Protein–RNA interactions for Protein: Q4V339

CBWD6, COBW domain-containing protein 6, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6Q4V339 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
CBWD6Q4V339 AP002414.2-202ENST00000590929 1450 ntBASIC27.58■■■□□ 2.01
CBWD6Q4V339 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC27.58■■■□□ 2.01
CBWD6Q4V339 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
CBWD6Q4V339 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
CBWD6Q4V339 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CBWD6Q4V339 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC27.57■■■□□ 2
CBWD6Q4V339 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.57■■■□□ 2
CBWD6Q4V339 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC27.57■■■□□ 2
CBWD6Q4V339 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
CBWD6Q4V339 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.57■■■□□ 2
CBWD6Q4V339 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.57■■■□□ 2
CBWD6Q4V339 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.56■■■□□ 2
CBWD6Q4V339 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.56■■■□□ 2
CBWD6Q4V339 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
CBWD6Q4V339 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CBWD6Q4V339 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.55■■■□□ 2
CBWD6Q4V339 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.55■■■□□ 2
CBWD6Q4V339 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
CBWD6Q4V339 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CBWD6Q4V339 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.53■■■□□ 2
CBWD6Q4V339 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC27.53■■■□□ 2
CBWD6Q4V339 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CBWD6Q4V339 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CBWD6Q4V339 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.53■■■□□ 2
CBWD6Q4V339 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.52■■■□□ 2
CBWD6Q4V339 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
CBWD6Q4V339 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
CBWD6Q4V339 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.51■■□□□ 1.99
CBWD6Q4V339 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.51■■□□□ 1.99
CBWD6Q4V339 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CBWD6Q4V339 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC27.51■■□□□ 1.99
CBWD6Q4V339 BX255925.1-201ENST00000566954 1854 ntBASIC27.5■■□□□ 1.99
CBWD6Q4V339 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
CBWD6Q4V339 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CBWD6Q4V339 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CBWD6Q4V339 LINC01003-201ENST00000564834 1764 ntBASIC27.49■■□□□ 1.99
CBWD6Q4V339 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
CBWD6Q4V339 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
CBWD6Q4V339 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.48■■□□□ 1.99
CBWD6Q4V339 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
CBWD6Q4V339 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CBWD6Q4V339 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CBWD6Q4V339 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
CBWD6Q4V339 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CBWD6Q4V339 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC27.46■■□□□ 1.99
CBWD6Q4V339 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
CBWD6Q4V339 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CBWD6Q4V339 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
CBWD6Q4V339 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.99
CBWD6Q4V339 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
CBWD6Q4V339 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.45■■□□□ 1.98
CBWD6Q4V339 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
CBWD6Q4V339 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
CBWD6Q4V339 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CBWD6Q4V339 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.44■■□□□ 1.98
CBWD6Q4V339 AC110285.7-201ENST00000624417 1536 ntBASIC27.43■■□□□ 1.98
CBWD6Q4V339 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.43■■□□□ 1.98
CBWD6Q4V339 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CBWD6Q4V339 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
CBWD6Q4V339 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
CBWD6Q4V339 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CBWD6Q4V339 LINC01971-201ENST00000617888 1048 ntBASIC27.41■■□□□ 1.98
CBWD6Q4V339 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.4■■□□□ 1.98
CBWD6Q4V339 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CBWD6Q4V339 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CBWD6Q4V339 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.39■■□□□ 1.98
CBWD6Q4V339 AC018358.1-201ENST00000631079 1402 ntBASIC27.39■■□□□ 1.97
CBWD6Q4V339 ZNRF2P2-203ENST00000454624 420 ntBASIC27.38■■□□□ 1.97
CBWD6Q4V339 PEX7-203ENST00000541292 945 ntTSL 5 BASIC27.38■■□□□ 1.97
CBWD6Q4V339 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CBWD6Q4V339 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
CBWD6Q4V339 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
CBWD6Q4V339 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
CBWD6Q4V339 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
CBWD6Q4V339 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
CBWD6Q4V339 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CBWD6Q4V339 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CBWD6Q4V339 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.36■■□□□ 1.97
CBWD6Q4V339 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
CBWD6Q4V339 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CBWD6Q4V339 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.35■■□□□ 1.97
CBWD6Q4V339 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
CBWD6Q4V339 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
CBWD6Q4V339 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
CBWD6Q4V339 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CBWD6Q4V339 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
CBWD6Q4V339 ABHD17AP4-201ENST00000411545 909 ntBASIC27.34■■□□□ 1.97
CBWD6Q4V339 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.34■■□□□ 1.97
CBWD6Q4V339 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC27.31■■□□□ 1.96
CBWD6Q4V339 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
CBWD6Q4V339 SHF-208ENST00000560734 1731 ntTSL 3 BASIC27.31■■□□□ 1.96
CBWD6Q4V339 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CBWD6Q4V339 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC27.31■■□□□ 1.96
CBWD6Q4V339 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CBWD6Q4V339 DUX4L11-201ENST00000611504 1267 ntBASIC27.31■■□□□ 1.96
CBWD6Q4V339 DUX4L12-201ENST00000614593 1267 ntBASIC27.31■■□□□ 1.96
CBWD6Q4V339 DUX4L14-201ENST00000621227 1267 ntBASIC27.31■■□□□ 1.96
CBWD6Q4V339 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CBWD6Q4V339 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC27.3■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms