RNA–Protein interactions for RNA: ENST00000483072.5

SMYD3-212, Transcript of SET and MYND domain containing 3, humanhuman

TSL 2

Gene SMYD3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-212ENST00000483072 NISCHQ9Y2I1 1504 aa21.2■□□□□ 0.98
SMYD3-212ENST00000483072 CCDC180Q9P1Z9 1646 aa19.03■□□□□ 0.64
SMYD3-212ENST00000483072 ABCC9O60706 1549 aa18.69■□□□□ 0.58
SMYD3-212ENST00000483072 AEBP2Q6ZN18 517 aaPredicted RBP18.62■□□□□ 0.57
SMYD3-212ENST00000483072 RB1CC1Q8TDY2 1594 aa17.98■□□□□ 0.47
SMYD3-212ENST00000483072 NACADO15069 1562 aa17.9■□□□□ 0.46
SMYD3-212ENST00000483072 DCAF8L2P0C7V8 631 aa17.75■□□□□ 0.43
SMYD3-212ENST00000483072 MYO15BQ96JP2 1530 aa17.72■□□□□ 0.43
SMYD3-212ENST00000483072 ZCCHC6Q5VYS8 1495 aaKnown RBP17.64■□□□□ 0.41
SMYD3-212ENST00000483072 DCAF1Q9Y4B6 1507 aa17.57■□□□□ 0.4
SMYD3-212ENST00000483072 UNC13AQ9UPW8 1703 aa17.56■□□□□ 0.4
SMYD3-212ENST00000483072 CHIC1Q5VXU3 224 aa17.45■□□□□ 0.38
SMYD3-212ENST00000483072 PABPN1Q86U42 306 aaKnown RBP eCLIP17.37■□□□□ 0.37
SMYD3-212ENST00000483072 BICRAQ9NZM4 1560 aa17.36■□□□□ 0.37
SMYD3-212ENST00000483072 SCRIBQ14160 1630 aa17.3■□□□□ 0.36
SMYD3-212ENST00000483072 SHROOM4Q9ULL8 1493 aa17.27■□□□□ 0.36
SMYD3-212ENST00000483072 DNAJC5BQ9UF47 199 aa17.19■□□□□ 0.34
SMYD3-212ENST00000483072 EIF4G1Q04637 1599 aaKnown RBP16.96■□□□□ 0.31
SMYD3-212ENST00000483072 CC2D2AQ9P2K1 1620 aa16.93■□□□□ 0.3
SMYD3-212ENST00000483072 CECR2Q9BXF3 1484 aa16.84■□□□□ 0.29
SMYD3-212ENST00000483072 SMARCA4P51532 1647 aa16.53■□□□□ 0.24
SMYD3-212ENST00000483072 BAZ1AQ9NRL2 1556 aaPredicted RBP16.5■□□□□ 0.23
SMYD3-212ENST00000483072 SMARCA2P51531 1590 aa16.48■□□□□ 0.23
SMYD3-212ENST00000483072 NCAPD3P42695 1498 aa16.46■□□□□ 0.23
SMYD3-212ENST00000483072 ATAD2BQ9ULI0 1458 aa16.43■□□□□ 0.22
SMYD3-212ENST00000483072 HMGXB3Q12766 1538 aa16.42■□□□□ 0.22
SMYD3-212ENST00000483072 PEG3Q9GZU2 1588 aa16.36■□□□□ 0.21
SMYD3-212ENST00000483072 BAZ1BQ9UIG0 1483 aaKnown RBP16.35■□□□□ 0.21
SMYD3-212ENST00000483072 MROH2BQ7Z745 1585 aa16.31■□□□□ 0.2
SMYD3-212ENST00000483072 ERCC6Q03468 1493 aa16.2■□□□□ 0.18
SMYD3-212ENST00000483072 WIZO95785 1651 aa16.16■□□□□ 0.18
SMYD3-212ENST00000483072 LAMC3Q9Y6N6 1575 aa16.13■□□□□ 0.17
SMYD3-212ENST00000483072 NESP48681 1621 aa16.09■□□□□ 0.17
SMYD3-212ENST00000483072 CUX2O14529 1486 aa16.09■□□□□ 0.17
SMYD3-212ENST00000483072 RSF1Q96T23 1441 aaPredicted RBP16.04■□□□□ 0.16
SMYD3-212ENST00000483072 TOP2AP11388 1531 aaKnown RBP16.01■□□□□ 0.15
SMYD3-212ENST00000483072 SENP3Q9H4L4 574 aaPredicted RBP16.01■□□□□ 0.15
SMYD3-212ENST00000483072 PDS5BQ9NTI5 1447 aa16■□□□□ 0.15
SMYD3-212ENST00000483072 KIF21AQ7Z4S6 1674 aa15.99■□□□□ 0.15
SMYD3-212ENST00000483072 CADPSQ9ULU8 1353 aa15.97■□□□□ 0.15
SMYD3-212ENST00000483072 THOC2Q8NI27 1593 aaKnown RBP15.96■□□□□ 0.15
SMYD3-212ENST00000483072 MRC2Q9UBG0 1479 aa15.84■□□□□ 0.13
SMYD3-212ENST00000483072 CEP164Q9UPV0 1460 aa15.84■□□□□ 0.13
SMYD3-212ENST00000483072 PRDM2Q13029 1718 aa15.84■□□□□ 0.13
SMYD3-212ENST00000483072 CFTRP13569 1480 aa15.84■□□□□ 0.13
SMYD3-212ENST00000483072 FANCD2Q9BXW9 1451 aa15.81■□□□□ 0.12
SMYD3-212ENST00000483072 WDR62O43379 1518 aa15.8■□□□□ 0.12
SMYD3-212ENST00000483072 CCDC88BA6NC98 1476 aa15.76■□□□□ 0.11
SMYD3-212ENST00000483072 DNAJC5Q9H3Z4 198 aa15.71■□□□□ 0.11
SMYD3-212ENST00000483072 PHF23Q9BUL5 403 aaPredicted RBP15.7■□□□□ 0.1
SMYD3-212ENST00000483072 URB2Q14146 1524 aaKnown RBP15.63■□□□□ 0.09
SMYD3-212ENST00000483072 ABCC8Q09428 1581 aa15.58■□□□□ 0.08
SMYD3-212ENST00000483072 DNMBPQ6XZF7 1577 aa15.53■□□□□ 0.08
SMYD3-212ENST00000483072 TOPBP1Q92547 1522 aa15.53■□□□□ 0.08
SMYD3-212ENST00000483072 IFT140Q96RY7 1462 aa15.51■□□□□ 0.07
SMYD3-212ENST00000483072 SUPT5HO00267 1087 aaKnown RBP15.49■□□□□ 0.07
SMYD3-212ENST00000483072 EIF4G3O43432 1585 aaKnown RBP15.41■□□□□ 0.06
SMYD3-212ENST00000483072 ZNF608Q9ULD9 1512 aaPredicted RBP15.38■□□□□ 0.05
SMYD3-212ENST00000483072 TARBP1Q13395 1621 aaKnown RBP15.38■□□□□ 0.05
SMYD3-212ENST00000483072 POLA1P09884 1462 aaPredicted RBP15.38■□□□□ 0.05
SMYD3-212ENST00000483072 WDR97A6NE52 1622 aa15.34■□□□□ 0.05
SMYD3-212ENST00000483072 CUX1P39880 1505 aa15.33■□□□□ 0.05
SMYD3-212ENST00000483072 FGD5Q6ZNL6 1462 aa15.33■□□□□ 0.04
SMYD3-212ENST00000483072 OSCARQ8IYS5 282 aa15.32■□□□□ 0.04
SMYD3-212ENST00000483072 SOGA1O94964 1423 aa15.31■□□□□ 0.04
SMYD3-212ENST00000483072 RAD54L2Q9Y4B4 1467 aa15.28■□□□□ 0.04
SMYD3-212ENST00000483072 AQRO60306 1485 aaKnown RBP eCLIP15.27■□□□□ 0.032e-6■■■□□ 16.9
SMYD3-212ENST00000483072 CHD1O14646 1710 aa15.26■□□□□ 0.03
SMYD3-212ENST00000483072 TDRD9Q8NDG6 1382 aaKnown RBP15.22■□□□□ 0.03
SMYD3-212ENST00000483072 BIVM-ERCC5R4GMW8 1640 aa15.21■□□□□ 0.03
SMYD3-212ENST00000483072 PBRM1Q86U86 1689 aa15.2■□□□□ 0.02
SMYD3-212ENST00000483072 TOP2BQ02880 1626 aa15.19■□□□□ 0.02
SMYD3-212ENST00000483072 GRIN2BQ13224 1484 aa15.19■□□□□ 0.02
SMYD3-212ENST00000483072 WRNQ14191 1432 aaPredicted RBP eCLIP15.18■□□□□ 0.02
SMYD3-212ENST00000483072 SNAPC4Q5SXM2 1469 aa15.18■□□□□ 0.02
SMYD3-212ENST00000483072 MAGI1Q96QZ7 1491 aaPredicted RBP15.18■□□□□ 0.02
SMYD3-212ENST00000483072 ABCA10Q8WWZ4 1543 aa15.17■□□□□ 0.02
SMYD3-212ENST00000483072 ABCA5Q8WWZ7 1642 aa15.16■□□□□ 0.02
SMYD3-212ENST00000483072 GAPVD1Q14C86 1478 aa15.15■□□□□ 0.02
SMYD3-212ENST00000483072 FBLN2P98095 1184 aa15.15■□□□□ 0.02
SMYD3-212ENST00000483072 SYNJ1O43426 1573 aa15.15■□□□□ 0.02
SMYD3-212ENST00000483072 RIMBP3CA6NJZ7 1639 aa15.14■□□□□ 0.01
SMYD3-212ENST00000483072 RIMBP3BA6NNM3 1639 aa15.14■□□□□ 0.01
SMYD3-212ENST00000483072 RIMBP3Q9UFD9 1639 aa15.14■□□□□ 0.01
SMYD3-212ENST00000483072 TRIM41Q8WV44 630 aa15.14■□□□□ 0.01
SMYD3-212ENST00000483072 SYNJ2O15056 1496 aa15.11■□□□□ 0.01
SMYD3-212ENST00000483072 ARHGEF11O15085 1522 aa15.11■□□□□ 0.01
SMYD3-212ENST00000483072 CHMP7Q8WUX9 453 aaPredicted RBP15.09■□□□□ 0.01
SMYD3-212ENST00000483072 CLASP1Q7Z460 1538 aa15.04■□□□□ -0
SMYD3-212ENST00000483072 ADAMTS12P58397 1594 aa15.03■□□□□ -0
SMYD3-212ENST00000483072 ERICH3Q5RHP9 1530 aa15.02□□□□□ -0.01
SMYD3-212ENST00000483072 GRIN2AQ12879 1464 aa14.99□□□□□ -0.01
SMYD3-212ENST00000483072 FHAD1B1AJZ9 1412 aa14.97□□□□□ -0.01
SMYD3-212ENST00000483072 ARAP1Q96P48 1450 aa14.95□□□□□ -0.02
SMYD3-212ENST00000483072 FOXD1Q16676 465 aa14.93□□□□□ -0.02
SMYD3-212ENST00000483072 CYB5RLQ6IPT4 315 aa14.92□□□□□ -0.02
SMYD3-212ENST00000483072 CEP170Q5SW79 1584 aa14.91□□□□□ -0.02
SMYD3-212ENST00000483072 NUP160Q12769 1436 aa14.9□□□□□ -0.02
SMYD3-212ENST00000483072 KIF27Q86VH2 1401 aa14.9□□□□□ -0.02
SMYD3-212ENST00000483072 CUL7Q14999 1698 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms