RNA–Protein interactions for RNA: ENST00000397256.5

ARPC4-TTLL3-201, Transcript of ARPC4-TTLL3 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ARPC4-TTLL3, Length 2,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC4-TTLL3-201ENST00000397256 NISCHQ9Y2I1 1504 aa28.56■■■□□ 2.16
ARPC4-TTLL3-201ENST00000397256 CCDC180Q9P1Z9 1646 aa25.42■■□□□ 1.66
ARPC4-TTLL3-201ENST00000397256 ABCC9O60706 1549 aa24.94■■□□□ 1.58
ARPC4-TTLL3-201ENST00000397256 HRCP23327 699 aa24.19■■□□□ 1.46
ARPC4-TTLL3-201ENST00000397256 RB1CC1Q8TDY2 1594 aa23.96■■□□□ 1.43
ARPC4-TTLL3-201ENST00000397256 NACADO15069 1562 aa23.94■■□□□ 1.42
ARPC4-TTLL3-201ENST00000397256 MYO15BQ96JP2 1530 aa23.81■■□□□ 1.4
ARPC4-TTLL3-201ENST00000397256 DCAF8L2P0C7V8 631 aa23.8■■□□□ 1.4
ARPC4-TTLL3-201ENST00000397256 ZCCHC6Q5VYS8 1495 aaKnown RBP23.77■■□□□ 1.4
ARPC4-TTLL3-201ENST00000397256 SHROOM4Q9ULL8 1493 aa23.69■■□□□ 1.38
ARPC4-TTLL3-201ENST00000397256 DCAF1Q9Y4B6 1507 aa23.66■■□□□ 1.38
ARPC4-TTLL3-201ENST00000397256 SUPT5HO00267 1087 aaKnown RBP23.62■■□□□ 1.37
ARPC4-TTLL3-201ENST00000397256 PCGF6Q9BYE7 350 aa23.57■■□□□ 1.36
ARPC4-TTLL3-201ENST00000397256 PPARGC1BQ86YN6 1023 aaKnown RBP23.57■■□□□ 1.36
ARPC4-TTLL3-201ENST00000397256 PELP1Q8IZL8 1130 aaKnown RBP23.47■■□□□ 1.35
ARPC4-TTLL3-201ENST00000397256 UNC13AQ9UPW8 1703 aa23.42■■□□□ 1.34
ARPC4-TTLL3-201ENST00000397256 CHIC1Q5VXU3 224 aa23.38■■□□□ 1.33
ARPC4-TTLL3-201ENST00000397256 PABPN1Q86U42 306 aaKnown RBP eCLIP23.3■■□□□ 1.322e-6■■□□□ 13.1
ARPC4-TTLL3-201ENST00000397256 BICRAQ9NZM4 1560 aa23.3■■□□□ 1.32
ARPC4-TTLL3-201ENST00000397256 SCRIBQ14160 1630 aa23.14■■□□□ 1.29
ARPC4-TTLL3-201ENST00000397256 DNAJC5BQ9UF47 199 aa23.07■■□□□ 1.28
ARPC4-TTLL3-201ENST00000397256 TRIM26Q12899 539 aaPredicted RBP22.89■■□□□ 1.25
ARPC4-TTLL3-201ENST00000397256 SCAF1Q9H7N4 1312 aaKnown RBP22.87■■□□□ 1.25
ARPC4-TTLL3-201ENST00000397256 ZEB1P37275 1124 aaPredicted RBP22.77■■□□□ 1.24
ARPC4-TTLL3-201ENST00000397256 LOC105371045A0A1W2PR82 267 aa22.75■■□□□ 1.23
ARPC4-TTLL3-201ENST00000397256 EIF4G1Q04637 1599 aaKnown RBP22.65■■□□□ 1.22
ARPC4-TTLL3-201ENST00000397256 MYT1Q01538 1121 aa22.59■■□□□ 1.21
ARPC4-TTLL3-201ENST00000397256 CC2D2AQ9P2K1 1620 aa22.58■■□□□ 1.2
ARPC4-TTLL3-201ENST00000397256 CECR2Q9BXF3 1484 aa22.44■■□□□ 1.18
ARPC4-TTLL3-201ENST00000397256 ACIN1Q9UKV3 1341 aaKnown RBP22.33■■□□□ 1.16
ARPC4-TTLL3-201ENST00000397256 NEUROD1Q13562 356 aa22.22■■□□□ 1.15
ARPC4-TTLL3-201ENST00000397256 SMARCA4P51532 1647 aa22.16■■□□□ 1.14
ARPC4-TTLL3-201ENST00000397256 NCAPD3P42695 1498 aa22.12■■□□□ 1.13
ARPC4-TTLL3-201ENST00000397256 BAZ1AQ9NRL2 1556 aaPredicted RBP22.12■■□□□ 1.13
ARPC4-TTLL3-201ENST00000397256 ATAD2BQ9ULI0 1458 aa22.1■■□□□ 1.13
ARPC4-TTLL3-201ENST00000397256 GTF3C3Q9Y5Q9 886 aa22.09■■□□□ 1.13
ARPC4-TTLL3-201ENST00000397256 SMARCA2P51531 1590 aa22.04■■□□□ 1.12
ARPC4-TTLL3-201ENST00000397256 CENPBP07199 599 aaPredicted RBP22.03■■□□□ 1.12
ARPC4-TTLL3-201ENST00000397256 MROH2BQ7Z745 1585 aa22■■□□□ 1.11
ARPC4-TTLL3-201ENST00000397256 PEG3Q9GZU2 1588 aa22■■□□□ 1.11
ARPC4-TTLL3-201ENST00000397256 HMGXB3Q12766 1538 aa21.97■■□□□ 1.11
ARPC4-TTLL3-201ENST00000397256 TRIM41Q8WV44 630 aa21.9■■□□□ 1.1
ARPC4-TTLL3-201ENST00000397256 DIEXFQ68CQ4 756 aaKnown RBP21.89■■□□□ 1.09
ARPC4-TTLL3-201ENST00000397256 BAZ1BQ9UIG0 1483 aaKnown RBP21.86■■□□□ 1.09
ARPC4-TTLL3-201ENST00000397256 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.83■■□□□ 1.08
ARPC4-TTLL3-201ENST00000397256 FAM9AQ8IZU1 332 aaPredicted RBP21.81■■□□□ 1.08
ARPC4-TTLL3-201ENST00000397256 CCER1Q8TC90 406 aaPredicted RBP21.81■■□□□ 1.08
ARPC4-TTLL3-201ENST00000397256 WIZO95785 1651 aa21.74■■□□□ 1.07
ARPC4-TTLL3-201ENST00000397256 RSF1Q96T23 1441 aaPredicted RBP21.73■■□□□ 1.07
ARPC4-TTLL3-201ENST00000397256 EHMT2Q96KQ7 1210 aa21.63■■□□□ 1.05
ARPC4-TTLL3-201ENST00000397256 NESP48681 1621 aa21.58■■□□□ 1.04
ARPC4-TTLL3-201ENST00000397256 TOP2AP11388 1531 aaKnown RBP21.51■■□□□ 1.03
ARPC4-TTLL3-201ENST00000397256 LAMC3Q9Y6N6 1575 aa21.51■■□□□ 1.03
ARPC4-TTLL3-201ENST00000397256 ZNF316A6NFI3 1004 aaPredicted RBP21.48■■□□□ 1.03
ARPC4-TTLL3-201ENST00000397256 ERCC6Q03468 1493 aa21.47■■□□□ 1.03
ARPC4-TTLL3-201ENST00000397256 CADPSQ9ULU8 1353 aa21.45■■□□□ 1.02
ARPC4-TTLL3-201ENST00000397256 YTHDC1Q96MU7 727 aaKnown RBP21.45■■□□□ 1.02
ARPC4-TTLL3-201ENST00000397256 PDS5BQ9NTI5 1447 aa21.36■■□□□ 1.01
ARPC4-TTLL3-201ENST00000397256 CUX2O14529 1486 aa21.35■■□□□ 1.01
ARPC4-TTLL3-201ENST00000397256 WRNQ14191 1432 aaPredicted RBP eCLIP21.32■■□□□ 1
ARPC4-TTLL3-201ENST00000397256 CFTRP13569 1480 aa21.31■■□□□ 1
ARPC4-TTLL3-201ENST00000397256 MIER1Q8N108 512 aa21.31■■□□□ 1
ARPC4-TTLL3-201ENST00000397256 KIF21AQ7Z4S6 1674 aa21.29■■□□□ 1
ARPC4-TTLL3-201ENST00000397256 CCDC88BA6NC98 1476 aa21.28■■□□□ 1
ARPC4-TTLL3-201ENST00000397256 THOC2Q8NI27 1593 aaKnown RBP21.28■■□□□ 1
ARPC4-TTLL3-201ENST00000397256 TTBK1Q5TCY1 1321 aaPredicted RBP21.22■□□□□ 0.99
ARPC4-TTLL3-201ENST00000397256 FANCD2Q9BXW9 1451 aa21.17■□□□□ 0.98
ARPC4-TTLL3-201ENST00000397256 MRC2Q9UBG0 1479 aa21.15■□□□□ 0.98
ARPC4-TTLL3-201ENST00000397256 CLSPNQ9HAW4 1339 aa21.14■□□□□ 0.98
ARPC4-TTLL3-201ENST00000397256 CEP164Q9UPV0 1460 aa21.14■□□□□ 0.97
ARPC4-TTLL3-201ENST00000397256 CEP162Q5TB80 1403 aa21.11■□□□□ 0.97
ARPC4-TTLL3-201ENST00000397256 WDR62O43379 1518 aa21.11■□□□□ 0.97
ARPC4-TTLL3-201ENST00000397256 PRDM2Q13029 1718 aa21.08■□□□□ 0.96
ARPC4-TTLL3-201ENST00000397256 ANP32EQ9BTT0 268 aa21.07■□□□□ 0.96
ARPC4-TTLL3-201ENST00000397256 SUPT16HQ9Y5B9 1047 aaKnown RBP21.06■□□□□ 0.96
ARPC4-TTLL3-201ENST00000397256 BCL11AQ9H165 835 aa21.03■□□□□ 0.96
ARPC4-TTLL3-201ENST00000397256 URB2Q14146 1524 aaKnown RBP20.99■□□□□ 0.95
ARPC4-TTLL3-201ENST00000397256 TNIKQ9UKE5 1360 aa20.99■□□□□ 0.95
ARPC4-TTLL3-201ENST00000397256 TSHZ2Q9NRE2 1034 aa20.99■□□□□ 0.95
ARPC4-TTLL3-201ENST00000397256 DNAJC5Q9H3Z4 198 aa20.85■□□□□ 0.93
ARPC4-TTLL3-201ENST00000397256 HNRNPUL2Q1KMD3 747 aaKnown RBP20.84■□□□□ 0.93
ARPC4-TTLL3-201ENST00000397256 TOPBP1Q92547 1522 aa20.84■□□□□ 0.93
ARPC4-TTLL3-201ENST00000397256 ABCC8Q09428 1581 aa20.83■□□□□ 0.93
ARPC4-TTLL3-201ENST00000397256 CSRNP3Q8WYN3 585 aa20.8■□□□□ 0.92
ARPC4-TTLL3-201ENST00000397256 DNMBPQ6XZF7 1577 aa20.79■□□□□ 0.92
ARPC4-TTLL3-201ENST00000397256 SOGA1O94964 1423 aa20.79■□□□□ 0.92
ARPC4-TTLL3-201ENST00000397256 EEA1Q15075 1411 aa20.77■□□□□ 0.92
ARPC4-TTLL3-201ENST00000397256 UBTFP17480 764 aaKnown RBP20.75■□□□□ 0.91
ARPC4-TTLL3-201ENST00000397256 IFT140Q96RY7 1462 aa20.73■□□□□ 0.91
ARPC4-TTLL3-201ENST00000397256 GOLGA3Q08378 1498 aa20.71■□□□□ 0.91
ARPC4-TTLL3-201ENST00000397256 RUSC2Q8N2Y8 1516 aa20.66■□□□□ 0.9
ARPC4-TTLL3-201ENST00000397256 POLA1P09884 1462 aaPredicted RBP20.65■□□□□ 0.9
ARPC4-TTLL3-201ENST00000397256 CUX1P39880 1505 aa20.65■□□□□ 0.9
ARPC4-TTLL3-201ENST00000397256 ZNF608Q9ULD9 1512 aaPredicted RBP20.65■□□□□ 0.9
ARPC4-TTLL3-201ENST00000397256 TARBP1Q13395 1621 aaKnown RBP20.63■□□□□ 0.89
ARPC4-TTLL3-201ENST00000397256 FGD5Q6ZNL6 1462 aa20.57■□□□□ 0.88
ARPC4-TTLL3-201ENST00000397256 DHX57Q6P158 1386 aaKnown RBP20.56■□□□□ 0.88
ARPC4-TTLL3-201ENST00000397256 RAD54L2Q9Y4B4 1467 aa20.56■□□□□ 0.88
ARPC4-TTLL3-201ENST00000397256 VPS8Q8N3P4 1428 aa20.54■□□□□ 0.88
ARPC4-TTLL3-201ENST00000397256 EIF4G3O43432 1585 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms