Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.81■■■□□ 2.68
RPGRQ92834 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC31.81■■■□□ 2.68
RPGRQ92834 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
RPGRQ92834 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC31.8■■■□□ 2.68
RPGRQ92834 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
RPGRQ92834 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.8■■■□□ 2.68
RPGRQ92834 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
RPGRQ92834 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
RPGRQ92834 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
RPGRQ92834 AC092296.2-201ENST00000589470 999 ntBASIC31.78■■■□□ 2.68
RPGRQ92834 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
RPGRQ92834 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC31.77■■■□□ 2.68
RPGRQ92834 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.77■■■□□ 2.68
RPGRQ92834 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
RPGRQ92834 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
RPGRQ92834 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
RPGRQ92834 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
RPGRQ92834 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
RPGRQ92834 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
RPGRQ92834 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
RPGRQ92834 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
RPGRQ92834 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.73■■■□□ 2.67
RPGRQ92834 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
RPGRQ92834 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
RPGRQ92834 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC31.72■■■□□ 2.67
RPGRQ92834 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
RPGRQ92834 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
RPGRQ92834 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
RPGRQ92834 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
RPGRQ92834 ECEL1P2-201ENST00000461596 1295 ntBASIC31.7■■■□□ 2.67
RPGRQ92834 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC31.7■■■□□ 2.67
RPGRQ92834 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
RPGRQ92834 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.69■■■□□ 2.66
RPGRQ92834 KRT18P60-201ENST00000312876 1297 ntBASIC31.69■■■□□ 2.66
RPGRQ92834 AC126177.7-201ENST00000547904 679 ntBASIC31.69■■■□□ 2.66
RPGRQ92834 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC31.69■■■□□ 2.66
RPGRQ92834 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
RPGRQ92834 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
RPGRQ92834 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
RPGRQ92834 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
RPGRQ92834 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
RPGRQ92834 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
RPGRQ92834 TSPY13P-201ENST00000338964 914 ntBASIC31.67■■■□□ 2.66
RPGRQ92834 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC31.67■■■□□ 2.66
RPGRQ92834 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
RPGRQ92834 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
RPGRQ92834 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
RPGRQ92834 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.66■■■□□ 2.66
RPGRQ92834 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.65■■■□□ 2.66
RPGRQ92834 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
RPGRQ92834 AC004987.1-201ENST00000428627 508 ntBASIC31.64■■■□□ 2.66
RPGRQ92834 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC31.64■■■□□ 2.66
RPGRQ92834 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
RPGRQ92834 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
RPGRQ92834 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
RPGRQ92834 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
RPGRQ92834 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
RPGRQ92834 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC31.63■■■□□ 2.65
RPGRQ92834 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
RPGRQ92834 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
RPGRQ92834 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
RPGRQ92834 ATP5G2P3-201ENST00000429083 425 ntBASIC31.62■■■□□ 2.65
RPGRQ92834 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.62■■■□□ 2.65
RPGRQ92834 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
RPGRQ92834 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.62■■■□□ 2.65
RPGRQ92834 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
RPGRQ92834 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC31.61■■■□□ 2.65
RPGRQ92834 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
RPGRQ92834 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.61■■■□□ 2.65
RPGRQ92834 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.61■■■□□ 2.65
RPGRQ92834 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
RPGRQ92834 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
RPGRQ92834 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
RPGRQ92834 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
RPGRQ92834 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
RPGRQ92834 MOB2-207ENST00000614710 705 ntTSL 5 BASIC31.58■■■□□ 2.65
RPGRQ92834 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC31.58■■■□□ 2.65
RPGRQ92834 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
RPGRQ92834 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.56■■■□□ 2.64
RPGRQ92834 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
RPGRQ92834 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
RPGRQ92834 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
RPGRQ92834 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
RPGRQ92834 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.54■■■□□ 2.64
RPGRQ92834 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
RPGRQ92834 GUK1-208ENST00000366728 842 ntTSL 2 BASIC31.54■■■□□ 2.64
RPGRQ92834 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC31.54■■■□□ 2.64
RPGRQ92834 AL157400.5-201ENST00000507624 621 ntBASIC31.54■■■□□ 2.64
RPGRQ92834 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
RPGRQ92834 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC31.54■■■□□ 2.64
RPGRQ92834 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31.53■■■□□ 2.64
RPGRQ92834 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
RPGRQ92834 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
RPGRQ92834 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
RPGRQ92834 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC31.52■■■□□ 2.64
RPGRQ92834 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
RPGRQ92834 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.52■■■□□ 2.64
RPGRQ92834 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
RPGRQ92834 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
RPGRQ92834 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms