Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
SMARCC2Q8TAQ2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.84■■■□□ 2.37
SMARCC2Q8TAQ2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
SMARCC2Q8TAQ2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC29.84■■■□□ 2.37
SMARCC2Q8TAQ2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
SMARCC2Q8TAQ2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
SMARCC2Q8TAQ2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC29.84■■■□□ 2.37
SMARCC2Q8TAQ2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SMARCC2Q8TAQ2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
SMARCC2Q8TAQ2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
SMARCC2Q8TAQ2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
SMARCC2Q8TAQ2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
SMARCC2Q8TAQ2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SMARCC2Q8TAQ2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC29.81■■■□□ 2.36
SMARCC2Q8TAQ2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
SMARCC2Q8TAQ2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC29.8■■■□□ 2.36
SMARCC2Q8TAQ2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.8■■■□□ 2.36
SMARCC2Q8TAQ2 WHAMMP2-203ENST00000563942 1603 ntBASIC29.79■■■□□ 2.36
SMARCC2Q8TAQ2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.79■■■□□ 2.36
SMARCC2Q8TAQ2 LINC01971-201ENST00000617888 1048 ntBASIC29.79■■■□□ 2.36
SMARCC2Q8TAQ2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
SMARCC2Q8TAQ2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SMARCC2Q8TAQ2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC29.78■■■□□ 2.36
SMARCC2Q8TAQ2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
SMARCC2Q8TAQ2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.78■■■□□ 2.36
SMARCC2Q8TAQ2 LINC00273-201ENST00000539813 1452 ntBASIC29.78■■■□□ 2.36
SMARCC2Q8TAQ2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
SMARCC2Q8TAQ2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SMARCC2Q8TAQ2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.77■■■□□ 2.36
SMARCC2Q8TAQ2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SMARCC2Q8TAQ2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SMARCC2Q8TAQ2 BX255925.1-201ENST00000566954 1854 ntBASIC29.76■■■□□ 2.36
SMARCC2Q8TAQ2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC29.76■■■□□ 2.35
SMARCC2Q8TAQ2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC29.76■■■□□ 2.35
SMARCC2Q8TAQ2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SMARCC2Q8TAQ2 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SMARCC2Q8TAQ2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SMARCC2Q8TAQ2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SMARCC2Q8TAQ2 DUX4L11-201ENST00000611504 1267 ntBASIC29.74■■■□□ 2.35
SMARCC2Q8TAQ2 DUX4L12-201ENST00000614593 1267 ntBASIC29.74■■■□□ 2.35
SMARCC2Q8TAQ2 DUX4L14-201ENST00000621227 1267 ntBASIC29.74■■■□□ 2.35
SMARCC2Q8TAQ2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SMARCC2Q8TAQ2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC29.74■■■□□ 2.35
SMARCC2Q8TAQ2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
SMARCC2Q8TAQ2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC29.73■■■□□ 2.35
SMARCC2Q8TAQ2 AP002414.2-202ENST00000590929 1450 ntBASIC29.73■■■□□ 2.35
SMARCC2Q8TAQ2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
SMARCC2Q8TAQ2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.72■■■□□ 2.35
SMARCC2Q8TAQ2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
SMARCC2Q8TAQ2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC29.71■■■□□ 2.35
SMARCC2Q8TAQ2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
SMARCC2Q8TAQ2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
SMARCC2Q8TAQ2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC29.7■■■□□ 2.34
SMARCC2Q8TAQ2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
SMARCC2Q8TAQ2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
SMARCC2Q8TAQ2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC29.7■■■□□ 2.34
SMARCC2Q8TAQ2 LINC01003-201ENST00000564834 1764 ntBASIC29.69■■■□□ 2.34
SMARCC2Q8TAQ2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC29.69■■■□□ 2.34
SMARCC2Q8TAQ2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
SMARCC2Q8TAQ2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.68■■■□□ 2.34
SMARCC2Q8TAQ2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC29.68■■■□□ 2.34
SMARCC2Q8TAQ2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.67■■■□□ 2.34
SMARCC2Q8TAQ2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
SMARCC2Q8TAQ2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SMARCC2Q8TAQ2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
SMARCC2Q8TAQ2 HLA-V-202ENST00000446817 847 ntBASIC29.66■■■□□ 2.34
SMARCC2Q8TAQ2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.66■■■□□ 2.34
SMARCC2Q8TAQ2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SMARCC2Q8TAQ2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC29.66■■■□□ 2.34
SMARCC2Q8TAQ2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC29.66■■■□□ 2.34
SMARCC2Q8TAQ2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
SMARCC2Q8TAQ2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.65■■■□□ 2.34
SMARCC2Q8TAQ2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
SMARCC2Q8TAQ2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SMARCC2Q8TAQ2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
SMARCC2Q8TAQ2 AL121749.1-202ENST00000609313 2153 ntBASIC29.64■■■□□ 2.34
SMARCC2Q8TAQ2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
SMARCC2Q8TAQ2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.64■■■□□ 2.34
SMARCC2Q8TAQ2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.64■■■□□ 2.34
SMARCC2Q8TAQ2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.34
SMARCC2Q8TAQ2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC29.63■■■□□ 2.33
SMARCC2Q8TAQ2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC29.63■■■□□ 2.33
SMARCC2Q8TAQ2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.63■■■□□ 2.33
SMARCC2Q8TAQ2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.62■■■□□ 2.33
SMARCC2Q8TAQ2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
SMARCC2Q8TAQ2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.61■■■□□ 2.33
SMARCC2Q8TAQ2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.61■■■□□ 2.33
SMARCC2Q8TAQ2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
SMARCC2Q8TAQ2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC29.61■■■□□ 2.33
SMARCC2Q8TAQ2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
SMARCC2Q8TAQ2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
SMARCC2Q8TAQ2 MIR3648-2-201ENST00000581792 180 ntBASIC29.6■■■□□ 2.33
SMARCC2Q8TAQ2 MIR3648-1-201ENST00000615959 180 ntBASIC29.6■■■□□ 2.33
SMARCC2Q8TAQ2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SMARCC2Q8TAQ2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC29.59■■■□□ 2.33
SMARCC2Q8TAQ2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SMARCC2Q8TAQ2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
SMARCC2Q8TAQ2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC29.59■■■□□ 2.33
SMARCC2Q8TAQ2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC29.59■■■□□ 2.33
SMARCC2Q8TAQ2 DUX4L13-201ENST00000554103 1267 ntBASIC29.58■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms