RNA–Protein interactions for RNA: ENST00000554133.5

LINC01578-202, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 2

Gene LINC01578, Length 1,776 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-202ENST00000554133 AEBP2Q6ZN18 517 aaPredicted RBP20.33■□□□□ 0.84
LINC01578-202ENST00000554133 CHIC1Q5VXU3 224 aa19.06■□□□□ 0.64
LINC01578-202ENST00000554133 POTEDQ86YR6 584 aa17.92■□□□□ 0.46
LINC01578-202ENST00000554133 SENP3Q9H4L4 574 aaPredicted RBP17.49■□□□□ 0.39
LINC01578-202ENST00000554133 PHF23Q9BUL5 403 aaPredicted RBP17.17■□□□□ 0.34
LINC01578-202ENST00000554133 FOXD1Q16676 465 aa16.35■□□□□ 0.21
LINC01578-202ENST00000554133 MSH5O43196 834 aa15.57■□□□□ 0.08
LINC01578-202ENST00000554133 PIAS4Q8N2W9 510 aaPredicted RBP15.13■□□□□ 0.01
LINC01578-202ENST00000554133 PPP6R1Q9UPN7 881 aa14.8□□□□□ -0.04
LINC01578-202ENST00000554133 ADRA2BP18089 450 aa14.74□□□□□ -0.05
LINC01578-202ENST00000554133 PLPPR3Q6T4P5 718 aa14.73□□□□□ -0.05
LINC01578-202ENST00000554133 CACNB1Q02641 598 aaPredicted RBP14.04□□□□□ -0.16
LINC01578-202ENST00000554133 DMRT2Q9Y5R5 561 aa13.76□□□□□ -0.21
LINC01578-202ENST00000554133 MAPK8IP2Q13387 824 aaPredicted RBP13.72□□□□□ -0.21
LINC01578-202ENST00000554133 POTEHQ6S545 545 aa13.68□□□□□ -0.22
LINC01578-202ENST00000554133 SCAF1Q9H7N4 1312 aaKnown RBP13.55□□□□□ -0.24
LINC01578-202ENST00000554133 DCAF8L1A6NGE4 600 aa13.26□□□□□ -0.29
LINC01578-202ENST00000554133 RNF39Q9H2S5 420 aa13.2□□□□□ -0.3
LINC01578-202ENST00000554133 HOXD11P31277 338 aaPredicted RBP13.02□□□□□ -0.32
LINC01578-202ENST00000554133 C1QBPQ07021 282 aaKnown RBP12.99□□□□□ -0.33
LINC01578-202ENST00000554133 PPP4R3CPQ6ZMV5 832 aa12.84□□□□□ -0.35
LINC01578-202ENST00000554133 RNF216Q9NWF9 866 aaPredicted RBP12.77□□□□□ -0.36
LINC01578-202ENST00000554133 CNKSR2Q8WXI2 1034 aa12.74□□□□□ -0.37
LINC01578-202ENST00000554133 DNAJC5BQ9UF47 199 aa12.71□□□□□ -0.38
LINC01578-202ENST00000554133 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.45□□□□□ -0.42
LINC01578-202ENST00000554133 NCBP3Q53F19 620 aaKnown RBP12.21□□□□□ -0.45
LINC01578-202ENST00000554133 DSG3P32926 999 aa12.15□□□□□ -0.46
LINC01578-202ENST00000554133 CAPN15O75808 1086 aa12.12□□□□□ -0.47
LINC01578-202ENST00000554133 PLSCR2Q9NRY7 297 aa12.07□□□□□ -0.48
LINC01578-202ENST00000554133 U3KPZ7 1027 aaPredicted RBP12.07□□□□□ -0.48
LINC01578-202ENST00000554133 SPINK5Q9NQ38 1064 aaPredicted RBP12.06□□□□□ -0.48
LINC01578-202ENST00000554133 NPM3O75607 178 aaKnown RBP11.96□□□□□ -0.49
LINC01578-202ENST00000554133 SP7Q8TDD2 431 aaPredicted RBP11.91□□□□□ -0.5
LINC01578-202ENST00000554133 TRHP20396 242 aaPredicted RBP11.77□□□□□ -0.52
LINC01578-202ENST00000554133 ABCB7O75027 752 aa11.77□□□□□ -0.53
LINC01578-202ENST00000554133 APLP2Q06481 763 aa11.76□□□□□ -0.53
LINC01578-202ENST00000554133 ZNF219Q9P2Y4 722 aaPredicted RBP11.72□□□□□ -0.53
LINC01578-202ENST00000554133 RBM42Q9BTD8 480 aaKnown RBP11.66□□□□□ -0.54
LINC01578-202ENST00000554133 CHRDL2Q6WN34 429 aa11.61□□□□□ -0.55
LINC01578-202ENST00000554133 SLC4A2P04920 1241 aa11.57□□□□□ -0.56
LINC01578-202ENST00000554133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.56□□□□□ -0.56
LINC01578-202ENST00000554133 HNRNPUL2Q1KMD3 747 aaKnown RBP11.56□□□□□ -0.56
LINC01578-202ENST00000554133 SAMD1Q6SPF0 538 aaPredicted RBP11.46□□□□□ -0.57
LINC01578-202ENST00000554133 POLA2Q14181 598 aa11.31□□□□□ -0.6
LINC01578-202ENST00000554133 AKT1S1Q96B36 256 aa11.26□□□□□ -0.61
LINC01578-202ENST00000554133 PIP4P2Q8N4L2 257 aa11.21□□□□□ -0.62
LINC01578-202ENST00000554133 HAX1O00165 279 aa11.19□□□□□ -0.62
LINC01578-202ENST00000554133 KCNA4P22459 653 aa11.18□□□□□ -0.62
LINC01578-202ENST00000554133 LHX8Q68G74 356 aa11.13□□□□□ -0.63
LINC01578-202ENST00000554133 REM2Q8IYK8 340 aaPredicted RBP11.13□□□□□ -0.63
LINC01578-202ENST00000554133 MYCNP04198 464 aaPredicted RBP11.11□□□□□ -0.63
LINC01578-202ENST00000554133 ZBTB12Q9Y330 459 aaPredicted RBP11.07□□□□□ -0.64
LINC01578-202ENST00000554133 FXR2P51116 673 aaKnown RBP eCLIP11.04□□□□□ -0.64
LINC01578-202ENST00000554133 PITPNM1O00562 1244 aa11□□□□□ -0.65
LINC01578-202ENST00000554133 EVX2Q03828 476 aa10.95□□□□□ -0.66
LINC01578-202ENST00000554133 OSCARQ8IYS5 282 aa10.95□□□□□ -0.66
LINC01578-202ENST00000554133 ATF5Q9Y2D1 282 aaPredicted RBP10.85□□□□□ -0.67
LINC01578-202ENST00000554133 PCDH10Q9P2E7 1040 aa10.76□□□□□ -0.69
LINC01578-202ENST00000554133 PRKAR2AP13861 404 aaKnown RBP10.74□□□□□ -0.69
LINC01578-202ENST00000554133 C19orf67A6NJJ6 358 aa10.72□□□□□ -0.69
LINC01578-202ENST00000554133 GABBR2O75899 941 aa10.72□□□□□ -0.69
LINC01578-202ENST00000554133 SPDYE2BA6NHP3 402 aa10.66□□□□□ -0.7
LINC01578-202ENST00000554133 SPDYE6P0CI01 402 aa10.66□□□□□ -0.7
LINC01578-202ENST00000554133 SPDYE2Q495Y8 402 aa10.66□□□□□ -0.7
LINC01578-202ENST00000554133 FOXD4L1Q9NU39 408 aa10.66□□□□□ -0.7
LINC01578-202ENST00000554133 SPDYE1Q8NFV5 336 aaPredicted RBP10.64□□□□□ -0.71
LINC01578-202ENST00000554133 CLEC11AQ9Y240 323 aa10.64□□□□□ -0.71
LINC01578-202ENST00000554133 POTEMA6NI47 508 aa10.56□□□□□ -0.72
LINC01578-202ENST00000554133 FBLN2P98095 1184 aa10.55□□□□□ -0.72
LINC01578-202ENST00000554133 SLC4A1APQ9BWU0 796 aaKnown RBP10.48□□□□□ -0.73
LINC01578-202ENST00000554133 CHADLQ6NUI6 762 aa10.47□□□□□ -0.73
LINC01578-202ENST00000554133 POTEIP0CG38 1075 aa10.45□□□□□ -0.74
LINC01578-202ENST00000554133 POTEGQ6S5H5 508 aa10.45□□□□□ -0.74
LINC01578-202ENST00000554133 ZNF692Q9BU19 519 aaPredicted RBP10.44□□□□□ -0.74
LINC01578-202ENST00000554133 SSUH2Q9Y2M2 353 aa10.42□□□□□ -0.74
LINC01578-202ENST00000554133 ATXN8OSP0DMR3 200 aa10.41□□□□□ -0.74
LINC01578-202ENST00000554133 PRR29P0C7W0 189 aa10.39□□□□□ -0.75
LINC01578-202ENST00000554133 CLCN6P51797 869 aa10.37□□□□□ -0.75
LINC01578-202ENST00000554133 CD44P16070 742 aaKnown RBP10.36□□□□□ -0.75
LINC01578-202ENST00000554133 MKRN4PQ13434 485 aaPredicted RBP10.32□□□□□ -0.76
LINC01578-202ENST00000554133 DCBLD2Q96PD2 775 aa10.32□□□□□ -0.76
LINC01578-202ENST00000554133 FARP1Q9Y4F1 1045 aaPredicted RBP10.27□□□□□ -0.77
LINC01578-202ENST00000554133 PABPN1Q86U42 306 aaKnown RBP eCLIP10.25□□□□□ -0.77
LINC01578-202ENST00000554133 ZBTB22O15209 634 aa10.24□□□□□ -0.77
LINC01578-202ENST00000554133 OTUD5Q96G74 571 aa10.18□□□□□ -0.78
LINC01578-202ENST00000554133 ZNF579Q8NAF0 562 aaKnown RBP10.17□□□□□ -0.78
LINC01578-202ENST00000554133 ZRANB1Q9UGI0 708 aa10.14□□□□□ -0.79
LINC01578-202ENST00000554133 POTEB2H3BUK9 544 aa10.08□□□□□ -0.8
LINC01578-202ENST00000554133 GALR2O43603 387 aaPredicted RBP10.06□□□□□ -0.8
LINC01578-202ENST00000554133 CREBZFQ9NS37 354 aa9.96□□□□□ -0.82
LINC01578-202ENST00000554133 PAK3O75914 559 aaPredicted RBP9.95□□□□□ -0.82
LINC01578-202ENST00000554133 PELP1Q8IZL8 1130 aaKnown RBP9.93□□□□□ -0.82
LINC01578-202ENST00000554133 PHF12Q96QT6 1004 aa9.92□□□□□ -0.82
LINC01578-202ENST00000554133 MAMSTRQ6ZN01 415 aa9.91□□□□□ -0.82
LINC01578-202ENST00000554133 STAG3Q9UJ98 1225 aa9.89□□□□□ -0.83
LINC01578-202ENST00000554133 FAM163AQ96GL9 167 aaPredicted RBP9.87□□□□□ -0.83
LINC01578-202ENST00000554133 METRNQ9UJH8 293 aa9.87□□□□□ -0.83
LINC01578-202ENST00000554133 SLC39A7Q92504 469 aa9.86□□□□□ -0.83
LINC01578-202ENST00000554133 C7P10643 843 aa9.86□□□□□ -0.83
LINC01578-202ENST00000554133 POTEJP0CG39 1038 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms