RNA–Protein interactions for RNA: ENST00000555227.1

LINC01578-205, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 5

Gene LINC01578, Length 1,078 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-205ENST00000555227 AEBP2Q6ZN18 517 aaPredicted RBP32.31■■■□□ 2.76
LINC01578-205ENST00000555227 CHIC1Q5VXU3 224 aa30.37■■■□□ 2.45
LINC01578-205ENST00000555227 SENP3Q9H4L4 574 aaPredicted RBP27.76■■■□□ 2.03
LINC01578-205ENST00000555227 PHF23Q9BUL5 403 aaPredicted RBP27.24■■□□□ 1.95
LINC01578-205ENST00000555227 FOXD1Q16676 465 aa25.82■■□□□ 1.72
LINC01578-205ENST00000555227 POTEDQ86YR6 584 aa24.44■■□□□ 1.5
LINC01578-205ENST00000555227 MSH5O43196 834 aa24.43■■□□□ 1.5
LINC01578-205ENST00000555227 PLPPR3Q6T4P5 718 aa24.12■■□□□ 1.45
LINC01578-205ENST00000555227 PIAS4Q8N2W9 510 aaPredicted RBP24.06■■□□□ 1.44
LINC01578-205ENST00000555227 PPP6R1Q9UPN7 881 aa23.76■■□□□ 1.39
LINC01578-205ENST00000555227 ADRA2BP18089 450 aa23.68■■□□□ 1.38
LINC01578-205ENST00000555227 DMRT2Q9Y5R5 561 aa21.93■■□□□ 1.1
LINC01578-205ENST00000555227 MAPK8IP2Q13387 824 aaPredicted RBP21.83■■□□□ 1.09
LINC01578-205ENST00000555227 SCAF1Q9H7N4 1312 aaKnown RBP21.81■■□□□ 1.08
LINC01578-205ENST00000555227 CACNB1Q02641 598 aaPredicted RBP21.14■□□□□ 0.97
LINC01578-205ENST00000555227 PPP4R3CPQ6ZMV5 832 aa21.03■□□□□ 0.96
LINC01578-205ENST00000555227 DCAF8L1A6NGE4 600 aa20.97■□□□□ 0.95
LINC01578-205ENST00000555227 HOXD11P31277 338 aaPredicted RBP20.96■□□□□ 0.95
LINC01578-205ENST00000555227 CNKSR2Q8WXI2 1034 aa20.78■□□□□ 0.92
LINC01578-205ENST00000555227 RNF39Q9H2S5 420 aa20.76■□□□□ 0.91
LINC01578-205ENST00000555227 RNF216Q9NWF9 866 aaPredicted RBP20.7■□□□□ 0.9
LINC01578-205ENST00000555227 C1QBPQ07021 282 aaKnown RBP20.47■□□□□ 0.87
LINC01578-205ENST00000555227 DNAJC5BQ9UF47 199 aa20.42■□□□□ 0.86
LINC01578-205ENST00000555227 NCBP3Q53F19 620 aaKnown RBP20.18■□□□□ 0.82
LINC01578-205ENST00000555227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.94■□□□□ 0.78
LINC01578-205ENST00000555227 NPM3O75607 178 aaKnown RBP19.8■□□□□ 0.76
LINC01578-205ENST00000555227 U3KPZ7 1027 aaPredicted RBP19.47■□□□□ 0.71
LINC01578-205ENST00000555227 KCNA4P22459 653 aa19.46■□□□□ 0.71
LINC01578-205ENST00000555227 CAPN15O75808 1086 aa19.29■□□□□ 0.68
LINC01578-205ENST00000555227 DSG3P32926 999 aa19.28■□□□□ 0.68
LINC01578-205ENST00000555227 SPINK5Q9NQ38 1064 aaPredicted RBP19.26■□□□□ 0.67
LINC01578-205ENST00000555227 POTEHQ6S545 545 aa19.09■□□□□ 0.65
LINC01578-205ENST00000555227 APLP2Q06481 763 aa19.04■□□□□ 0.64
LINC01578-205ENST00000555227 SLC4A2P04920 1241 aa18.99■□□□□ 0.63
LINC01578-205ENST00000555227 ZNF219Q9P2Y4 722 aaPredicted RBP18.92■□□□□ 0.62
LINC01578-205ENST00000555227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.88■□□□□ 0.61
LINC01578-205ENST00000555227 HNRNPUL2Q1KMD3 747 aaKnown RBP18.88■□□□□ 0.61
LINC01578-205ENST00000555227 TRHP20396 242 aaPredicted RBP18.86■□□□□ 0.61
LINC01578-205ENST00000555227 ABCB7O75027 752 aa18.76■□□□□ 0.59
LINC01578-205ENST00000555227 SAMD1Q6SPF0 538 aaPredicted RBP18.73■□□□□ 0.59
LINC01578-205ENST00000555227 SLC4A1APQ9BWU0 796 aaKnown RBP18.52■□□□□ 0.56
LINC01578-205ENST00000555227 RBM42Q9BTD8 480 aaKnown RBP18.51■□□□□ 0.55
LINC01578-205ENST00000555227 MYCNP04198 464 aaPredicted RBP18.4■□□□□ 0.54
LINC01578-205ENST00000555227 POLA2Q14181 598 aa18.26■□□□□ 0.51
LINC01578-205ENST00000555227 CHRDL2Q6WN34 429 aa18.18■□□□□ 0.5
LINC01578-205ENST00000555227 FOXD4L1Q9NU39 408 aa18.17■□□□□ 0.5
LINC01578-205ENST00000555227 ZBTB12Q9Y330 459 aaPredicted RBP18.01■□□□□ 0.47
LINC01578-205ENST00000555227 AKT1S1Q96B36 256 aa17.96■□□□□ 0.47
LINC01578-205ENST00000555227 ATF5Q9Y2D1 282 aaPredicted RBP17.86■□□□□ 0.45
LINC01578-205ENST00000555227 ZBTB22O15209 634 aa17.82■□□□□ 0.44
LINC01578-205ENST00000555227 REM2Q8IYK8 340 aaPredicted RBP17.73■□□□□ 0.43
LINC01578-205ENST00000555227 SP7Q8TDD2 431 aaPredicted RBP17.73■□□□□ 0.43
LINC01578-205ENST00000555227 OSCARQ8IYS5 282 aa17.72■□□□□ 0.43
LINC01578-205ENST00000555227 PIP4P2Q8N4L2 257 aa17.65■□□□□ 0.42
LINC01578-205ENST00000555227 ATXN8OSP0DMR3 200 aa17.6■□□□□ 0.41
LINC01578-205ENST00000555227 PITPNM1O00562 1244 aa17.55■□□□□ 0.4
LINC01578-205ENST00000555227 FXR2P51116 673 aaKnown RBP eCLIP17.5■□□□□ 0.39
LINC01578-205ENST00000555227 HAX1O00165 279 aa17.42■□□□□ 0.38
LINC01578-205ENST00000555227 SPDYE2BA6NHP3 402 aa17.37■□□□□ 0.37
LINC01578-205ENST00000555227 SPDYE6P0CI01 402 aa17.37■□□□□ 0.37
LINC01578-205ENST00000555227 SPDYE2Q495Y8 402 aa17.37■□□□□ 0.37
LINC01578-205ENST00000555227 FBLN2P98095 1184 aa17.34■□□□□ 0.37
LINC01578-205ENST00000555227 EHMT2Q96KQ7 1210 aa17.31■□□□□ 0.36
LINC01578-205ENST00000555227 CSRNP3Q8WYN3 585 aa17.29■□□□□ 0.36
LINC01578-205ENST00000555227 SPDYE1Q8NFV5 336 aaPredicted RBP17.16■□□□□ 0.34
LINC01578-205ENST00000555227 EVX2Q03828 476 aa17.1■□□□□ 0.33
LINC01578-205ENST00000555227 PRKAR2AP13861 404 aaKnown RBP17.09■□□□□ 0.33
LINC01578-205ENST00000555227 SSUH2Q9Y2M2 353 aa17.07■□□□□ 0.32
LINC01578-205ENST00000555227 MKRN4PQ13434 485 aaPredicted RBP17.06■□□□□ 0.32
LINC01578-205ENST00000555227 CLEC11AQ9Y240 323 aa17.06■□□□□ 0.32
LINC01578-205ENST00000555227 ZNF692Q9BU19 519 aaPredicted RBP17.03■□□□□ 0.32
LINC01578-205ENST00000555227 C19orf67A6NJJ6 358 aa16.96■□□□□ 0.31
LINC01578-205ENST00000555227 GABBR2O75899 941 aa16.77■□□□□ 0.28
LINC01578-205ENST00000555227 PRR29P0C7W0 189 aa16.76■□□□□ 0.27
LINC01578-205ENST00000555227 PABPN1Q86U42 306 aaKnown RBP eCLIP16.76■□□□□ 0.27
LINC01578-205ENST00000555227 CHADLQ6NUI6 762 aa16.75■□□□□ 0.27
LINC01578-205ENST00000555227 LHX8Q68G74 356 aa16.59■□□□□ 0.25
LINC01578-205ENST00000555227 CD44P16070 742 aaKnown RBP16.54■□□□□ 0.24
LINC01578-205ENST00000555227 FARP1Q9Y4F1 1045 aaPredicted RBP16.53■□□□□ 0.24
LINC01578-205ENST00000555227 CLCN6P51797 869 aa16.52■□□□□ 0.24
LINC01578-205ENST00000555227 POTEIP0CG38 1075 aa16.37■□□□□ 0.21
LINC01578-205ENST00000555227 SPDYE4A6NLX3 237 aa16.31■□□□□ 0.2
LINC01578-205ENST00000555227 ZNF579Q8NAF0 562 aaKnown RBP16.31■□□□□ 0.2
LINC01578-205ENST00000555227 STAG3Q9UJ98 1225 aa16.3■□□□□ 0.2
LINC01578-205ENST00000555227 DCBLD2Q96PD2 775 aa16.27■□□□□ 0.2
LINC01578-205ENST00000555227 CREBZFQ9NS37 354 aa16.23■□□□□ 0.19
LINC01578-205ENST00000555227 ZRANB1Q9UGI0 708 aa16.22■□□□□ 0.19
LINC01578-205ENST00000555227 PAK3O75914 559 aaPredicted RBP16.09■□□□□ 0.17
LINC01578-205ENST00000555227 GALR2O43603 387 aaPredicted RBP16.05■□□□□ 0.16
LINC01578-205ENST00000555227 NPM1P06748 294 aaKnown RBP eCLIP16■□□□□ 0.15
LINC01578-205ENST00000555227 PHF12Q96QT6 1004 aa15.94■□□□□ 0.14
LINC01578-205ENST00000555227 MNX1P50219 401 aaPredicted RBP15.9■□□□□ 0.14
LINC01578-205ENST00000555227 OTUD5Q96G74 571 aa15.87■□□□□ 0.13
LINC01578-205ENST00000555227 PROM2Q8N271 834 aa15.85■□□□□ 0.13
LINC01578-205ENST00000555227 PLSCR2Q9NRY7 297 aa15.82■□□□□ 0.12
LINC01578-205ENST00000555227 POTEB2H3BUK9 544 aa15.8■□□□□ 0.12
LINC01578-205ENST00000555227 FKBP8Q14318 412 aa15.77■□□□□ 0.12
LINC01578-205ENST00000555227 ASTLQ6HA08 431 aaPredicted RBP15.76■□□□□ 0.11
LINC01578-205ENST00000555227 PELP1Q8IZL8 1130 aaKnown RBP15.75■□□□□ 0.11
LINC01578-205ENST00000555227 MS4A3Q96HJ5 214 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms