Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC71LQ8N9Z2 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC71LQ8N9Z2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC71LQ8N9Z2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC71LQ8N9Z2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC71LQ8N9Z2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC71LQ8N9Z2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC71LQ8N9Z2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21■□□□□ 0.95
CCDC71LQ8N9Z2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CCDC71LQ8N9Z2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC71LQ8N9Z2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC71LQ8N9Z2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC71LQ8N9Z2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC71LQ8N9Z2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC71LQ8N9Z2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC71LQ8N9Z2 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC71LQ8N9Z2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CCDC71LQ8N9Z2 AC135731.1-201ENST00000569415 2548 ntBASIC20.98■□□□□ 0.95
CCDC71LQ8N9Z2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC71LQ8N9Z2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC71LQ8N9Z2 AC100797.4-201ENST00000631653 1827 ntBASIC20.98■□□□□ 0.95
CCDC71LQ8N9Z2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC71LQ8N9Z2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC71LQ8N9Z2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC71LQ8N9Z2 AP002414.2-202ENST00000590929 1450 ntBASIC20.97■□□□□ 0.95
CCDC71LQ8N9Z2 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.97■□□□□ 0.95
CCDC71LQ8N9Z2 AL449106.1-201ENST00000608517 1980 ntBASIC20.97■□□□□ 0.95
CCDC71LQ8N9Z2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC71LQ8N9Z2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC71LQ8N9Z2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC71LQ8N9Z2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC71LQ8N9Z2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC71LQ8N9Z2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CCDC71LQ8N9Z2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CCDC71LQ8N9Z2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC71LQ8N9Z2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC71LQ8N9Z2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CCDC71LQ8N9Z2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC71LQ8N9Z2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CCDC71LQ8N9Z2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC71LQ8N9Z2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC71LQ8N9Z2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC71LQ8N9Z2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.94■□□□□ 0.94
CCDC71LQ8N9Z2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC71LQ8N9Z2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC71LQ8N9Z2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC71LQ8N9Z2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC71LQ8N9Z2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC71LQ8N9Z2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC71LQ8N9Z2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC71LQ8N9Z2 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC71LQ8N9Z2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC71LQ8N9Z2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC71LQ8N9Z2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCDC71LQ8N9Z2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC71LQ8N9Z2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC71LQ8N9Z2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC71LQ8N9Z2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC71LQ8N9Z2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC71LQ8N9Z2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC71LQ8N9Z2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
CCDC71LQ8N9Z2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC71LQ8N9Z2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CCDC71LQ8N9Z2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC71LQ8N9Z2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC71LQ8N9Z2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC71LQ8N9Z2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC71LQ8N9Z2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC71LQ8N9Z2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC71LQ8N9Z2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC71LQ8N9Z2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC71LQ8N9Z2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC71LQ8N9Z2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC71LQ8N9Z2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC71LQ8N9Z2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC71LQ8N9Z2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC71LQ8N9Z2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CCDC71LQ8N9Z2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC71LQ8N9Z2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC71LQ8N9Z2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC71LQ8N9Z2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC71LQ8N9Z2 AC091060.1-201ENST00000623524 1766 ntBASIC20.86■□□□□ 0.93
CCDC71LQ8N9Z2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC71LQ8N9Z2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC71LQ8N9Z2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC71LQ8N9Z2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC71LQ8N9Z2 RARRES2P7-201ENST00000567349 469 ntBASIC20.85■□□□□ 0.93
CCDC71LQ8N9Z2 SETD8P1-201ENST00000623146 1180 ntBASIC20.85■□□□□ 0.93
CCDC71LQ8N9Z2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC71LQ8N9Z2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC71LQ8N9Z2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC71LQ8N9Z2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC71LQ8N9Z2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC71LQ8N9Z2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC71LQ8N9Z2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.83■□□□□ 0.93
CCDC71LQ8N9Z2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.83■□□□□ 0.93
CCDC71LQ8N9Z2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC71LQ8N9Z2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.83■□□□□ 0.92
CCDC71LQ8N9Z2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC71LQ8N9Z2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms