RNA–Protein interactions for RNA: ENST00000286448.11

VAMP7-202, Transcript of vesicle associated membrane protein 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP7, Length 2,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-202ENST00000286448 NISCHQ9Y2I1 1504 aa26.83■■□□□ 1.89
VAMP7-202ENST00000286448 SHROOM4Q9ULL8 1493 aa23.15■■□□□ 1.3
VAMP7-202ENST00000286448 CCDC180Q9P1Z9 1646 aa22.72■■□□□ 1.23
VAMP7-202ENST00000286448 ZCCHC6Q5VYS8 1495 aaKnown RBP22.66■■□□□ 1.22
VAMP7-202ENST00000286448 DCAF8L2P0C7V8 631 aa22.57■■□□□ 1.2
VAMP7-202ENST00000286448 SUPT5HO00267 1087 aaKnown RBP22.55■■□□□ 1.2
VAMP7-202ENST00000286448 HRCP23327 699 aa22.01■■□□□ 1.11
VAMP7-202ENST00000286448 MYO15BQ96JP2 1530 aa21.8■■□□□ 1.08
VAMP7-202ENST00000286448 DCAF1Q9Y4B6 1507 aa21.8■■□□□ 1.08
VAMP7-202ENST00000286448 CHIC1Q5VXU3 224 aa21.74■■□□□ 1.07
VAMP7-202ENST00000286448 SCRIBQ14160 1630 aa21.59■■□□□ 1.05
VAMP7-202ENST00000286448 PCGF6Q9BYE7 350 aa21.56■■□□□ 1.04
VAMP7-202ENST00000286448 ABCC9O60706 1549 aa21.5■■□□□ 1.03
VAMP7-202ENST00000286448 PPARGC1BQ86YN6 1023 aaKnown RBP21.46■■□□□ 1.03
VAMP7-202ENST00000286448 LOC105371045A0A1W2PR82 267 aa21.27■■□□□ 1
VAMP7-202ENST00000286448 RSF1Q96T23 1441 aaPredicted RBP21.26■□□□□ 0.99
VAMP7-202ENST00000286448 CECR2Q9BXF3 1484 aa21.14■□□□□ 0.97
VAMP7-202ENST00000286448 RB1CC1Q8TDY2 1594 aa21.13■□□□□ 0.97
VAMP7-202ENST00000286448 PELP1Q8IZL8 1130 aaKnown RBP21.09■□□□□ 0.97
VAMP7-202ENST00000286448 NACADO15069 1562 aa21.04■□□□□ 0.96
VAMP7-202ENST00000286448 MROH2BQ7Z745 1585 aa20.99■□□□□ 0.95
VAMP7-202ENST00000286448 TRIM26Q12899 539 aaPredicted RBP20.97■□□□□ 0.95
VAMP7-202ENST00000286448 EHMT2Q96KQ7 1210 aa20.92■□□□□ 0.94
VAMP7-202ENST00000286448 FAM9AQ8IZU1 332 aaPredicted RBP20.92■□□□□ 0.94
VAMP7-202ENST00000286448 WIZO95785 1651 aa20.9■□□□□ 0.94
VAMP7-202ENST00000286448 TRIM41Q8WV44 630 aa20.84■□□□□ 0.93
VAMP7-202ENST00000286448 ZEB1P37275 1124 aaPredicted RBP20.79■□□□□ 0.92
VAMP7-202ENST00000286448 SCAF1Q9H7N4 1312 aaKnown RBP20.71■□□□□ 0.91
VAMP7-202ENST00000286448 UNC13AQ9UPW8 1703 aa20.69■□□□□ 0.9
VAMP7-202ENST00000286448 PABPN1Q86U42 306 aaKnown RBP eCLIP20.62■□□□□ 0.89
VAMP7-202ENST00000286448 BAZ1AQ9NRL2 1556 aaPredicted RBP20.58■□□□□ 0.89
VAMP7-202ENST00000286448 SMARCA4P51532 1647 aa20.49■□□□□ 0.87
VAMP7-202ENST00000286448 EIF4G1Q04637 1599 aaKnown RBP20.47■□□□□ 0.87
VAMP7-202ENST00000286448 ABCC8Q09428 1581 aa20.45■□□□□ 0.86
VAMP7-202ENST00000286448 CCDC88BA6NC98 1476 aa20.4■□□□□ 0.86
VAMP7-202ENST00000286448 BICRAQ9NZM4 1560 aa20.4■□□□□ 0.86
VAMP7-202ENST00000286448 TOP2AP11388 1531 aaKnown RBP20.38■□□□□ 0.85
VAMP7-202ENST00000286448 SMARCA2P51531 1590 aa20.36■□□□□ 0.85
VAMP7-202ENST00000286448 ACIN1Q9UKV3 1341 aaKnown RBP20.27■□□□□ 0.84
VAMP7-202ENST00000286448 MYT1Q01538 1121 aa20.25■□□□□ 0.83
VAMP7-202ENST00000286448 SOGA1O94964 1423 aa20.2■□□□□ 0.82
VAMP7-202ENST00000286448 NEUROD1Q13562 356 aa20.19■□□□□ 0.82
VAMP7-202ENST00000286448 RUSC2Q8N2Y8 1516 aa20.18■□□□□ 0.82
VAMP7-202ENST00000286448 TTBK1Q5TCY1 1321 aaPredicted RBP20.18■□□□□ 0.82
VAMP7-202ENST00000286448 GTF3C3Q9Y5Q9 886 aa20.07■□□□□ 0.8
VAMP7-202ENST00000286448 CENPBP07199 599 aaPredicted RBP20.06■□□□□ 0.8
VAMP7-202ENST00000286448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.02■□□□□ 0.8
VAMP7-202ENST00000286448 CCER1Q8TC90 406 aaPredicted RBP20.01■□□□□ 0.79
VAMP7-202ENST00000286448 ATAD2BQ9ULI0 1458 aa19.99■□□□□ 0.79
VAMP7-202ENST00000286448 DIEXFQ68CQ4 756 aaKnown RBP19.99■□□□□ 0.79
VAMP7-202ENST00000286448 PEG3Q9GZU2 1588 aa19.97■□□□□ 0.79
VAMP7-202ENST00000286448 SYNJ1O43426 1573 aa19.95■□□□□ 0.78
VAMP7-202ENST00000286448 CEP162Q5TB80 1403 aa19.93■□□□□ 0.78
VAMP7-202ENST00000286448 WRNQ14191 1432 aaPredicted RBP eCLIP19.93■□□□□ 0.78
VAMP7-202ENST00000286448 BAZ1BQ9UIG0 1483 aaKnown RBP19.92■□□□□ 0.78
VAMP7-202ENST00000286448 UBTFP17480 764 aaKnown RBP19.9■□□□□ 0.78
VAMP7-202ENST00000286448 CSRNP3Q8WYN3 585 aa19.9■□□□□ 0.78
VAMP7-202ENST00000286448 RANGAP1P46060 587 aaPredicted RBP19.81■□□□□ 0.76
VAMP7-202ENST00000286448 TNIKQ9UKE5 1360 aa19.79■□□□□ 0.76
VAMP7-202ENST00000286448 GOLGA3Q08378 1498 aa19.72■□□□□ 0.75
VAMP7-202ENST00000286448 EEA1Q15075 1411 aa19.69■□□□□ 0.74
VAMP7-202ENST00000286448 RAPGEF2Q9Y4G8 1499 aa19.67■□□□□ 0.74
VAMP7-202ENST00000286448 ZNF316A6NFI3 1004 aaPredicted RBP19.65■□□□□ 0.74
VAMP7-202ENST00000286448 CEP164Q9UPV0 1460 aa19.59■□□□□ 0.73
VAMP7-202ENST00000286448 YTHDC1Q96MU7 727 aaKnown RBP19.58■□□□□ 0.72
VAMP7-202ENST00000286448 KIF21BO75037 1637 aa19.57■□□□□ 0.72
VAMP7-202ENST00000286448 TOP2BQ02880 1626 aa19.57■□□□□ 0.72
VAMP7-202ENST00000286448 CLIP1P30622 1438 aa19.56■□□□□ 0.72
VAMP7-202ENST00000286448 NCAPD3P42695 1498 aa19.53■□□□□ 0.72
VAMP7-202ENST00000286448 CUX1P39880 1505 aa19.52■□□□□ 0.72
VAMP7-202ENST00000286448 HNRNPUL2Q1KMD3 747 aaKnown RBP19.5■□□□□ 0.71
VAMP7-202ENST00000286448 HMGXB3Q12766 1538 aa19.48■□□□□ 0.71
VAMP7-202ENST00000286448 BIVM-ERCC5R4GMW8 1640 aa19.48■□□□□ 0.71
VAMP7-202ENST00000286448 MIER1Q8N108 512 aa19.47■□□□□ 0.71
VAMP7-202ENST00000286448 VPS8Q8N3P4 1428 aa19.41■□□□□ 0.7
VAMP7-202ENST00000286448 CFTRP13569 1480 aa19.38■□□□□ 0.69
VAMP7-202ENST00000286448 PRXQ9BXM0 1461 aa19.35■□□□□ 0.69
VAMP7-202ENST00000286448 ARAP1Q96P48 1450 aa19.32■□□□□ 0.68
VAMP7-202ENST00000286448 KANK4Q5T7N3 995 aaPredicted RBP19.31■□□□□ 0.68
VAMP7-202ENST00000286448 CC2D2AQ9P2K1 1620 aa19.26■□□□□ 0.67
VAMP7-202ENST00000286448 APLP2Q06481 763 aa19.26■□□□□ 0.67
VAMP7-202ENST00000286448 KIF27Q86VH2 1401 aa19.25■□□□□ 0.67
VAMP7-202ENST00000286448 CLSPNQ9HAW4 1339 aa19.24■□□□□ 0.67
VAMP7-202ENST00000286448 ERICH3Q5RHP9 1530 aa19.24■□□□□ 0.67
VAMP7-202ENST00000286448 CUX2O14529 1486 aa19.22■□□□□ 0.67
VAMP7-202ENST00000286448 CADPSQ9ULU8 1353 aa19.2■□□□□ 0.66
VAMP7-202ENST00000286448 DNAJC5BQ9UF47 199 aa19.19■□□□□ 0.66
VAMP7-202ENST00000286448 NESP48681 1621 aa19.18■□□□□ 0.66
VAMP7-202ENST00000286448 FGD5Q6ZNL6 1462 aa19.17■□□□□ 0.66
VAMP7-202ENST00000286448 PRDM2Q13029 1718 aa19.17■□□□□ 0.66
VAMP7-202ENST00000286448 SUPT16HQ9Y5B9 1047 aaKnown RBP19.16■□□□□ 0.66
VAMP7-202ENST00000286448 ARHGAP35Q9NRY4 1499 aa19.16■□□□□ 0.66
VAMP7-202ENST00000286448 IGF1RP08069 1367 aa19.15■□□□□ 0.66
VAMP7-202ENST00000286448 RAD54L2Q9Y4B4 1467 aa19.1■□□□□ 0.65
VAMP7-202ENST00000286448 P3H3Q8IVL6 736 aa19.1■□□□□ 0.65
VAMP7-202ENST00000286448 ITGAEP38570 1179 aa19.09■□□□□ 0.65
VAMP7-202ENST00000286448 FANCD2Q9BXW9 1451 aa19.07■□□□□ 0.64
VAMP7-202ENST00000286448 ANP32EQ9BTT0 268 aa19.04■□□□□ 0.64
VAMP7-202ENST00000286448 TSHZ2Q9NRE2 1034 aa19.04■□□□□ 0.64
VAMP7-202ENST00000286448 CARMIL1Q5VZK9 1371 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms