RNA–Protein interactions for RNA: ENST00000343677.3

HIST1H1C-201, Transcript of histone cluster 1 H1 family member c, humanhuman

APPRIS P1 BASIC

Gene HIST1H1C, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1C-201ENST00000343677 NISCHQ9Y2I1 1504 aa29.9■■■□□ 2.38
HIST1H1C-201ENST00000343677 CCDC180Q9P1Z9 1646 aa26.43■■□□□ 1.82
HIST1H1C-201ENST00000343677 ABCC9O60706 1549 aa25.74■■□□□ 1.71
HIST1H1C-201ENST00000343677 DCAF8L2P0C7V8 631 aa25.02■■□□□ 1.6
HIST1H1C-201ENST00000343677 ZCCHC6Q5VYS8 1495 aaKnown RBP24.96■■□□□ 1.59
HIST1H1C-201ENST00000343677 NACADO15069 1562 aa24.78■■□□□ 1.56
HIST1H1C-201ENST00000343677 RB1CC1Q8TDY2 1594 aa24.78■■□□□ 1.56
HIST1H1C-201ENST00000343677 DCAF1Q9Y4B6 1507 aa24.66■■□□□ 1.54
HIST1H1C-201ENST00000343677 MYO15BQ96JP2 1530 aa24.63■■□□□ 1.53
HIST1H1C-201ENST00000343677 UNC13AQ9UPW8 1703 aa24.3■■□□□ 1.48
HIST1H1C-201ENST00000343677 SCRIBQ14160 1630 aa24.28■■□□□ 1.48
HIST1H1C-201ENST00000343677 PABPN1Q86U42 306 aaKnown RBP eCLIP24.13■■□□□ 1.45
HIST1H1C-201ENST00000343677 BICRAQ9NZM4 1560 aa24.05■■□□□ 1.44
HIST1H1C-201ENST00000343677 SHROOM4Q9ULL8 1493 aa23.95■■□□□ 1.42
HIST1H1C-201ENST00000343677 EIF4G1Q04637 1599 aaKnown RBP23.4■■□□□ 1.34
HIST1H1C-201ENST00000343677 DNAJC5BQ9UF47 199 aa23.38■■□□□ 1.33
HIST1H1C-201ENST00000343677 CECR2Q9BXF3 1484 aa23.33■■□□□ 1.33
HIST1H1C-201ENST00000343677 CC2D2AQ9P2K1 1620 aa23.26■■□□□ 1.31
HIST1H1C-201ENST00000343677 SMARCA4P51532 1647 aa23.17■■□□□ 1.3
HIST1H1C-201ENST00000343677 BAZ1AQ9NRL2 1556 aaPredicted RBP23.14■■□□□ 1.3
HIST1H1C-201ENST00000343677 MROH2BQ7Z745 1585 aa23.1■■□□□ 1.29
HIST1H1C-201ENST00000343677 ATAD2BQ9ULI0 1458 aa22.95■■□□□ 1.26
HIST1H1C-201ENST00000343677 SMARCA2P51531 1590 aa22.92■■□□□ 1.26
HIST1H1C-201ENST00000343677 WIZO95785 1651 aa22.9■■□□□ 1.26
HIST1H1C-201ENST00000343677 RSF1Q96T23 1441 aaPredicted RBP22.9■■□□□ 1.26
HIST1H1C-201ENST00000343677 PEG3Q9GZU2 1588 aa22.86■■□□□ 1.25
HIST1H1C-201ENST00000343677 NCAPD3P42695 1498 aa22.85■■□□□ 1.25
HIST1H1C-201ENST00000343677 BAZ1BQ9UIG0 1483 aaKnown RBP22.81■■□□□ 1.24
HIST1H1C-201ENST00000343677 HMGXB3Q12766 1538 aa22.78■■□□□ 1.24
HIST1H1C-201ENST00000343677 SUPT5HO00267 1087 aaKnown RBP22.63■■□□□ 1.21
HIST1H1C-201ENST00000343677 TOP2AP11388 1531 aaKnown RBP22.6■■□□□ 1.21
HIST1H1C-201ENST00000343677 NESP48681 1621 aa22.36■■□□□ 1.17
HIST1H1C-201ENST00000343677 CCDC88BA6NC98 1476 aa22.35■■□□□ 1.17
HIST1H1C-201ENST00000343677 LAMC3Q9Y6N6 1575 aa22.24■■□□□ 1.15
HIST1H1C-201ENST00000343677 CADPSQ9ULU8 1353 aa22.24■■□□□ 1.15
HIST1H1C-201ENST00000343677 CFTRP13569 1480 aa22.15■■□□□ 1.14
HIST1H1C-201ENST00000343677 ERCC6Q03468 1493 aa22.15■■□□□ 1.14
HIST1H1C-201ENST00000343677 KIF21AQ7Z4S6 1674 aa22.1■■□□□ 1.13
HIST1H1C-201ENST00000343677 PDS5BQ9NTI5 1447 aa22.07■■□□□ 1.12
HIST1H1C-201ENST00000343677 PRDM2Q13029 1718 aa22.04■■□□□ 1.12
HIST1H1C-201ENST00000343677 FANCD2Q9BXW9 1451 aa22.02■■□□□ 1.12
HIST1H1C-201ENST00000343677 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
HIST1H1C-201ENST00000343677 THOC2Q8NI27 1593 aaKnown RBP21.91■■□□□ 1.1
HIST1H1C-201ENST00000343677 MRC2Q9UBG0 1479 aa21.87■■□□□ 1.09
HIST1H1C-201ENST00000343677 URB2Q14146 1524 aaKnown RBP21.8■■□□□ 1.08
HIST1H1C-201ENST00000343677 WDR62O43379 1518 aa21.77■■□□□ 1.08
HIST1H1C-201ENST00000343677 CUX2O14529 1486 aa21.72■■□□□ 1.07
HIST1H1C-201ENST00000343677 TOPBP1Q92547 1522 aa21.7■■□□□ 1.06
HIST1H1C-201ENST00000343677 ABCC8Q09428 1581 aa21.7■■□□□ 1.06
HIST1H1C-201ENST00000343677 DNMBPQ6XZF7 1577 aa21.68■■□□□ 1.06
HIST1H1C-201ENST00000343677 CUX1P39880 1505 aa21.65■■□□□ 1.06
HIST1H1C-201ENST00000343677 WRNQ14191 1432 aaPredicted RBP eCLIP21.59■■□□□ 1.05
HIST1H1C-201ENST00000343677 SYNJ1O43426 1573 aa21.57■■□□□ 1.04
HIST1H1C-201ENST00000343677 FGD5Q6ZNL6 1462 aa21.53■■□□□ 1.04
HIST1H1C-201ENST00000343677 POLA1P09884 1462 aaPredicted RBP21.52■■□□□ 1.04
HIST1H1C-201ENST00000343677 TOP2BQ02880 1626 aa21.5■■□□□ 1.03
HIST1H1C-201ENST00000343677 BIVM-ERCC5R4GMW8 1640 aa21.5■■□□□ 1.03
HIST1H1C-201ENST00000343677 RAD54L2Q9Y4B4 1467 aa21.49■■□□□ 1.03
HIST1H1C-201ENST00000343677 IFT140Q96RY7 1462 aa21.46■■□□□ 1.03
HIST1H1C-201ENST00000343677 SOGA1O94964 1423 aa21.45■■□□□ 1.02
HIST1H1C-201ENST00000343677 TARBP1Q13395 1621 aaKnown RBP21.43■■□□□ 1.02
HIST1H1C-201ENST00000343677 ZNF608Q9ULD9 1512 aaPredicted RBP21.41■■□□□ 1.02
HIST1H1C-201ENST00000343677 TDRD9Q8NDG6 1382 aaKnown RBP21.34■■□□□ 1.01
HIST1H1C-201ENST00000343677 WDR97A6NE52 1622 aa21.33■■□□□ 1.01
HIST1H1C-201ENST00000343677 EIF4G3O43432 1585 aaKnown RBP21.33■■□□□ 1.01
HIST1H1C-201ENST00000343677 AQRO60306 1485 aaKnown RBP eCLIP21.32■■□□□ 12e-9■□□□□ 9.2
HIST1H1C-201ENST00000343677 TRIM41Q8WV44 630 aa21.29■■□□□ 1
HIST1H1C-201ENST00000343677 ABCA10Q8WWZ4 1543 aa21.29■■□□□ 1
HIST1H1C-201ENST00000343677 ABCA5Q8WWZ7 1642 aa21.2■□□□□ 0.98
HIST1H1C-201ENST00000343677 CHIC1Q5VXU3 224 aa21.2■□□□□ 0.98
HIST1H1C-201ENST00000343677 GAPVD1Q14C86 1478 aa21.2■□□□□ 0.98
HIST1H1C-201ENST00000343677 PBRM1Q86U86 1689 aa21.18■□□□□ 0.98
HIST1H1C-201ENST00000343677 GRIN2BQ13224 1484 aa21.14■□□□□ 0.98
HIST1H1C-201ENST00000343677 SNAPC4Q5SXM2 1469 aa21.13■□□□□ 0.97
HIST1H1C-201ENST00000343677 KIF27Q86VH2 1401 aa21.1■□□□□ 0.97
HIST1H1C-201ENST00000343677 RUSC2Q8N2Y8 1516 aa21.08■□□□□ 0.96
HIST1H1C-201ENST00000343677 FBLN2P98095 1184 aa21.06■□□□□ 0.96
HIST1H1C-201ENST00000343677 CHD1O14646 1710 aa21.04■□□□□ 0.96
HIST1H1C-201ENST00000343677 MAGI1Q96QZ7 1491 aaPredicted RBP21.04■□□□□ 0.96
HIST1H1C-201ENST00000343677 ERICH3Q5RHP9 1530 aa21.02■□□□□ 0.96
HIST1H1C-201ENST00000343677 ADAMTS12P58397 1594 aa21.01■□□□□ 0.95
HIST1H1C-201ENST00000343677 CHMP7Q8WUX9 453 aaPredicted RBP20.98■□□□□ 0.95
HIST1H1C-201ENST00000343677 IGF1RP08069 1367 aa20.97■□□□□ 0.95
HIST1H1C-201ENST00000343677 SYNJ2O15056 1496 aa20.97■□□□□ 0.95
HIST1H1C-201ENST00000343677 FAM9AQ8IZU1 332 aaPredicted RBP20.96■□□□□ 0.95
HIST1H1C-201ENST00000343677 FHAD1B1AJZ9 1412 aa20.94■□□□□ 0.94
HIST1H1C-201ENST00000343677 CUL7Q14999 1698 aa20.91■□□□□ 0.94
HIST1H1C-201ENST00000343677 OSCARQ8IYS5 282 aa20.91■□□□□ 0.94
HIST1H1C-201ENST00000343677 GRIN2AQ12879 1464 aa20.88■□□□□ 0.93
HIST1H1C-201ENST00000343677 CARMIL1Q5VZK9 1371 aa20.87■□□□□ 0.93
HIST1H1C-201ENST00000343677 EEA1Q15075 1411 aa20.82■□□□□ 0.92
HIST1H1C-201ENST00000343677 CSRNP3Q8WYN3 585 aa20.82■□□□□ 0.92
HIST1H1C-201ENST00000343677 CEP170Q5SW79 1584 aa20.81■□□□□ 0.92
HIST1H1C-201ENST00000343677 DNAJC5Q9H3Z4 198 aa20.78■□□□□ 0.92
HIST1H1C-201ENST00000343677 RAPGEF2Q9Y4G8 1499 aa20.77■□□□□ 0.92
HIST1H1C-201ENST00000343677 CLASP1Q7Z460 1538 aa20.75■□□□□ 0.91
HIST1H1C-201ENST00000343677 EHMT2Q96KQ7 1210 aa20.75■□□□□ 0.91
HIST1H1C-201ENST00000343677 NUP160Q12769 1436 aa20.75■□□□□ 0.91
HIST1H1C-201ENST00000343677 PRXQ9BXM0 1461 aa20.75■□□□□ 0.91
HIST1H1C-201ENST00000343677 KIF21BO75037 1637 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms