Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.82■□□□□ 0.92
S1PR3Q99500 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
S1PR3Q99500 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.82■□□□□ 0.92
S1PR3Q99500 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
S1PR3Q99500 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.81■□□□□ 0.92
S1PR3Q99500 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
S1PR3Q99500 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
S1PR3Q99500 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.8■□□□□ 0.92
S1PR3Q99500 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
S1PR3Q99500 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
S1PR3Q99500 BX255925.1-201ENST00000566954 1854 ntBASIC20.8■□□□□ 0.92
S1PR3Q99500 AC135983.2-203ENST00000454486 1613 ntBASIC20.8■□□□□ 0.92
S1PR3Q99500 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
S1PR3Q99500 LINC00273-201ENST00000539813 1452 ntBASIC20.8■□□□□ 0.92
S1PR3Q99500 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
S1PR3Q99500 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
S1PR3Q99500 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
S1PR3Q99500 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
S1PR3Q99500 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
S1PR3Q99500 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.78■□□□□ 0.92
S1PR3Q99500 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
S1PR3Q99500 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.78■□□□□ 0.92
S1PR3Q99500 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
S1PR3Q99500 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
S1PR3Q99500 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.77■□□□□ 0.92
S1PR3Q99500 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
S1PR3Q99500 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
S1PR3Q99500 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
S1PR3Q99500 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.77■□□□□ 0.92
S1PR3Q99500 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
S1PR3Q99500 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
S1PR3Q99500 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
S1PR3Q99500 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.76■□□□□ 0.91
S1PR3Q99500 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
S1PR3Q99500 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
S1PR3Q99500 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
S1PR3Q99500 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.75■□□□□ 0.91
S1PR3Q99500 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.75■□□□□ 0.91
S1PR3Q99500 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
S1PR3Q99500 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.75■□□□□ 0.91
S1PR3Q99500 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.75■□□□□ 0.91
S1PR3Q99500 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
S1PR3Q99500 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
S1PR3Q99500 WHAMMP2-203ENST00000563942 1603 ntBASIC20.74■□□□□ 0.91
S1PR3Q99500 AP002414.2-202ENST00000590929 1450 ntBASIC20.74■□□□□ 0.91
S1PR3Q99500 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
S1PR3Q99500 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
S1PR3Q99500 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.72■□□□□ 0.91
S1PR3Q99500 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
S1PR3Q99500 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
S1PR3Q99500 AL121749.1-202ENST00000609313 2153 ntBASIC20.72■□□□□ 0.91
S1PR3Q99500 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
S1PR3Q99500 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
S1PR3Q99500 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
S1PR3Q99500 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.71■□□□□ 0.91
S1PR3Q99500 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
S1PR3Q99500 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
S1PR3Q99500 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.71■□□□□ 0.91
S1PR3Q99500 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.71■□□□□ 0.91
S1PR3Q99500 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
S1PR3Q99500 LINC01003-201ENST00000564834 1764 ntBASIC20.7■□□□□ 0.9
S1PR3Q99500 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.7■□□□□ 0.9
S1PR3Q99500 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
S1PR3Q99500 DUX4L29-201ENST00000425409 679 ntBASIC20.69■□□□□ 0.9
S1PR3Q99500 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
S1PR3Q99500 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
S1PR3Q99500 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
S1PR3Q99500 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.68■□□□□ 0.9
S1PR3Q99500 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
S1PR3Q99500 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
S1PR3Q99500 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
S1PR3Q99500 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
S1PR3Q99500 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
S1PR3Q99500 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
S1PR3Q99500 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.67■□□□□ 0.9
S1PR3Q99500 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.66■□□□□ 0.9
S1PR3Q99500 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
S1PR3Q99500 AC021231.2-201ENST00000594613 730 ntBASIC20.66■□□□□ 0.9
S1PR3Q99500 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
S1PR3Q99500 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
S1PR3Q99500 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
S1PR3Q99500 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.65■□□□□ 0.9
S1PR3Q99500 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
S1PR3Q99500 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
S1PR3Q99500 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.64■□□□□ 0.89
S1PR3Q99500 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.64■□□□□ 0.89
S1PR3Q99500 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
S1PR3Q99500 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
S1PR3Q99500 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
S1PR3Q99500 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
S1PR3Q99500 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.63■□□□□ 0.89
S1PR3Q99500 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.63■□□□□ 0.89
S1PR3Q99500 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
S1PR3Q99500 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
S1PR3Q99500 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
S1PR3Q99500 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.62■□□□□ 0.89
S1PR3Q99500 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.62■□□□□ 0.89
S1PR3Q99500 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
S1PR3Q99500 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
S1PR3Q99500 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms