RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 NISCHQ9Y2I1 1504 aa30.17■■■□□ 2.42
ABCD3-201ENST00000315713 ABCC9O60706 1549 aa27.33■■□□□ 1.97
ABCD3-201ENST00000315713 CCDC180Q9P1Z9 1646 aa27.29■■□□□ 1.96
ABCD3-201ENST00000315713 RB1CC1Q8TDY2 1594 aa25.97■■□□□ 1.75
ABCD3-201ENST00000315713 NACADO15069 1562 aa25.73■■□□□ 1.71
ABCD3-201ENST00000315713 DNAJC5BQ9UF47 199 aa25.68■■□□□ 1.7
ABCD3-201ENST00000315713 UNC13AQ9UPW8 1703 aa25.61■■□□□ 1.69
ABCD3-201ENST00000315713 DCAF8L2P0C7V8 631 aa25.37■■□□□ 1.65
ABCD3-201ENST00000315713 PABPN1Q86U42 306 aaKnown RBP eCLIP25.31■■□□□ 1.64
ABCD3-201ENST00000315713 MYO15BQ96JP2 1530 aa25.27■■□□□ 1.64
ABCD3-201ENST00000315713 BICRAQ9NZM4 1560 aa25.26■■□□□ 1.63
ABCD3-201ENST00000315713 ZCCHC6Q5VYS8 1495 aaKnown RBP25.01■■□□□ 1.59
ABCD3-201ENST00000315713 DCAF1Q9Y4B6 1507 aa24.9■■□□□ 1.58
ABCD3-201ENST00000315713 SCRIBQ14160 1630 aa24.84■■□□□ 1.57
ABCD3-201ENST00000315713 SHROOM4Q9ULL8 1493 aa24.83■■□□□ 1.56
ABCD3-201ENST00000315713 CC2D2AQ9P2K1 1620 aa24.75■■□□□ 1.55
ABCD3-201ENST00000315713 EIF4G1Q04637 1599 aaKnown RBP24.63■■□□□ 1.53
ABCD3-201ENST00000315713 CECR2Q9BXF3 1484 aa24.61■■□□□ 1.53
ABCD3-201ENST00000315713 NCAPD3P42695 1498 aa23.67■■□□□ 1.38
ABCD3-201ENST00000315713 SMARCA4P51532 1647 aa23.66■■□□□ 1.38
ABCD3-201ENST00000315713 DNAJC5Q9H3Z4 198 aa23.65■■□□□ 1.38
ABCD3-201ENST00000315713 ATAD2BQ9ULI0 1458 aa23.62■■□□□ 1.37
ABCD3-201ENST00000315713 CUX2O14529 1486 aa23.61■■□□□ 1.37
ABCD3-201ENST00000315713 ERCC6Q03468 1493 aa23.6■■□□□ 1.37
ABCD3-201ENST00000315713 HMGXB3Q12766 1538 aa23.59■■□□□ 1.37
ABCD3-201ENST00000315713 SMARCA2P51531 1590 aa23.58■■□□□ 1.37
ABCD3-201ENST00000315713 NESP48681 1621 aa23.45■■□□□ 1.34
ABCD3-201ENST00000315713 BAZ1AQ9NRL2 1556 aaPredicted RBP23.44■■□□□ 1.34
ABCD3-201ENST00000315713 BAZ1BQ9UIG0 1483 aaKnown RBP23.41■■□□□ 1.34
ABCD3-201ENST00000315713 PEG3Q9GZU2 1588 aa23.39■■□□□ 1.33
ABCD3-201ENST00000315713 THOC2Q8NI27 1593 aaKnown RBP23.35■■□□□ 1.33
ABCD3-201ENST00000315713 KIF21AQ7Z4S6 1674 aa23.29■■□□□ 1.32
ABCD3-201ENST00000315713 MROH2BQ7Z745 1585 aa23.27■■□□□ 1.32
ABCD3-201ENST00000315713 LAMC3Q9Y6N6 1575 aa23.27■■□□□ 1.32
ABCD3-201ENST00000315713 WIZO95785 1651 aa23.06■■□□□ 1.28
ABCD3-201ENST00000315713 PDS5BQ9NTI5 1447 aa23.02■■□□□ 1.28
ABCD3-201ENST00000315713 CADPSQ9ULU8 1353 aa22.92■■□□□ 1.26
ABCD3-201ENST00000315713 WDR62O43379 1518 aa22.92■■□□□ 1.26
ABCD3-201ENST00000315713 MRC2Q9UBG0 1479 aa22.92■■□□□ 1.26
ABCD3-201ENST00000315713 CEP164Q9UPV0 1460 aa22.8■■□□□ 1.24
ABCD3-201ENST00000315713 FANCD2Q9BXW9 1451 aa22.74■■□□□ 1.23
ABCD3-201ENST00000315713 PRDM2Q13029 1718 aa22.73■■□□□ 1.23
ABCD3-201ENST00000315713 TOP2AP11388 1531 aaKnown RBP22.71■■□□□ 1.23
ABCD3-201ENST00000315713 CFTRP13569 1480 aa22.67■■□□□ 1.22
ABCD3-201ENST00000315713 RSF1Q96T23 1441 aaPredicted RBP22.65■■□□□ 1.22
ABCD3-201ENST00000315713 TRIM41Q8WV44 630 aa22.6■■□□□ 1.21
ABCD3-201ENST00000315713 URB2Q14146 1524 aaKnown RBP22.6■■□□□ 1.21
ABCD3-201ENST00000315713 CCDC88BA6NC98 1476 aa22.38■■□□□ 1.17
ABCD3-201ENST00000315713 OSCARQ8IYS5 282 aa22.34■■□□□ 1.17
ABCD3-201ENST00000315713 ZNF608Q9ULD9 1512 aaPredicted RBP22.34■■□□□ 1.17
ABCD3-201ENST00000315713 RIMBP3CA6NJZ7 1639 aa22.33■■□□□ 1.17
ABCD3-201ENST00000315713 RIMBP3BA6NNM3 1639 aa22.33■■□□□ 1.17
ABCD3-201ENST00000315713 RIMBP3Q9UFD9 1639 aa22.33■■□□□ 1.17
ABCD3-201ENST00000315713 TOPBP1Q92547 1522 aa22.32■■□□□ 1.16
ABCD3-201ENST00000315713 EIF4G3O43432 1585 aaKnown RBP22.31■■□□□ 1.16
ABCD3-201ENST00000315713 IFT140Q96RY7 1462 aa22.31■■□□□ 1.16
ABCD3-201ENST00000315713 DNMBPQ6XZF7 1577 aa22.25■■□□□ 1.15
ABCD3-201ENST00000315713 CHD1O14646 1710 aa22.25■■□□□ 1.15
ABCD3-201ENST00000315713 TARBP1Q13395 1621 aaKnown RBP22.19■■□□□ 1.14
ABCD3-201ENST00000315713 ARHGEF11O15085 1522 aa22.18■■□□□ 1.14
ABCD3-201ENST00000315713 ABCC8Q09428 1581 aa22.17■■□□□ 1.14
ABCD3-201ENST00000315713 POLA1P09884 1462 aaPredicted RBP22.07■■□□□ 1.12
ABCD3-201ENST00000315713 AQRO60306 1485 aaKnown RBP eCLIP22.06■■□□□ 1.121e-8■■■■■ 43.7
ABCD3-201ENST00000315713 RAD54L2Q9Y4B4 1467 aa21.98■■□□□ 1.11
ABCD3-201ENST00000315713 ARAP1Q96P48 1450 aa21.96■■□□□ 1.11
ABCD3-201ENST00000315713 WDR97A6NE52 1622 aa21.93■■□□□ 1.1
ABCD3-201ENST00000315713 FGD5Q6ZNL6 1462 aa21.91■■□□□ 1.1
ABCD3-201ENST00000315713 CUX1P39880 1505 aa21.9■■□□□ 1.1
ABCD3-201ENST00000315713 SNAPC4Q5SXM2 1469 aa21.9■■□□□ 1.1
ABCD3-201ENST00000315713 FBLN2P98095 1184 aa21.88■■□□□ 1.09
ABCD3-201ENST00000315713 PBRM1Q86U86 1689 aa21.88■■□□□ 1.09
ABCD3-201ENST00000315713 SOGA1O94964 1423 aa21.88■■□□□ 1.09
ABCD3-201ENST00000315713 CYB5RLQ6IPT4 315 aa21.87■■□□□ 1.09
ABCD3-201ENST00000315713 TDRD9Q8NDG6 1382 aaKnown RBP21.87■■□□□ 1.09
ABCD3-201ENST00000315713 CLASP1Q7Z460 1538 aa21.86■■□□□ 1.09
ABCD3-201ENST00000315713 SYNJ1O43426 1573 aa21.82■■□□□ 1.08
ABCD3-201ENST00000315713 MAGI1Q96QZ7 1491 aaPredicted RBP21.8■■□□□ 1.08
ABCD3-201ENST00000315713 AEBP2Q6ZN18 517 aaPredicted RBP21.76■■□□□ 1.07
ABCD3-201ENST00000315713 GRIN2BQ13224 1484 aa21.76■■□□□ 1.07
ABCD3-201ENST00000315713 SUPT5HO00267 1087 aaKnown RBP21.75■■□□□ 1.07
ABCD3-201ENST00000315713 ABCA5Q8WWZ7 1642 aa21.73■■□□□ 1.07
ABCD3-201ENST00000315713 SYNJ2O15056 1496 aa21.72■■□□□ 1.07
ABCD3-201ENST00000315713 TRHP20396 242 aaPredicted RBP21.68■■□□□ 1.06
ABCD3-201ENST00000315713 GAPVD1Q14C86 1478 aa21.66■■□□□ 1.06
ABCD3-201ENST00000315713 CHMP7Q8WUX9 453 aaPredicted RBP21.66■■□□□ 1.06
ABCD3-201ENST00000315713 ABCA10Q8WWZ4 1543 aa21.64■■□□□ 1.05
ABCD3-201ENST00000315713 ADAMTS12P58397 1594 aa21.58■■□□□ 1.05
ABCD3-201ENST00000315713 BIVM-ERCC5R4GMW8 1640 aa21.57■■□□□ 1.04
ABCD3-201ENST00000315713 ERCC6L2Q5T890 1561 aa21.53■■□□□ 1.04
ABCD3-201ENST00000315713 GRIN2AQ12879 1464 aa21.52■■□□□ 1.03
ABCD3-201ENST00000315713 CEP170Q5SW79 1584 aa21.51■■□□□ 1.03
ABCD3-201ENST00000315713 TOP2BQ02880 1626 aa21.51■■□□□ 1.03
ABCD3-201ENST00000315713 SHROOM2Q13796 1616 aa21.46■■□□□ 1.03
ABCD3-201ENST00000315713 WRNQ14191 1432 aaPredicted RBP eCLIP21.45■■□□□ 1.02
ABCD3-201ENST00000315713 NUP160Q12769 1436 aa21.42■■□□□ 1.02
ABCD3-201ENST00000315713 ERICH3Q5RHP9 1530 aa21.37■■□□□ 1.01
ABCD3-201ENST00000315713 FHAD1B1AJZ9 1412 aa21.36■■□□□ 1.01
ABCD3-201ENST00000315713 KIF13AQ9H1H9 1805 aa21.36■■□□□ 1.01
ABCD3-201ENST00000315713 RUSC2Q8N2Y8 1516 aa21.29■■□□□ 1
ABCD3-201ENST00000315713 PRG4Q92954 1404 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms