Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
FOXR1Q6PIV2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.19■■□□□ 1.78
FOXR1Q6PIV2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
FOXR1Q6PIV2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.18■■□□□ 1.78
FOXR1Q6PIV2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
FOXR1Q6PIV2 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.18■■□□□ 1.78
FOXR1Q6PIV2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC26.18■■□□□ 1.78
FOXR1Q6PIV2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
FOXR1Q6PIV2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
FOXR1Q6PIV2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.16■■□□□ 1.78
FOXR1Q6PIV2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
FOXR1Q6PIV2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
FOXR1Q6PIV2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
FOXR1Q6PIV2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
FOXR1Q6PIV2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
FOXR1Q6PIV2 ZNRF2P2-203ENST00000454624 420 ntBASIC26.15■■□□□ 1.78
FOXR1Q6PIV2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.14■■□□□ 1.78
FOXR1Q6PIV2 WASH5P-204ENST00000632292 975 ntBASIC26.14■■□□□ 1.78
FOXR1Q6PIV2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.14■■□□□ 1.77
FOXR1Q6PIV2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.14■■□□□ 1.77
FOXR1Q6PIV2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
FOXR1Q6PIV2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
FOXR1Q6PIV2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
FOXR1Q6PIV2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
FOXR1Q6PIV2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
FOXR1Q6PIV2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
FOXR1Q6PIV2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
FOXR1Q6PIV2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.12■■□□□ 1.77
FOXR1Q6PIV2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
FOXR1Q6PIV2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
FOXR1Q6PIV2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.11■■□□□ 1.77
FOXR1Q6PIV2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
FOXR1Q6PIV2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
FOXR1Q6PIV2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.11■■□□□ 1.77
FOXR1Q6PIV2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
FOXR1Q6PIV2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
FOXR1Q6PIV2 AC093323.1-202ENST00000635031 2045 ntBASIC26.1■■□□□ 1.77
FOXR1Q6PIV2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
FOXR1Q6PIV2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
FOXR1Q6PIV2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
FOXR1Q6PIV2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
FOXR1Q6PIV2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.08■■□□□ 1.77
FOXR1Q6PIV2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
FOXR1Q6PIV2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.08■■□□□ 1.77
FOXR1Q6PIV2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
FOXR1Q6PIV2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
FOXR1Q6PIV2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
FOXR1Q6PIV2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.06■■□□□ 1.76
FOXR1Q6PIV2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
FOXR1Q6PIV2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
FOXR1Q6PIV2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
FOXR1Q6PIV2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
FOXR1Q6PIV2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
FOXR1Q6PIV2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
FOXR1Q6PIV2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.05■■□□□ 1.76
FOXR1Q6PIV2 AC020928.2-201ENST00000588717 2197 ntBASIC26.05■■□□□ 1.76
FOXR1Q6PIV2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
FOXR1Q6PIV2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
FOXR1Q6PIV2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
FOXR1Q6PIV2 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
FOXR1Q6PIV2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.04■■□□□ 1.76
FOXR1Q6PIV2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
FOXR1Q6PIV2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
FOXR1Q6PIV2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
FOXR1Q6PIV2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
FOXR1Q6PIV2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.03■■□□□ 1.76
FOXR1Q6PIV2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.03■■□□□ 1.76
FOXR1Q6PIV2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
FOXR1Q6PIV2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
FOXR1Q6PIV2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.02■■□□□ 1.76
FOXR1Q6PIV2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
FOXR1Q6PIV2 BX255925.1-201ENST00000566954 1854 ntBASIC26.02■■□□□ 1.76
FOXR1Q6PIV2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
FOXR1Q6PIV2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
FOXR1Q6PIV2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
FOXR1Q6PIV2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
FOXR1Q6PIV2 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
FOXR1Q6PIV2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26■■□□□ 1.75
FOXR1Q6PIV2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26■■□□□ 1.75
FOXR1Q6PIV2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
FOXR1Q6PIV2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
FOXR1Q6PIV2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
FOXR1Q6PIV2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26■■□□□ 1.75
FOXR1Q6PIV2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26■■□□□ 1.75
FOXR1Q6PIV2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26■■□□□ 1.75
FOXR1Q6PIV2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
FOXR1Q6PIV2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
FOXR1Q6PIV2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
FOXR1Q6PIV2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
FOXR1Q6PIV2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.98■■□□□ 1.75
FOXR1Q6PIV2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
FOXR1Q6PIV2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.98■■□□□ 1.75
FOXR1Q6PIV2 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
FOXR1Q6PIV2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.98■■□□□ 1.75
FOXR1Q6PIV2 DUX4L29-201ENST00000425409 679 ntBASIC25.98■■□□□ 1.75
FOXR1Q6PIV2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
FOXR1Q6PIV2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.98■■□□□ 1.75
FOXR1Q6PIV2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.98■■□□□ 1.75
FOXR1Q6PIV2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.97■■□□□ 1.75
FOXR1Q6PIV2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.97■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms