ 1.06
LRRFIP1-203ENST00000308482 CSRNP3Q8WYN3 585 aa21.6■■□□□ 1.05
LRRFIP1-203ENST00000308482 HNRNPUL2Q1KMD3 747 aaKnown RBP21.6■■□□□ 1.05
LRRFIP1-203ENST00000308482 TOP2AP11388 1531 aaKnown RBP21.58■■□□□ 1.04
LRRFIP1-203ENST00000308482 SMARCA2P51531 1590 aa21.54■■□□□ 1.04
LRRFIP1-203ENST00000308482 EEA1Q15075 1411 aa21.45■■□□□ 1.02
LRRFIP1-203ENST00000308482 GOLGA3Q08378 1498 aa21.45■■□□□ 1.02
LRRFIP1-203ENST00000308482 SMARCA4P51532 1647 aa21.44■■□□□ 1.02
LRRFIP1-203ENST00000308482 RANGAP1P46060 587 aaPredicted RBP21.31■■□□□ 1
LRRFIP1-203ENST00000308482 CLIP1P30622 1438 aa21.3■■□□□ 1
LRRFIP1-203ENST00000308482 CEP164Q9UPV0 1460 aa21.25■□□□□ 0.99
LRRFIP1-203ENST00000308482 VPS8Q8N3P4 1428 aa21.23■□□□□ 0.99
LRRFIP1-203ENST00000308482 APLP2Q06481 763 aa21.23■□□□□ 0.99
LRRFIP1-203ENST00000308482 SYNJ1O43426 1573 aa21.19■□□□□ 0.98
LRRFIP1-203ENST00000308482 KIF21BO75037 1637 aa21.18■□□□□ 0.98
LRRFIP1-203ENST00000308482 SUPT16HQ9Y5B9 1047 aaKnown RBP21.17■□□□□ 0.98
LRRFIP1-203ENST00000308482 RAPGEF2Q9Y4G8 1499 aa21.15■□□□□ 0.98
LRRFIP1-203ENST00000308482 UNC13AQ9UPW8 1703 aa21.14■□□□□ 0.97
LRRFIP1-203ENST00000308482 DHX57Q6P158 1386 aaKnown RBP21.1■□□□□ 0.97
LRRFIP1-203ENST00000308482 PABPN1Q86U42 306 aaKnown RBP eCLIP21.08■□□□□ 0.97
LRRFIP1-203ENST00000308482 BAZ1BQ9UIG0 1483 aaKnown RBP21.04■□□□□ 0.96
LRRFIP1-203ENST00000308482 CLSPNQ9HAW4 1339 aa21■□□□□ 0.95
LRRFIP1-203ENST00000308482 KANK4Q5T7N3 995 aaPredicted RBP20.99■□□□□ 0.95
LRRFIP1-203ENST00000308482 TSHZ2Q9NRE2 1034 aa20.99■□□□□ 0.95
LRRFIP1-203ENST00000308482 KCNH8Q96L42 1107 aa20.95■□□□□ 0.94
LRRFIP1-203ENST00000308482 ARAP1Q96P48 1450 aa20.88■□□□□ 0.93
LRRFIP1-203ENST00000308482 PEG3Q9GZU2 1588 aa20.88■□□□□ 0.93
LRRFIP1-203ENST00000308482 ITGAEP38570 1179 aa20.86■□□□□ 0.93
LRRFIP1-203ENST00000308482 BICRAQ9NZM4 1560 aa20.85■□□□□ 0.93
LRRFIP1-203ENST00000308482 BCANQ96GW7 911 aa20.84■□□□□ 0.93
LRRFIP1-203ENST00000308482 ANP32EQ9BTT0 268 aa20.81■□□□□ 0.92
LRRFIP1-203ENST00000308482 ATAD2BQ9ULI0 1458 aa20.8■□□□□ 0.92
LRRFIP1-203ENST00000308482 RRBP1Q9P2E9 1410 aaKnown RBP20.79■□□□□ 0.92
LRRFIP1-203ENST00000308482 TOP2BQ02880 1626 aa20.78■□□□□ 0.92
LRRFIP1-203ENST00000308482 PRXQ9BXM0 1461 aa20.76■□□□□ 0.91
LRRFIP1-203ENST00000308482 CCNB3Q8WWL7 1395 aa20.74■□□□□ 0.91
LRRFIP1-203ENST00000308482 ERICH3Q5RHP9 1530 aa20.72■□□□□ 0.91
LRRFIP1-203ENST00000308482 CUX2O14529 1486 aa20.71■□□□□ 0.91
LRRFIP1-203ENST00000308482 FKBP8Q14318 412 aa20.71■□□□□ 0.91
LRRFIP1-203ENST00000308482 DDX10Q13206 875 aaKnown RBP20.68■□□□□ 0.9
LRRFIP1-203ENST00000308482 RAB3GAP2Q9H2M9 1393 aa20.68■□□□□ 0.9
LRRFIP1-203ENST00000308482 MAPKBP1O60336 1514 aa20.66■□□□□ 0.9
LRRFIP1-203ENST00000308482 BIVM-ERCC5R4GMW8 1640 aa20.65■□□□□ 0.9
LRRFIP1-203ENST00000308482 ARHGAP35Q9NRY4 1499 aa20.62■□□□□ 0.89
LRRFIP1-203ENST00000308482 SIN3AQ96ST3 1273 aa20.62■□□□□ 0.89
LRRFIP1-203ENST00000308482 HIRIP3Q9BW71 556 aaPredicted RBP20.6■□□□□ 0.89
LRRFIP1-203ENST00000308482 WDR97A6NE52 1622 aa20.58■□□□□ 0.89
LRRFIP1-203ENST00000308482 TRIM52Q96A61 297 aa20.55■□□□□ 0.88
LRRFIP1-203ENST00000308482 CUX1P39880 1505 aa20.54■□□□□ 0.88
LRRFIP1-203ENST00000308482 KIF27Q86VH2 1401 aa20.54■□□□□ 0.88
LRRFIP1-203ENST00000308482 BCL11AQ9H165 835 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms