RNA–Protein interactions for RNA: ENST00000464116.2

XRCC6-207, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2

Gene XRCC6, Length 359 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-207ENST00000464116 CHIC1Q5VXU3 224 aa26.3■■□□□ 1.8
XRCC6-207ENST00000464116 AEBP2Q6ZN18 517 aaPredicted RBP25.93■■□□□ 1.74
XRCC6-207ENST00000464116 PHF23Q9BUL5 403 aaPredicted RBP23.27■■□□□ 1.32
XRCC6-207ENST00000464116 SENP3Q9H4L4 574 aaPredicted RBP22.03■■□□□ 1.12
XRCC6-207ENST00000464116 PLPPR3Q6T4P5 718 aa21.97■■□□□ 1.11
XRCC6-207ENST00000464116 EHMT2Q96KQ7 1210 aa20.8■□□□□ 0.92
XRCC6-207ENST00000464116 KCNA4P22459 653 aa20.58■□□□□ 0.89
XRCC6-207ENST00000464116 ADRA2BP18089 450 aa20.48■□□□□ 0.87
XRCC6-207ENST00000464116 FOXD1Q16676 465 aa20.26■□□□□ 0.83
XRCC6-207ENST00000464116 PPP6R1Q9UPN7 881 aa20.07■□□□□ 0.8
XRCC6-207ENST00000464116 CSRNP3Q8WYN3 585 aa19.98■□□□□ 0.79
XRCC6-207ENST00000464116 SLC4A1APQ9BWU0 796 aaKnown RBP19.85■□□□□ 0.77
XRCC6-207ENST00000464116 PPP4R3CPQ6ZMV5 832 aa19.52■□□□□ 0.72
XRCC6-207ENST00000464116 NCBP3Q53F19 620 aaKnown RBP19.42■□□□□ 0.7
XRCC6-207ENST00000464116 PIAS4Q8N2W9 510 aaPredicted RBP19.35■□□□□ 0.69
XRCC6-207ENST00000464116 SLC24A1O60721 1099 aa19.16■□□□□ 0.66
XRCC6-207ENST00000464116 NPM3O75607 178 aaKnown RBP19.12■□□□□ 0.65
XRCC6-207ENST00000464116 ZBTB22O15209 634 aa18.95■□□□□ 0.62
XRCC6-207ENST00000464116 AMER1Q5JTC6 1135 aaPredicted RBP18.79■□□□□ 0.6
XRCC6-207ENST00000464116 RTN4Q9NQC3 1192 aaKnown RBP18.74■□□□□ 0.59
XRCC6-207ENST00000464116 CNKSR2Q8WXI2 1034 aa18.69■□□□□ 0.58
XRCC6-207ENST00000464116 FOXD4L1Q9NU39 408 aa18.57■□□□□ 0.56
XRCC6-207ENST00000464116 SCAF1Q9H7N4 1312 aaKnown RBP18.56■□□□□ 0.56
XRCC6-207ENST00000464116 MSH5O43196 834 aa18.51■□□□□ 0.55
XRCC6-207ENST00000464116 DNAJC5BQ9UF47 199 aa18.44■□□□□ 0.54
XRCC6-207ENST00000464116 NISCHQ9Y2I1 1504 aa18.08■□□□□ 0.48
XRCC6-207ENST00000464116 RNF216Q9NWF9 866 aaPredicted RBP17.99■□□□□ 0.47
XRCC6-207ENST00000464116 MAPK8IP2Q13387 824 aaPredicted RBP17.98■□□□□ 0.47
XRCC6-207ENST00000464116 FKBP8Q14318 412 aa17.96■□□□□ 0.47
XRCC6-207ENST00000464116 POTEDQ86YR6 584 aa17.95■□□□□ 0.46
XRCC6-207ENST00000464116 ATXN8OSP0DMR3 200 aa17.85■□□□□ 0.45
XRCC6-207ENST00000464116 SLC4A2P04920 1241 aa17.71■□□□□ 0.43
XRCC6-207ENST00000464116 DMRT2Q9Y5R5 561 aa17.66■□□□□ 0.42
XRCC6-207ENST00000464116 MYCNP04198 464 aaPredicted RBP17.65■□□□□ 0.42
XRCC6-207ENST00000464116 HOXD11P31277 338 aaPredicted RBP17.59■□□□□ 0.41
XRCC6-207ENST00000464116 PLCB2Q00722 1185 aa17.25■□□□□ 0.35
XRCC6-207ENST00000464116 ATF5Q9Y2D1 282 aaPredicted RBP17.04■□□□□ 0.32
XRCC6-207ENST00000464116 BCANQ96GW7 911 aa17.01■□□□□ 0.31
XRCC6-207ENST00000464116 FBXO3Q9UK99 471 aa17■□□□□ 0.31
XRCC6-207ENST00000464116 HAP1P54257 671 aaPredicted RBP16.99■□□□□ 0.31
XRCC6-207ENST00000464116 DCAF8L1A6NGE4 600 aa16.91■□□□□ 0.3
XRCC6-207ENST00000464116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.88■□□□□ 0.29
XRCC6-207ENST00000464116 HNRNPUL2Q1KMD3 747 aaKnown RBP16.88■□□□□ 0.29
XRCC6-207ENST00000464116 SAMD1Q6SPF0 538 aaPredicted RBP16.87■□□□□ 0.29
XRCC6-207ENST00000464116 PRKCSHP14314 528 aaPredicted RBP16.85■□□□□ 0.29
XRCC6-207ENST00000464116 TAOK2Q9UL54 1235 aa16.83■□□□□ 0.28
XRCC6-207ENST00000464116 VSIG10Q8N0Z9 540 aa16.82■□□□□ 0.28
XRCC6-207ENST00000464116 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.82■□□□□ 0.281e-8■■□□□ 14.5
XRCC6-207ENST00000464116 DCAF8L2P0C7V8 631 aa16.72■□□□□ 0.27
XRCC6-207ENST00000464116 VASPP50552 380 aaPredicted RBP16.7■□□□□ 0.26
XRCC6-207ENST00000464116 SPDYE4A6NLX3 237 aa16.67■□□□□ 0.26
XRCC6-207ENST00000464116 PROM2Q8N271 834 aa16.63■□□□□ 0.25
XRCC6-207ENST00000464116 ZNF219Q9P2Y4 722 aaPredicted RBP16.62■□□□□ 0.25
XRCC6-207ENST00000464116 U3KPZ7 1027 aaPredicted RBP16.59■□□□□ 0.25
XRCC6-207ENST00000464116 IFNLR1Q8IU57 520 aaPredicted RBP16.57■□□□□ 0.24
XRCC6-207ENST00000464116 PKD2Q13563 968 aa16.55■□□□□ 0.24
XRCC6-207ENST00000464116 TPRNQ4KMQ1 711 aa16.53■□□□□ 0.24
XRCC6-207ENST00000464116 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.46■□□□□ 0.23
XRCC6-207ENST00000464116 BBXQ8WY36 941 aaPredicted RBP16.44■□□□□ 0.22
XRCC6-207ENST00000464116 KDM2AQ9Y2K7 1162 aa16.44■□□□□ 0.22
XRCC6-207ENST00000464116 APLP2Q06481 763 aa16.43■□□□□ 0.22
XRCC6-207ENST00000464116 MKRN4PQ13434 485 aaPredicted RBP16.38■□□□□ 0.21
XRCC6-207ENST00000464116 FBLN2P98095 1184 aa16.33■□□□□ 0.2
XRCC6-207ENST00000464116 PAXIP1Q6ZW49 1069 aaPredicted RBP16.31■□□□□ 0.2
XRCC6-207ENST00000464116 CFAP44Q96MT7 982 aa16.25■□□□□ 0.19
XRCC6-207ENST00000464116 CCDC180Q9P1Z9 1646 aa16.23■□□□□ 0.19
XRCC6-207ENST00000464116 NPM1P06748 294 aaKnown RBP eCLIP16.22■□□□□ 0.19
XRCC6-207ENST00000464116 ECM2O94769 699 aaPredicted RBP16.2■□□□□ 0.18
XRCC6-207ENST00000464116 SPOCK2Q92563 424 aa16.17■□□□□ 0.18
XRCC6-207ENST00000464116 SPRYD3Q8NCJ5 442 aa16.14■□□□□ 0.17
XRCC6-207ENST00000464116 KLHL34Q8N239 644 aa16.09■□□□□ 0.17
XRCC6-207ENST00000464116 TSHZ2Q9NRE2 1034 aa16.07■□□□□ 0.16
XRCC6-207ENST00000464116 ABCC9O60706 1549 aa16.07■□□□□ 0.16
XRCC6-207ENST00000464116 RGL2O15211 777 aa15.99■□□□□ 0.15
XRCC6-207ENST00000464116 NBR1Q14596 966 aa15.96■□□□□ 0.15
XRCC6-207ENST00000464116 TIMELESSQ9UNS1 1208 aa15.96■□□□□ 0.15
XRCC6-207ENST00000464116 DNAJC5Q9H3Z4 198 aa15.93■□□□□ 0.14
XRCC6-207ENST00000464116 TRHP20396 242 aaPredicted RBP15.92■□□□□ 0.14
XRCC6-207ENST00000464116 TULP1O00294 542 aaPredicted RBP15.9■□□□□ 0.14
XRCC6-207ENST00000464116 POLA2Q14181 598 aa15.9■□□□□ 0.14
XRCC6-207ENST00000464116 RNF39Q9H2S5 420 aa15.87■□□□□ 0.13
XRCC6-207ENST00000464116 STAG3Q9UJ98 1225 aa15.87■□□□□ 0.13
XRCC6-207ENST00000464116 ERICH6Q7L0X2 663 aa15.86■□□□□ 0.13
XRCC6-207ENST00000464116 SPINK5Q9NQ38 1064 aaPredicted RBP15.85■□□□□ 0.13
XRCC6-207ENST00000464116 GTF3C3Q9Y5Q9 886 aa15.85■□□□□ 0.13
XRCC6-207ENST00000464116 CAPN15O75808 1086 aa15.84■□□□□ 0.13
XRCC6-207ENST00000464116 CHGAP10645 457 aaKnown RBP15.83■□□□□ 0.12
XRCC6-207ENST00000464116 ARXQ96QS3 562 aa15.82■□□□□ 0.12
XRCC6-207ENST00000464116 PLCD3Q8N3E9 789 aa15.79■□□□□ 0.12
XRCC6-207ENST00000464116 C1QBPQ07021 282 aaKnown RBP15.78■□□□□ 0.12
XRCC6-207ENST00000464116 ZBTB12Q9Y330 459 aaPredicted RBP15.78■□□□□ 0.12
XRCC6-207ENST00000464116 DAXXQ9UER7 740 aaPredicted RBP15.75■□□□□ 0.11
XRCC6-207ENST00000464116 HS6ST3Q8IZP7 471 aa15.66■□□□□ 0.1
XRCC6-207ENST00000464116 MIER1Q8N108 512 aa15.66■□□□□ 0.1
XRCC6-207ENST00000464116 CIZ1Q9ULV3 898 aaPredicted RBP15.65■□□□□ 0.1
XRCC6-207ENST00000464116 TRIM41Q8WV44 630 aa15.64■□□□□ 0.09
XRCC6-207ENST00000464116 TMEM132AQ24JP5 1023 aa15.61■□□□□ 0.09
XRCC6-207ENST00000464116 ZNF692Q9BU19 519 aaPredicted RBP15.59■□□□□ 0.09
XRCC6-207ENST00000464116 ZBTB47Q9UFB7 747 aaPredicted RBP15.56■□□□□ 0.08
XRCC6-207ENST00000464116 ABCB7O75027 752 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms