RNA–Protein interactions for RNA: ENST00000558196.1

SEC11A-204, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 3

Gene SEC11A, Length 540 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-204ENST00000558196 AEBP2Q6ZN18 517 aaPredicted RBP22.95■■□□□ 1.26
SEC11A-204ENST00000558196 CHIC1Q5VXU3 224 aa22.34■■□□□ 1.17
SEC11A-204ENST00000558196 PHF23Q9BUL5 403 aaPredicted RBP19.72■□□□□ 0.75
SEC11A-204ENST00000558196 NISCHQ9Y2I1 1504 aa19.6■□□□□ 0.73
SEC11A-204ENST00000558196 SENP3Q9H4L4 574 aaPredicted RBP19.33■□□□□ 0.68
SEC11A-204ENST00000558196 PLPPR3Q6T4P5 718 aa18.1■□□□□ 0.49
SEC11A-204ENST00000558196 FOXD1Q16676 465 aa18.04■□□□□ 0.48
SEC11A-204ENST00000558196 ABCC9O60706 1549 aa17.58■□□□□ 0.41
SEC11A-204ENST00000558196 CCDC180Q9P1Z9 1646 aa17.5■□□□□ 0.39
SEC11A-204ENST00000558196 PPP6R1Q9UPN7 881 aa17.41■□□□□ 0.38
SEC11A-204ENST00000558196 ADRA2BP18089 450 aa17.4■□□□□ 0.38
SEC11A-204ENST00000558196 PIAS4Q8N2W9 510 aaPredicted RBP16.99■□□□□ 0.31
SEC11A-204ENST00000558196 RB1CC1Q8TDY2 1594 aa16.72■□□□□ 0.27
SEC11A-204ENST00000558196 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
SEC11A-204ENST00000558196 NACADO15069 1562 aa16.63■□□□□ 0.25
SEC11A-204ENST00000558196 DCAF8L2P0C7V8 631 aa16.55■□□□□ 0.24
SEC11A-204ENST00000558196 MSH5O43196 834 aa16.51■□□□□ 0.23
SEC11A-204ENST00000558196 MYO15BQ96JP2 1530 aa16.45■□□□□ 0.22
SEC11A-204ENST00000558196 PABPN1Q86U42 306 aaKnown RBP eCLIP16.43■□□□□ 0.22
SEC11A-204ENST00000558196 BICRAQ9NZM4 1560 aa16.26■□□□□ 0.19
SEC11A-204ENST00000558196 UNC13AQ9UPW8 1703 aa16.25■□□□□ 0.19
SEC11A-204ENST00000558196 ZCCHC6Q5VYS8 1495 aaKnown RBP16.22■□□□□ 0.19
SEC11A-204ENST00000558196 DCAF1Q9Y4B6 1507 aa16.21■□□□□ 0.19
SEC11A-204ENST00000558196 SHROOM4Q9ULL8 1493 aa16.06■□□□□ 0.16
SEC11A-204ENST00000558196 PPP4R3CPQ6ZMV5 832 aa16.01■□□□□ 0.15
SEC11A-204ENST00000558196 SCRIBQ14160 1630 aa15.93■□□□□ 0.14
SEC11A-204ENST00000558196 CECR2Q9BXF3 1484 aa15.87■□□□□ 0.13
SEC11A-204ENST00000558196 CC2D2AQ9P2K1 1620 aa15.86■□□□□ 0.13
SEC11A-204ENST00000558196 EIF4G1Q04637 1599 aaKnown RBP15.84■□□□□ 0.13
SEC11A-204ENST00000558196 MAPK8IP2Q13387 824 aaPredicted RBP15.81■□□□□ 0.12
SEC11A-204ENST00000558196 SCAF1Q9H7N4 1312 aaKnown RBP15.74■□□□□ 0.11
SEC11A-204ENST00000558196 KCNA4P22459 653 aa15.71■□□□□ 0.11
SEC11A-204ENST00000558196 CNKSR2Q8WXI2 1034 aa15.51■□□□□ 0.07
SEC11A-204ENST00000558196 NCBP3Q53F19 620 aaKnown RBP15.49■□□□□ 0.07
SEC11A-204ENST00000558196 DMRT2Q9Y5R5 561 aa15.46■□□□□ 0.07
SEC11A-204ENST00000558196 NCAPD3P42695 1498 aa15.41■□□□□ 0.06
SEC11A-204ENST00000558196 NPM3O75607 178 aaKnown RBP15.39■□□□□ 0.05
SEC11A-204ENST00000558196 ATAD2BQ9ULI0 1458 aa15.33■□□□□ 0.05
SEC11A-204ENST00000558196 DNAJC5Q9H3Z4 198 aa15.32■□□□□ 0.04
SEC11A-204ENST00000558196 SMARCA2P51531 1590 aa15.24■□□□□ 0.03
SEC11A-204ENST00000558196 SMARCA4P51532 1647 aa15.24■□□□□ 0.03
SEC11A-204ENST00000558196 HMGXB3Q12766 1538 aa15.22■□□□□ 0.03
SEC11A-204ENST00000558196 CUX2O14529 1486 aa15.2■□□□□ 0.02
SEC11A-204ENST00000558196 RNF216Q9NWF9 866 aaPredicted RBP15.19■□□□□ 0.02
SEC11A-204ENST00000558196 BAZ1AQ9NRL2 1556 aaPredicted RBP15.18■□□□□ 0.02
SEC11A-204ENST00000558196 ERCC6Q03468 1493 aa15.17■□□□□ 0.02
SEC11A-204ENST00000558196 HOXD11P31277 338 aaPredicted RBP15.14■□□□□ 0.01
SEC11A-204ENST00000558196 PEG3Q9GZU2 1588 aa15.14■□□□□ 0.01
SEC11A-204ENST00000558196 BAZ1BQ9UIG0 1483 aaKnown RBP15.13■□□□□ 0.01
SEC11A-204ENST00000558196 NESP48681 1621 aa15.11■□□□□ 0.01
SEC11A-204ENST00000558196 POTEDQ86YR6 584 aa15.11■□□□□ 0.01
SEC11A-204ENST00000558196 MROH2BQ7Z745 1585 aa15.08■□□□□ 0
SEC11A-204ENST00000558196 LAMC3Q9Y6N6 1575 aa14.99□□□□□ -0.01
SEC11A-204ENST00000558196 PDS5BQ9NTI5 1447 aa14.96□□□□□ -0.01
SEC11A-204ENST00000558196 CADPSQ9ULU8 1353 aa14.94□□□□□ -0.02
SEC11A-204ENST00000558196 THOC2Q8NI27 1593 aaKnown RBP14.92□□□□□ -0.02
SEC11A-204ENST00000558196 SLC4A1APQ9BWU0 796 aaKnown RBP14.91□□□□□ -0.02
SEC11A-204ENST00000558196 DCAF8L1A6NGE4 600 aa14.86□□□□□ -0.03
SEC11A-204ENST00000558196 WIZO95785 1651 aa14.84□□□□□ -0.03
SEC11A-204ENST00000558196 KIF21AQ7Z4S6 1674 aa14.83□□□□□ -0.04
SEC11A-204ENST00000558196 RSF1Q96T23 1441 aaPredicted RBP14.81□□□□□ -0.04
SEC11A-204ENST00000558196 MRC2Q9UBG0 1479 aa14.78□□□□□ -0.04
SEC11A-204ENST00000558196 WDR62O43379 1518 aa14.75□□□□□ -0.05
SEC11A-204ENST00000558196 CFTRP13569 1480 aa14.75□□□□□ -0.05
SEC11A-204ENST00000558196 FANCD2Q9BXW9 1451 aa14.71□□□□□ -0.05
SEC11A-204ENST00000558196 CEP164Q9UPV0 1460 aa14.7□□□□□ -0.06
SEC11A-204ENST00000558196 TOP2AP11388 1531 aaKnown RBP14.68□□□□□ -0.06
SEC11A-204ENST00000558196 URB2Q14146 1524 aaKnown RBP14.6□□□□□ -0.07
SEC11A-204ENST00000558196 EHMT2Q96KQ7 1210 aa14.59□□□□□ -0.07
SEC11A-204ENST00000558196 CCDC88BA6NC98 1476 aa14.57□□□□□ -0.08
SEC11A-204ENST00000558196 OSCARQ8IYS5 282 aa14.57□□□□□ -0.08
SEC11A-204ENST00000558196 SLC4A2P04920 1241 aa14.55□□□□□ -0.08
SEC11A-204ENST00000558196 TRIM41Q8WV44 630 aa14.53□□□□□ -0.08
SEC11A-204ENST00000558196 ZBTB22O15209 634 aa14.5□□□□□ -0.09
SEC11A-204ENST00000558196 IFT140Q96RY7 1462 aa14.45□□□□□ -0.1
SEC11A-204ENST00000558196 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.44□□□□□ -0.1
SEC11A-204ENST00000558196 TOPBP1Q92547 1522 aa14.43□□□□□ -0.1
SEC11A-204ENST00000558196 ABCC8Q09428 1581 aa14.43□□□□□ -0.1
SEC11A-204ENST00000558196 ZNF608Q9ULD9 1512 aaPredicted RBP14.42□□□□□ -0.1
SEC11A-204ENST00000558196 PRDM2Q13029 1718 aa14.41□□□□□ -0.1
SEC11A-204ENST00000558196 CSRNP3Q8WYN3 585 aa14.38□□□□□ -0.11
SEC11A-204ENST00000558196 FOXD4L1Q9NU39 408 aa14.38□□□□□ -0.11
SEC11A-204ENST00000558196 DNMBPQ6XZF7 1577 aa14.34□□□□□ -0.11
SEC11A-204ENST00000558196 AQRO60306 1485 aaKnown RBP eCLIP14.31□□□□□ -0.12
SEC11A-204ENST00000558196 TARBP1Q13395 1621 aaKnown RBP14.29□□□□□ -0.12
SEC11A-204ENST00000558196 POLA1P09884 1462 aaPredicted RBP14.28□□□□□ -0.12
SEC11A-204ENST00000558196 U3KPZ7 1027 aaPredicted RBP14.27□□□□□ -0.13
SEC11A-204ENST00000558196 EIF4G3O43432 1585 aaKnown RBP14.26□□□□□ -0.13
SEC11A-204ENST00000558196 RIMBP3CA6NJZ7 1639 aa14.26□□□□□ -0.13
SEC11A-204ENST00000558196 RIMBP3BA6NNM3 1639 aa14.26□□□□□ -0.13
SEC11A-204ENST00000558196 RIMBP3Q9UFD9 1639 aa14.26□□□□□ -0.13
SEC11A-204ENST00000558196 SOGA1O94964 1423 aa14.25□□□□□ -0.13
SEC11A-204ENST00000558196 ARHGEF11O15085 1522 aa14.24□□□□□ -0.13
SEC11A-204ENST00000558196 RAD54L2Q9Y4B4 1467 aa14.24□□□□□ -0.13
SEC11A-204ENST00000558196 TDRD9Q8NDG6 1382 aaKnown RBP14.22□□□□□ -0.13
SEC11A-204ENST00000558196 FBLN2P98095 1184 aa14.2□□□□□ -0.14
SEC11A-204ENST00000558196 CYB5RLQ6IPT4 315 aa14.2□□□□□ -0.14
SEC11A-204ENST00000558196 RNF39Q9H2S5 420 aa14.2□□□□□ -0.14
SEC11A-204ENST00000558196 FGD5Q6ZNL6 1462 aa14.17□□□□□ -0.14
SEC11A-204ENST00000558196 CUX1P39880 1505 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms