Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 LINC01578-205ENST00000555227 1078 ntTSL 52.72□□□□□ -1.971e-6■■□□□ 12.6
SUB1P53999 UBXN7-202ENST00000381887 375 ntTSL 32.64□□□□□ -1.991e-6■■□□□ 12.6
SUB1P53999 LINC01578-202ENST00000554133 1776 ntTSL 22.49□□□□□ -2.011e-6■■□□□ 12.6
SUB1P53999 XRCC6-207ENST00000464116 359 ntTSL 26.22□□□□□ -1.413e-9■■□□□ 12.5
SUB1P53999 ATP5O-208ENST00000491703 2839 ntTSL 211.17□□□□□ -0.624e-7■■□□□ 12.5
SUB1P53999 ATP5O-205ENST00000431254 583 ntTSL 26.99□□□□□ -1.294e-7■■□□□ 12.5
SUB1P53999 ATP5O-201ENST00000290299 932 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.324e-7■■□□□ 12.5
SUB1P53999 AP000311.1-201ENST00000429238 1078 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.364e-7■■□□□ 12.5
SUB1P53999 IMPDH2-210ENST00000485500 852 ntTSL 38.08□□□□□ -1.121e-7■■□□□ 12.5
SUB1P53999 IMPDH2-203ENST00000442157 865 ntTSL 27.33□□□□□ -1.241e-7■■□□□ 12.5
SUB1P53999 RPS25-204ENST00000527853 1462 ntTSL 213.48□□□□□ -0.252e-26■■□□□ 12.5
SUB1P53999 RPS25-201ENST00000524864 1078 ntTSL 210.33□□□□□ -0.762e-26■■□□□ 12.5
SUB1P53999 RPS25-203ENST00000527791 711 ntTSL 29.84□□□□□ -0.832e-26■■□□□ 12.5
SUB1P53999 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.882e-26■■□□□ 12.5
SUB1P53999 RPS25-206ENST00000532567 508 ntTSL 23.75□□□□□ -1.812e-26■■□□□ 12.5
SUB1P53999 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.287e-7■■□□□ 12.5
SUB1P53999 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.247e-7■■□□□ 12.5
SUB1P53999 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.317e-7■■□□□ 12.5
SUB1P53999 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.327e-7■■□□□ 12.5
SUB1P53999 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.427e-7■■□□□ 12.5
SUB1P53999 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.55□□□□□ -0.242e-7■■□□□ 12.5
SUB1P53999 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.282e-7■■□□□ 12.5
SUB1P53999 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.075e-7■■□□□ 12.5
SUB1P53999 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.595e-7■■□□□ 12.5
SUB1P53999 ARPC4-TTLL3-203ENST00000424442 903 ntTSL 57.8□□□□□ -1.165e-7■■□□□ 12.5
SUB1P53999 ARPC4-TTLL3-202ENST00000418163 551 ntTSL 47.27□□□□□ -1.255e-7■■□□□ 12.5
SUB1P53999 ARPC4-TTLL3-204ENST00000453882 499 ntTSL 44.43□□□□□ -1.75e-7■■□□□ 12.5
SUB1P53999 HIST1H1C-201ENST00000343677 642 ntAPPRIS P1 BASIC9.65□□□□□ -0.861e-14■■□□□ 12.5
SUB1P53999 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.363e-6■■□□□ 12.5
SUB1P53999 CNOT1-211ENST00000567188 7830 ntTSL 1 (best)5.29□□□□□ -1.563e-6■■□□□ 12.5
SUB1P53999 CNOT1-204ENST00000563130 2280 ntTSL 24.7□□□□□ -1.663e-6■■□□□ 12.5
SUB1P53999 FASN-204ENST00000580382 681 ntTSL 313.17□□□□□ -0.32e-9■■□□□ 12.5
SUB1P53999 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.243e-8■■□□□ 12.5
SUB1P53999 VTI1B-201ENST00000216456 1103 ntTSL 1 (best)16.21■□□□□ 0.193e-8■■□□□ 12.5
SUB1P53999 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.393e-8■■□□□ 12.5
SUB1P53999 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.3□□□□□ -0.443e-8■■□□□ 12.5
SUB1P53999 DNAJC7-211ENST00000588814 1719 ntTSL 210.56□□□□□ -0.723e-8■■□□□ 12.5
SUB1P53999 BACH1-204ENST00000435072 692 ntTSL 310.01□□□□□ -0.813e-8■■□□□ 12.5
SUB1P53999 BACH1-205ENST00000447177 751 ntTSL 29.94□□□□□ -0.823e-8■■□□□ 12.5
SUB1P53999 UBE2T-203ENST00000487227 885 ntTSL 39.45□□□□□ -0.93e-8■■□□□ 12.5
SUB1P53999 DNAJC7-209ENST00000587727 449 ntTSL 39.2□□□□□ -0.943e-8■■□□□ 12.5
SUB1P53999 BACH1-206ENST00000451655 777 ntTSL 36.57□□□□□ -1.363e-8■■□□□ 12.5
SUB1P53999 VTI1B-206ENST00000556461 576 ntTSL 26.04□□□□□ -1.443e-8■■□□□ 12.5
SUB1P53999 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.63e-8■■□□□ 12.5
SUB1P53999 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.683e-8■■□□□ 12.5
SUB1P53999 VTI1B-203ENST00000554636 565 ntTSL 33.03□□□□□ -1.923e-8■■□□□ 12.5
SUB1P53999 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.026e-7■■□□□ 12.5
SUB1P53999 MYL6-208ENST00000547703 675 ntTSL 59.32□□□□□ -0.924e-7■■□□□ 12.4
SUB1P53999 FBL-206ENST00000597224 732 ntTSL 36.51□□□□□ -1.373e-30■■□□□ 12.4
SUB1P53999 PLRG1-204ENST00000503751 873 ntTSL 27.37□□□□□ -1.237e-9■■□□□ 12.4
SUB1P53999 PLRG1-206ENST00000506192 855 ntTSL 25.97□□□□□ -1.457e-9■■□□□ 12.4
SUB1P53999 PLRG1-213ENST00000515520 576 ntTSL 25.18□□□□□ -1.587e-9■■□□□ 12.4
SUB1P53999 PLRG1-210ENST00000509975 572 ntTSL 44.93□□□□□ -1.627e-9■■□□□ 12.4
SUB1P53999 PLRG1-211ENST00000512719 749 ntTSL 23.04□□□□□ -1.927e-9■■□□□ 12.4
SUB1P53999 EIF3L-201ENST00000381683 1599 ntTSL 2 BASIC9.03□□□□□ -0.962e-8■■□□□ 12.4
SUB1P53999 EIF3L-211ENST00000476955 583 ntTSL 56.58□□□□□ -1.362e-8■■□□□ 12.4
SUB1P53999 EIF3L-212ENST00000477256 1708 ntTSL 55.99□□□□□ -1.452e-8■■□□□ 12.4
SUB1P53999 EIF3L-204ENST00000414316 581 ntTSL 54.9□□□□□ -1.632e-8■■□□□ 12.4
SUB1P53999 EIF3L-206ENST00000439997 787 ntTSL 54.57□□□□□ -1.682e-8■■□□□ 12.4
SUB1P53999 EIF3L-205ENST00000436452 574 ntTSL 43.64□□□□□ -1.832e-8■■□□□ 12.4
SUB1P53999 EIF3L-208ENST00000451427 583 ntTSL 43.62□□□□□ -1.832e-8■■□□□ 12.4
SUB1P53999 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.146e-6■■□□□ 12.4
SUB1P53999 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.43■□□□□ 0.76e-6■■□□□ 12.4
SUB1P53999 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.086e-6■■□□□ 12.4
SUB1P53999 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.076e-6■■□□□ 12.4
SUB1P53999 TXNRD2-209ENST00000474308 1854 ntTSL 214.71□□□□□ -0.056e-6■■□□□ 12.4
SUB1P53999 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.32□□□□□ -0.126e-6■■□□□ 12.4
SUB1P53999 NDUFA4-205ENST00000486007 434 ntTSL 23.74□□□□□ -1.814e-8■■□□□ 12.4
SUB1P53999 NDUFA4-202ENST00000463308 288 ntTSL 21□□□□□ -2.254e-8■■□□□ 12.4
SUB1P53999 BUB3-204ENST00000407911 895 ntTSL 1 (best)9.81□□□□□ -0.841e-6■■□□□ 12.4
SUB1P53999 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.253e-8■■□□□ 12.4
SUB1P53999 SRSF2-201ENST00000358156 572 ntTSL 414.17□□□□□ -0.143e-8■■□□□ 12.4
SUB1P53999 CHMP1A-207ENST00000549328 1003 ntTSL 313.91□□□□□ -0.183e-8■■□□□ 12.4
SUB1P53999 CHMP1A-204ENST00000547687 2007 ntTSL 1 (best)13.22□□□□□ -0.293e-8■■□□□ 12.4
SUB1P53999 SRSF2-207ENST00000583836 561 ntTSL 513.14□□□□□ -0.313e-8■■□□□ 12.4
SUB1P53999 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.04□□□□□ -0.323e-8■■□□□ 12.4
SUB1P53999 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.02□□□□□ -0.333e-8■■□□□ 12.4
SUB1P53999 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC12.99□□□□□ -0.333e-8■■□□□ 12.4
SUB1P53999 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.373e-8■■□□□ 12.4
SUB1P53999 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.387e-7■■□□□ 12.4
SUB1P53999 DLGAP5-204ENST00000554067 641 ntTSL 212.51□□□□□ -0.413e-8■■□□□ 12.4
SUB1P53999 CHMP1A-206ENST00000549139 812 ntTSL 211.95□□□□□ -0.53e-8■■□□□ 12.4
SUB1P53999 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.513e-8■■□□□ 12.4
SUB1P53999 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.67e-7■■□□□ 12.4
SUB1P53999 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.743e-8■■□□□ 12.4
SUB1P53999 VAMP7-201ENST00000262640 2496 ntTSL 1 (best) BASIC10.36□□□□□ -0.753e-8■■□□□ 12.4
SUB1P53999 NUDT21-201ENST00000300291 4436 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.073e-8■■□□□ 12.4
SUB1P53999 SMYD3-201ENST00000366516 1863 ntTSL 1 (best)7.43□□□□□ -1.223e-8■■□□□ 12.4
SUB1P53999 SMYD3-212ENST00000483072 466 ntTSL 26.51□□□□□ -1.373e-8■■□□□ 12.4
SUB1P53999 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.43e-8■■□□□ 12.4
SUB1P53999 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC6.09□□□□□ -1.443e-8■■□□□ 12.4
SUB1P53999 SMYD3-209ENST00000470510 1042 ntTSL 55.9□□□□□ -1.463e-8■■□□□ 12.4
SUB1P53999 SMYD3-202ENST00000366517 1372 ntTSL 1 (best)5.43□□□□□ -1.543e-8■■□□□ 12.4
SUB1P53999 SMYD3-211ENST00000482592 514 ntTSL 33.01□□□□□ -1.933e-8■■□□□ 12.4
SUB1P53999 SMYD3-215ENST00000490322 368 ntTSL 32.23□□□□□ -2.053e-8■■□□□ 12.4
SUB1P53999 SEC11A-204ENST00000558196 540 ntTSL 35.64□□□□□ -1.511e-6■■□□□ 12.4
SUB1P53999 FLNA-216ENST00000490936 5374 ntTSL 1 (best)14.47□□□□□ -0.097e-7■■□□□ 12.4
SUB1P53999 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.37■□□□□ 0.216e-8■■□□□ 12.4
SUB1P53999 H2AFX-201ENST00000375167 1373 ntTSL 212.44□□□□□ -0.426e-8■■□□□ 12.4
SUB1P53999 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.243e-6■■□□□ 12.3
Retrieved 100 of 11,644 protein–RNA pairs in 541.1 ms