Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF546Q86UE3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF546Q86UE3 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF546Q86UE3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF546Q86UE3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
ZNF546Q86UE3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
ZNF546Q86UE3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF546Q86UE3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF546Q86UE3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF546Q86UE3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF546Q86UE3 AC145676.1-201ENST00000514988 2004 ntBASIC21.01■□□□□ 0.95
ZNF546Q86UE3 ZNRF2P1-201ENST00000441407 443 ntBASIC21.01■□□□□ 0.95
ZNF546Q86UE3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF546Q86UE3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF546Q86UE3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.01■□□□□ 0.95
ZNF546Q86UE3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF546Q86UE3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF546Q86UE3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21■□□□□ 0.95
ZNF546Q86UE3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF546Q86UE3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
ZNF546Q86UE3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF546Q86UE3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF546Q86UE3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF546Q86UE3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.99■□□□□ 0.95
ZNF546Q86UE3 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.99■□□□□ 0.95
ZNF546Q86UE3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
ZNF546Q86UE3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF546Q86UE3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF546Q86UE3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
ZNF546Q86UE3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF546Q86UE3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF546Q86UE3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF546Q86UE3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.98■□□□□ 0.95
ZNF546Q86UE3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF546Q86UE3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.98■□□□□ 0.95
ZNF546Q86UE3 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF546Q86UE3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.97■□□□□ 0.95
ZNF546Q86UE3 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF546Q86UE3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF546Q86UE3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.96■□□□□ 0.95
ZNF546Q86UE3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
ZNF546Q86UE3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF546Q86UE3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF546Q86UE3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
ZNF546Q86UE3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF546Q86UE3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF546Q86UE3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF546Q86UE3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF546Q86UE3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
ZNF546Q86UE3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF546Q86UE3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF546Q86UE3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF546Q86UE3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF546Q86UE3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ZNF546Q86UE3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF546Q86UE3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF546Q86UE3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF546Q86UE3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
ZNF546Q86UE3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.93■□□□□ 0.94
ZNF546Q86UE3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF546Q86UE3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF546Q86UE3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF546Q86UE3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF546Q86UE3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.92■□□□□ 0.94
ZNF546Q86UE3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF546Q86UE3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ZNF546Q86UE3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF546Q86UE3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.91■□□□□ 0.94
ZNF546Q86UE3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF546Q86UE3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF546Q86UE3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.9■□□□□ 0.94
ZNF546Q86UE3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF546Q86UE3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF546Q86UE3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
ZNF546Q86UE3 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.89■□□□□ 0.94
ZNF546Q86UE3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ZNF546Q86UE3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
ZNF546Q86UE3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.89■□□□□ 0.93
ZNF546Q86UE3 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF546Q86UE3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF546Q86UE3 AP004833.2-201ENST00000532228 1454 ntBASIC20.88■□□□□ 0.93
ZNF546Q86UE3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF546Q86UE3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF546Q86UE3 DYNLL1-208ENST00000550178 581 ntBASIC20.88■□□□□ 0.93
ZNF546Q86UE3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF546Q86UE3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF546Q86UE3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF546Q86UE3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.87■□□□□ 0.93
ZNF546Q86UE3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF546Q86UE3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.87■□□□□ 0.93
ZNF546Q86UE3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF546Q86UE3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF546Q86UE3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.86■□□□□ 0.93
ZNF546Q86UE3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF546Q86UE3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF546Q86UE3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF546Q86UE3 AC010864.1-201ENST00000609407 1511 ntBASIC20.85■□□□□ 0.93
ZNF546Q86UE3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF546Q86UE3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF546Q86UE3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms