RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 NISCHQ9Y2I1 1504 aa29.48■■■□□ 2.31
NEDD4L-223ENST00000588516 ABCC9O60706 1549 aa27.59■■■□□ 2.01
NEDD4L-223ENST00000588516 CCDC180Q9P1Z9 1646 aa26.7■■□□□ 1.86
NEDD4L-223ENST00000588516 DNAJC5BQ9UF47 199 aa26.56■■□□□ 1.84
NEDD4L-223ENST00000588516 RB1CC1Q8TDY2 1594 aa25.86■■□□□ 1.73
NEDD4L-223ENST00000588516 PABPN1Q86U42 306 aaKnown RBP eCLIP25.63■■□□□ 1.69
NEDD4L-223ENST00000588516 NACADO15069 1562 aa25.49■■□□□ 1.67
NEDD4L-223ENST00000588516 DCAF8L2P0C7V8 631 aa25.45■■□□□ 1.66
NEDD4L-223ENST00000588516 UNC13AQ9UPW8 1703 aa25.19■■□□□ 1.62
NEDD4L-223ENST00000588516 BICRAQ9NZM4 1560 aa25.08■■□□□ 1.61
NEDD4L-223ENST00000588516 DNAJC5Q9H3Z4 198 aa24.95■■□□□ 1.58
NEDD4L-223ENST00000588516 CECR2Q9BXF3 1484 aa24.92■■□□□ 1.58
NEDD4L-223ENST00000588516 MYO15BQ96JP2 1530 aa24.83■■□□□ 1.57
NEDD4L-223ENST00000588516 CC2D2AQ9P2K1 1620 aa24.82■■□□□ 1.56
NEDD4L-223ENST00000588516 AEBP2Q6ZN18 517 aaPredicted RBP24.77■■□□□ 1.56
NEDD4L-223ENST00000588516 ZCCHC6Q5VYS8 1495 aaKnown RBP24.7■■□□□ 1.54
NEDD4L-223ENST00000588516 SHROOM4Q9ULL8 1493 aa24.65■■□□□ 1.54
NEDD4L-223ENST00000588516 EIF4G1Q04637 1599 aaKnown RBP24.57■■□□□ 1.52
NEDD4L-223ENST00000588516 SCRIBQ14160 1630 aa24.39■■□□□ 1.49
NEDD4L-223ENST00000588516 DCAF1Q9Y4B6 1507 aa24.26■■□□□ 1.47
NEDD4L-223ENST00000588516 CUX2O14529 1486 aa24.03■■□□□ 1.44
NEDD4L-223ENST00000588516 SUPT5HO00267 1087 aaKnown RBP23.94■■□□□ 1.42
NEDD4L-223ENST00000588516 ERCC6Q03468 1493 aa23.91■■□□□ 1.42
NEDD4L-223ENST00000588516 TRIM41Q8WV44 630 aa23.65■■□□□ 1.38
NEDD4L-223ENST00000588516 NCAPD3P42695 1498 aa23.56■■□□□ 1.36
NEDD4L-223ENST00000588516 NESP48681 1621 aa23.46■■□□□ 1.35
NEDD4L-223ENST00000588516 CHIC1Q5VXU3 224 aa23.4■■□□□ 1.34
NEDD4L-223ENST00000588516 ATAD2BQ9ULI0 1458 aa23.4■■□□□ 1.34
NEDD4L-223ENST00000588516 THOC2Q8NI27 1593 aaKnown RBP23.29■■□□□ 1.32
NEDD4L-223ENST00000588516 SMARCA2P51531 1590 aa23.27■■□□□ 1.32
NEDD4L-223ENST00000588516 HMGXB3Q12766 1538 aa23.27■■□□□ 1.32
NEDD4L-223ENST00000588516 BAZ1BQ9UIG0 1483 aaKnown RBP23.15■■□□□ 1.3
NEDD4L-223ENST00000588516 SMARCA4P51532 1647 aa23.13■■□□□ 1.29
NEDD4L-223ENST00000588516 LAMC3Q9Y6N6 1575 aa23.12■■□□□ 1.29
NEDD4L-223ENST00000588516 PDS5BQ9NTI5 1447 aa23.09■■□□□ 1.29
NEDD4L-223ENST00000588516 KIF21AQ7Z4S6 1674 aa23.07■■□□□ 1.28
NEDD4L-223ENST00000588516 RSF1Q96T23 1441 aaPredicted RBP22.97■■□□□ 1.27
NEDD4L-223ENST00000588516 BAZ1AQ9NRL2 1556 aaPredicted RBP22.93■■□□□ 1.26
NEDD4L-223ENST00000588516 OSCARQ8IYS5 282 aa22.91■■□□□ 1.26
NEDD4L-223ENST00000588516 MRC2Q9UBG0 1479 aa22.9■■□□□ 1.26
NEDD4L-223ENST00000588516 PEG3Q9GZU2 1588 aa22.87■■□□□ 1.25
NEDD4L-223ENST00000588516 CADPSQ9ULU8 1353 aa22.85■■□□□ 1.25
NEDD4L-223ENST00000588516 WDR62O43379 1518 aa22.82■■□□□ 1.24
NEDD4L-223ENST00000588516 MROH2BQ7Z745 1585 aa22.71■■□□□ 1.23
NEDD4L-223ENST00000588516 CEP164Q9UPV0 1460 aa22.67■■□□□ 1.22
NEDD4L-223ENST00000588516 HRCP23327 699 aa22.61■■□□□ 1.21
NEDD4L-223ENST00000588516 RIMBP3CA6NJZ7 1639 aa22.59■■□□□ 1.21
NEDD4L-223ENST00000588516 RIMBP3BA6NNM3 1639 aa22.59■■□□□ 1.21
NEDD4L-223ENST00000588516 RIMBP3Q9UFD9 1639 aa22.59■■□□□ 1.21
NEDD4L-223ENST00000588516 FANCD2Q9BXW9 1451 aa22.58■■□□□ 1.21
NEDD4L-223ENST00000588516 TRHP20396 242 aaPredicted RBP22.51■■□□□ 1.19
NEDD4L-223ENST00000588516 CYB5RLQ6IPT4 315 aa22.47■■□□□ 1.19
NEDD4L-223ENST00000588516 ARHGEF11O15085 1522 aa22.46■■□□□ 1.19
NEDD4L-223ENST00000588516 PCGF6Q9BYE7 350 aa22.46■■□□□ 1.19
NEDD4L-223ENST00000588516 LOC105371045A0A1W2PR82 267 aa22.45■■□□□ 1.18
NEDD4L-223ENST00000588516 URB2Q14146 1524 aaKnown RBP22.41■■□□□ 1.18
NEDD4L-223ENST00000588516 WIZO95785 1651 aa22.41■■□□□ 1.18
NEDD4L-223ENST00000588516 CFTRP13569 1480 aa22.38■■□□□ 1.17
NEDD4L-223ENST00000588516 TRIM26Q12899 539 aaPredicted RBP22.38■■□□□ 1.17
NEDD4L-223ENST00000588516 TOP2AP11388 1531 aaKnown RBP22.29■■□□□ 1.16
NEDD4L-223ENST00000588516 ZNF608Q9ULD9 1512 aaPredicted RBP22.29■■□□□ 1.16
NEDD4L-223ENST00000588516 IFT140Q96RY7 1462 aa22.24■■□□□ 1.15
NEDD4L-223ENST00000588516 ARAP1Q96P48 1450 aa22.18■■□□□ 1.14
NEDD4L-223ENST00000588516 ZEB1P37275 1124 aaPredicted RBP22.15■■□□□ 1.14
NEDD4L-223ENST00000588516 FBLN2P98095 1184 aa22.15■■□□□ 1.14
NEDD4L-223ENST00000588516 EIF4G3O43432 1585 aaKnown RBP22.08■■□□□ 1.12
NEDD4L-223ENST00000588516 TOPBP1Q92547 1522 aa22.06■■□□□ 1.12
NEDD4L-223ENST00000588516 CHD1O14646 1710 aa22.05■■□□□ 1.12
NEDD4L-223ENST00000588516 FAM9AQ8IZU1 332 aaPredicted RBP22.03■■□□□ 1.12
NEDD4L-223ENST00000588516 CCDC88BA6NC98 1476 aa22.03■■□□□ 1.12
NEDD4L-223ENST00000588516 AQRO60306 1485 aaKnown RBP eCLIP22.03■■□□□ 1.12
NEDD4L-223ENST00000588516 PRDM2Q13029 1718 aa22.01■■□□□ 1.11
NEDD4L-223ENST00000588516 EEA1Q15075 1411 aa21.98■■□□□ 1.11
NEDD4L-223ENST00000588516 ABCC8Q09428 1581 aa21.96■■□□□ 1.11
NEDD4L-223ENST00000588516 DNMBPQ6XZF7 1577 aa21.88■■□□□ 1.09
NEDD4L-223ENST00000588516 TARBP1Q13395 1621 aaKnown RBP21.85■■□□□ 1.09
NEDD4L-223ENST00000588516 CHMP7Q8WUX9 453 aaPredicted RBP21.81■■□□□ 1.08
NEDD4L-223ENST00000588516 TDRD9Q8NDG6 1382 aaKnown RBP21.8■■□□□ 1.08
NEDD4L-223ENST00000588516 POLA1P09884 1462 aaPredicted RBP21.78■■□□□ 1.08
NEDD4L-223ENST00000588516 CLASP1Q7Z460 1538 aa21.77■■□□□ 1.08
NEDD4L-223ENST00000588516 RAD54L2Q9Y4B4 1467 aa21.76■■□□□ 1.07
NEDD4L-223ENST00000588516 SNAPC4Q5SXM2 1469 aa21.75■■□□□ 1.07
NEDD4L-223ENST00000588516 SYNJ1O43426 1573 aa21.74■■□□□ 1.07
NEDD4L-223ENST00000588516 WRNQ14191 1432 aaPredicted RBP eCLIP21.74■■□□□ 1.07
NEDD4L-223ENST00000588516 SOGA1O94964 1423 aa21.72■■□□□ 1.07
NEDD4L-223ENST00000588516 TNIKQ9UKE5 1360 aa21.72■■□□□ 1.07
NEDD4L-223ENST00000588516 PPARGC1BQ86YN6 1023 aaKnown RBP21.7■■□□□ 1.06
NEDD4L-223ENST00000588516 GAPVD1Q14C86 1478 aa21.68■■□□□ 1.06
NEDD4L-223ENST00000588516 CSRNP3Q8WYN3 585 aa21.66■■□□□ 1.06
NEDD4L-223ENST00000588516 MAGI1Q96QZ7 1491 aaPredicted RBP21.63■■□□□ 1.05
NEDD4L-223ENST00000588516 GOLGA3Q08378 1498 aa21.61■■□□□ 1.05
NEDD4L-223ENST00000588516 SYNJ2O15056 1496 aa21.58■■□□□ 1.05
NEDD4L-223ENST00000588516 GRIN2BQ13224 1484 aa21.58■■□□□ 1.05
NEDD4L-223ENST00000588516 CEP162Q5TB80 1403 aa21.58■■□□□ 1.05
NEDD4L-223ENST00000588516 EHMT2Q96KQ7 1210 aa21.58■■□□□ 1.05
NEDD4L-223ENST00000588516 WDR97A6NE52 1622 aa21.56■■□□□ 1.04
NEDD4L-223ENST00000588516 FGD5Q6ZNL6 1462 aa21.54■■□□□ 1.04
NEDD4L-223ENST00000588516 KIF21BO75037 1637 aa21.53■■□□□ 1.04
NEDD4L-223ENST00000588516 ILDR1Q86SU0 546 aaPredicted RBP21.48■■□□□ 1.03
NEDD4L-223ENST00000588516 UBTFP17480 764 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms