RNA–Protein interactions for RNA: ENST00000429238.2

AP000311.1-201, humanhuman

APPRIS P1 TSL 5 BASIC

Gene AP000311.1, Length 1,078 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000311.1-201ENST00000429238 NISCHQ9Y2I1 1504 aa24.1■■□□□ 1.45
AP000311.1-201ENST00000429238 ABCC9O60706 1549 aa22.42■■□□□ 1.18
AP000311.1-201ENST00000429238 CCDC180Q9P1Z9 1646 aa21.87■■□□□ 1.09
AP000311.1-201ENST00000429238 DNAJC5BQ9UF47 199 aa21.46■■□□□ 1.03
AP000311.1-201ENST00000429238 RB1CC1Q8TDY2 1594 aa21.12■□□□□ 0.97
AP000311.1-201ENST00000429238 NACADO15069 1562 aa20.83■□□□□ 0.92
AP000311.1-201ENST00000429238 PABPN1Q86U42 306 aaKnown RBP eCLIP20.82■□□□□ 0.92
AP000311.1-201ENST00000429238 DCAF8L2P0C7V8 631 aa20.77■□□□□ 0.92
AP000311.1-201ENST00000429238 UNC13AQ9UPW8 1703 aa20.58■□□□□ 0.88
AP000311.1-201ENST00000429238 BICRAQ9NZM4 1560 aa20.42■□□□□ 0.86
AP000311.1-201ENST00000429238 MYO15BQ96JP2 1530 aa20.32■□□□□ 0.84
AP000311.1-201ENST00000429238 CECR2Q9BXF3 1484 aa20.26■□□□□ 0.83
AP000311.1-201ENST00000429238 CC2D2AQ9P2K1 1620 aa20.2■□□□□ 0.82
AP000311.1-201ENST00000429238 DNAJC5Q9H3Z4 198 aa20.18■□□□□ 0.82
AP000311.1-201ENST00000429238 SHROOM4Q9ULL8 1493 aa20.16■□□□□ 0.82
AP000311.1-201ENST00000429238 EIF4G1Q04637 1599 aaKnown RBP20.02■□□□□ 0.8
AP000311.1-201ENST00000429238 SCRIBQ14160 1630 aa19.9■□□□□ 0.78
AP000311.1-201ENST00000429238 DCAF1Q9Y4B6 1507 aa19.85■□□□□ 0.77
AP000311.1-201ENST00000429238 ZCCHC6Q5VYS8 1495 aaKnown RBP19.81■□□□□ 0.76
AP000311.1-201ENST00000429238 CUX2O14529 1486 aa19.56■□□□□ 0.72
AP000311.1-201ENST00000429238 ERCC6Q03468 1493 aa19.48■□□□□ 0.71
AP000311.1-201ENST00000429238 NCAPD3P42695 1498 aa19.21■□□□□ 0.67
AP000311.1-201ENST00000429238 TRIM41Q8WV44 630 aa19.15■□□□□ 0.66
AP000311.1-201ENST00000429238 ATAD2BQ9ULI0 1458 aa19.07■□□□□ 0.64
AP000311.1-201ENST00000429238 NESP48681 1621 aa19.07■□□□□ 0.64
AP000311.1-201ENST00000429238 SMARCA2P51531 1590 aa19.03■□□□□ 0.64
AP000311.1-201ENST00000429238 HMGXB3Q12766 1538 aa19.01■□□□□ 0.63
AP000311.1-201ENST00000429238 THOC2Q8NI27 1593 aaKnown RBP18.96■□□□□ 0.63
AP000311.1-201ENST00000429238 SMARCA4P51532 1647 aa18.91■□□□□ 0.62
AP000311.1-201ENST00000429238 BAZ1BQ9UIG0 1483 aaKnown RBP18.9■□□□□ 0.62
AP000311.1-201ENST00000429238 LAMC3Q9Y6N6 1575 aa18.89■□□□□ 0.62
AP000311.1-201ENST00000429238 PDS5BQ9NTI5 1447 aa18.85■□□□□ 0.61
AP000311.1-201ENST00000429238 KIF21AQ7Z4S6 1674 aa18.82■□□□□ 0.6
AP000311.1-201ENST00000429238 BAZ1AQ9NRL2 1556 aaPredicted RBP18.77■□□□□ 0.6
AP000311.1-201ENST00000429238 PEG3Q9GZU2 1588 aa18.69■□□□□ 0.58
AP000311.1-201ENST00000429238 MRC2Q9UBG0 1479 aa18.67■□□□□ 0.58
AP000311.1-201ENST00000429238 OSCARQ8IYS5 282 aa18.66■□□□□ 0.58
AP000311.1-201ENST00000429238 CADPSQ9ULU8 1353 aa18.63■□□□□ 0.57
AP000311.1-201ENST00000429238 WDR62O43379 1518 aa18.59■□□□□ 0.57
AP000311.1-201ENST00000429238 MROH2BQ7Z745 1585 aa18.54■□□□□ 0.56
AP000311.1-201ENST00000429238 CEP164Q9UPV0 1460 aa18.51■□□□□ 0.55
AP000311.1-201ENST00000429238 FANCD2Q9BXW9 1451 aa18.41■□□□□ 0.54
AP000311.1-201ENST00000429238 RIMBP3CA6NJZ7 1639 aa18.38■□□□□ 0.53
AP000311.1-201ENST00000429238 RIMBP3BA6NNM3 1639 aa18.38■□□□□ 0.53
AP000311.1-201ENST00000429238 RIMBP3Q9UFD9 1639 aa18.38■□□□□ 0.53
AP000311.1-201ENST00000429238 WIZO95785 1651 aa18.31■□□□□ 0.52
AP000311.1-201ENST00000429238 TRHP20396 242 aaPredicted RBP18.3■□□□□ 0.52
AP000311.1-201ENST00000429238 CFTRP13569 1480 aa18.26■□□□□ 0.51
AP000311.1-201ENST00000429238 CYB5RLQ6IPT4 315 aa18.26■□□□□ 0.51
AP000311.1-201ENST00000429238 ARHGEF11O15085 1522 aa18.25■□□□□ 0.51
AP000311.1-201ENST00000429238 URB2Q14146 1524 aaKnown RBP18.25■□□□□ 0.51
AP000311.1-201ENST00000429238 AEBP2Q6ZN18 517 aaPredicted RBP18.22■□□□□ 0.51
AP000311.1-201ENST00000429238 IFT140Q96RY7 1462 aa18.15■□□□□ 0.5
AP000311.1-201ENST00000429238 ZNF608Q9ULD9 1512 aaPredicted RBP18.12■□□□□ 0.49
AP000311.1-201ENST00000429238 PRDM2Q13029 1718 aa18.06■□□□□ 0.48
AP000311.1-201ENST00000429238 FBLN2P98095 1184 aa18.05■□□□□ 0.48
AP000311.1-201ENST00000429238 TOP2AP11388 1531 aaKnown RBP18.04■□□□□ 0.48
AP000311.1-201ENST00000429238 ARAP1Q96P48 1450 aa18.01■□□□□ 0.47
AP000311.1-201ENST00000429238 EIF4G3O43432 1585 aaKnown RBP18■□□□□ 0.47
AP000311.1-201ENST00000429238 CHD1O14646 1710 aa18■□□□□ 0.47
AP000311.1-201ENST00000429238 TOPBP1Q92547 1522 aa17.99■□□□□ 0.47
AP000311.1-201ENST00000429238 ABCC8Q09428 1581 aa17.99■□□□□ 0.47
AP000311.1-201ENST00000429238 RSF1Q96T23 1441 aaPredicted RBP17.98■□□□□ 0.47
AP000311.1-201ENST00000429238 AQRO60306 1485 aaKnown RBP eCLIP17.93■□□□□ 0.465e-7■■■■□ 26.4
AP000311.1-201ENST00000429238 DNMBPQ6XZF7 1577 aa17.88■□□□□ 0.45
AP000311.1-201ENST00000429238 CCDC88BA6NC98 1476 aa17.86■□□□□ 0.45
AP000311.1-201ENST00000429238 TARBP1Q13395 1621 aaKnown RBP17.83■□□□□ 0.45
AP000311.1-201ENST00000429238 CHMP7Q8WUX9 453 aaPredicted RBP17.81■□□□□ 0.44
AP000311.1-201ENST00000429238 POLA1P09884 1462 aaPredicted RBP17.76■□□□□ 0.43
AP000311.1-201ENST00000429238 SYNJ1O43426 1573 aa17.76■□□□□ 0.43
AP000311.1-201ENST00000429238 TDRD9Q8NDG6 1382 aaKnown RBP17.76■□□□□ 0.43
AP000311.1-201ENST00000429238 SOGA1O94964 1423 aa17.74■□□□□ 0.43
AP000311.1-201ENST00000429238 CLASP1Q7Z460 1538 aa17.72■□□□□ 0.43
AP000311.1-201ENST00000429238 SNAPC4Q5SXM2 1469 aa17.72■□□□□ 0.43
AP000311.1-201ENST00000429238 RAD54L2Q9Y4B4 1467 aa17.72■□□□□ 0.43
AP000311.1-201ENST00000429238 WDR97A6NE52 1622 aa17.67■□□□□ 0.42
AP000311.1-201ENST00000429238 MAGI1Q96QZ7 1491 aaPredicted RBP17.67■□□□□ 0.42
AP000311.1-201ENST00000429238 GAPVD1Q14C86 1478 aa17.65■□□□□ 0.42
AP000311.1-201ENST00000429238 GRIN2BQ13224 1484 aa17.63■□□□□ 0.41
AP000311.1-201ENST00000429238 SYNJ2O15056 1496 aa17.62■□□□□ 0.41
AP000311.1-201ENST00000429238 FGD5Q6ZNL6 1462 aa17.59■□□□□ 0.41
AP000311.1-201ENST00000429238 PBRM1Q86U86 1689 aa17.5■□□□□ 0.39
AP000311.1-201ENST00000429238 CUX1P39880 1505 aa17.45■□□□□ 0.38
AP000311.1-201ENST00000429238 ERCC6L2Q5T890 1561 aa17.4■□□□□ 0.38
AP000311.1-201ENST00000429238 KIF13AQ9H1H9 1805 aa17.38■□□□□ 0.37
AP000311.1-201ENST00000429238 GRIN2AQ12879 1464 aa17.37■□□□□ 0.37
AP000311.1-201ENST00000429238 CEP170Q5SW79 1584 aa17.37■□□□□ 0.37
AP000311.1-201ENST00000429238 NPM1P06748 294 aaKnown RBP eCLIP17.36■□□□□ 0.37
AP000311.1-201ENST00000429238 ABCA10Q8WWZ4 1543 aa17.35■□□□□ 0.37
AP000311.1-201ENST00000429238 FAM69CQ0P6D2 419 aa17.34■□□□□ 0.37
AP000311.1-201ENST00000429238 ILDR1Q86SU0 546 aaPredicted RBP17.34■□□□□ 0.37
AP000311.1-201ENST00000429238 ABCA5Q8WWZ7 1642 aa17.34■□□□□ 0.37
AP000311.1-201ENST00000429238 NUP160Q12769 1436 aa17.3■□□□□ 0.36
AP000311.1-201ENST00000429238 SHROOM2Q13796 1616 aa17.28■□□□□ 0.36
AP000311.1-201ENST00000429238 ADAMTS12P58397 1594 aa17.26■□□□□ 0.35
AP000311.1-201ENST00000429238 FHAD1B1AJZ9 1412 aa17.25■□□□□ 0.35
AP000311.1-201ENST00000429238 PRG4Q92954 1404 aaPredicted RBP17.25■□□□□ 0.35
AP000311.1-201ENST00000429238 KDM4FA0A1W2PPD8 638 aa17.25■□□□□ 0.35
AP000311.1-201ENST00000429238 ABCC10Q5T3U5 1492 aa17.24■□□□□ 0.35
AP000311.1-201ENST00000429238 WRNQ14191 1432 aaPredicted RBP eCLIP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms