Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27■■□□□ 1.91
PCDHGC3Q9UN70 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27■■□□□ 1.91
PCDHGC3Q9UN70 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.99■■□□□ 1.91
PCDHGC3Q9UN70 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
PCDHGC3Q9UN70 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDHGC3Q9UN70 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.98■■□□□ 1.91
PCDHGC3Q9UN70 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.98■■□□□ 1.91
PCDHGC3Q9UN70 LINC01971-201ENST00000617888 1048 ntBASIC26.98■■□□□ 1.91
PCDHGC3Q9UN70 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHGC3Q9UN70 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHGC3Q9UN70 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHGC3Q9UN70 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.97■■□□□ 1.91
PCDHGC3Q9UN70 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
PCDHGC3Q9UN70 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHGC3Q9UN70 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHGC3Q9UN70 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.96■■□□□ 1.91
PCDHGC3Q9UN70 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHGC3Q9UN70 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.95■■□□□ 1.9
PCDHGC3Q9UN70 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PCDHGC3Q9UN70 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.94■■□□□ 1.9
PCDHGC3Q9UN70 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
PCDHGC3Q9UN70 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHGC3Q9UN70 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHGC3Q9UN70 ZNRF2P2-203ENST00000454624 420 ntBASIC26.93■■□□□ 1.9
PCDHGC3Q9UN70 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
PCDHGC3Q9UN70 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.92■■□□□ 1.9
PCDHGC3Q9UN70 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHGC3Q9UN70 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHGC3Q9UN70 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.91■■□□□ 1.9
PCDHGC3Q9UN70 AC110285.7-201ENST00000624417 1536 ntBASIC26.9■■□□□ 1.9
PCDHGC3Q9UN70 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHGC3Q9UN70 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
PCDHGC3Q9UN70 ABHD17AP4-201ENST00000411545 909 ntBASIC26.9■■□□□ 1.9
PCDHGC3Q9UN70 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHGC3Q9UN70 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
PCDHGC3Q9UN70 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
PCDHGC3Q9UN70 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHGC3Q9UN70 BX255925.1-201ENST00000566954 1854 ntBASIC26.88■■□□□ 1.89
PCDHGC3Q9UN70 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHGC3Q9UN70 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.88■■□□□ 1.89
PCDHGC3Q9UN70 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHGC3Q9UN70 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHGC3Q9UN70 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHGC3Q9UN70 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.87■■□□□ 1.89
PCDHGC3Q9UN70 AC018358.1-201ENST00000631079 1402 ntBASIC26.87■■□□□ 1.89
PCDHGC3Q9UN70 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHGC3Q9UN70 LINC01003-201ENST00000564834 1764 ntBASIC26.86■■□□□ 1.89
PCDHGC3Q9UN70 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.86■■□□□ 1.89
PCDHGC3Q9UN70 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.85■■□□□ 1.89
PCDHGC3Q9UN70 DUX4L13-201ENST00000554103 1267 ntBASIC26.85■■□□□ 1.89
PCDHGC3Q9UN70 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.85■■□□□ 1.89
PCDHGC3Q9UN70 DUX4L15-201ENST00000611059 1267 ntBASIC26.85■■□□□ 1.89
PCDHGC3Q9UN70 DUX4L11-201ENST00000611504 1267 ntBASIC26.85■■□□□ 1.89
PCDHGC3Q9UN70 DUX4L12-201ENST00000614593 1267 ntBASIC26.85■■□□□ 1.89
PCDHGC3Q9UN70 DUX4L23-201ENST00000615195 1269 ntBASIC26.85■■□□□ 1.89
PCDHGC3Q9UN70 DUX4L24-201ENST00000617576 1269 ntBASIC26.85■■□□□ 1.89
PCDHGC3Q9UN70 DUX4L22-201ENST00000618238 1269 ntBASIC26.85■■□□□ 1.89
PCDHGC3Q9UN70 DUX4L20-201ENST00000619712 1269 ntBASIC26.85■■□□□ 1.89
PCDHGC3Q9UN70 DUX4L14-201ENST00000621227 1267 ntBASIC26.85■■□□□ 1.89
PCDHGC3Q9UN70 DUX4L21-201ENST00000622058 1269 ntBASIC26.85■■□□□ 1.89
PCDHGC3Q9UN70 DUX4L10-201ENST00000622460 1267 ntBASIC26.85■■□□□ 1.89
PCDHGC3Q9UN70 DUX4L25-201ENST00000624915 1269 ntBASIC26.85■■□□□ 1.89
PCDHGC3Q9UN70 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHGC3Q9UN70 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHGC3Q9UN70 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.84■■□□□ 1.89
PCDHGC3Q9UN70 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHGC3Q9UN70 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHGC3Q9UN70 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
PCDHGC3Q9UN70 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHGC3Q9UN70 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHGC3Q9UN70 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHGC3Q9UN70 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
PCDHGC3Q9UN70 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
PCDHGC3Q9UN70 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHGC3Q9UN70 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
PCDHGC3Q9UN70 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHGC3Q9UN70 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHGC3Q9UN70 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHGC3Q9UN70 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHGC3Q9UN70 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.79■■□□□ 1.88
PCDHGC3Q9UN70 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
PCDHGC3Q9UN70 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
PCDHGC3Q9UN70 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.78■■□□□ 1.88
PCDHGC3Q9UN70 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PCDHGC3Q9UN70 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PCDHGC3Q9UN70 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
PCDHGC3Q9UN70 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHGC3Q9UN70 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.76■■□□□ 1.87
PCDHGC3Q9UN70 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHGC3Q9UN70 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.76■■□□□ 1.87
PCDHGC3Q9UN70 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHGC3Q9UN70 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.75■■□□□ 1.87
PCDHGC3Q9UN70 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHGC3Q9UN70 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.75■■□□□ 1.87
PCDHGC3Q9UN70 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHGC3Q9UN70 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
PCDHGC3Q9UN70 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.74■■□□□ 1.87
PCDHGC3Q9UN70 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHGC3Q9UN70 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
PCDHGC3Q9UN70 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms