Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TBC1D28Q2M2D7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TBC1D28Q2M2D7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
TBC1D28Q2M2D7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TBC1D28Q2M2D7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TBC1D28Q2M2D7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TBC1D28Q2M2D7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.1■■□□□ 1.13
TBC1D28Q2M2D7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
TBC1D28Q2M2D7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TBC1D28Q2M2D7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TBC1D28Q2M2D7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.09■■□□□ 1.13
TBC1D28Q2M2D7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
TBC1D28Q2M2D7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TBC1D28Q2M2D7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TBC1D28Q2M2D7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
TBC1D28Q2M2D7 AC110285.7-201ENST00000624417 1536 ntBASIC22.08■■□□□ 1.13
TBC1D28Q2M2D7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TBC1D28Q2M2D7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
TBC1D28Q2M2D7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
TBC1D28Q2M2D7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.12
TBC1D28Q2M2D7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.08■■□□□ 1.12
TBC1D28Q2M2D7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TBC1D28Q2M2D7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TBC1D28Q2M2D7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TBC1D28Q2M2D7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
TBC1D28Q2M2D7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.06■■□□□ 1.12
TBC1D28Q2M2D7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC22.06■■□□□ 1.12
TBC1D28Q2M2D7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TBC1D28Q2M2D7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.05■■□□□ 1.12
TBC1D28Q2M2D7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.05■■□□□ 1.12
TBC1D28Q2M2D7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TBC1D28Q2M2D7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TBC1D28Q2M2D7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TBC1D28Q2M2D7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.04■■□□□ 1.12
TBC1D28Q2M2D7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
TBC1D28Q2M2D7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.04■■□□□ 1.12
TBC1D28Q2M2D7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TBC1D28Q2M2D7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.04■■□□□ 1.12
TBC1D28Q2M2D7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
TBC1D28Q2M2D7 DRD5P2-201ENST00000421395 2012 ntBASIC22.04■■□□□ 1.12
TBC1D28Q2M2D7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TBC1D28Q2M2D7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
TBC1D28Q2M2D7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TBC1D28Q2M2D7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TBC1D28Q2M2D7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TBC1D28Q2M2D7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TBC1D28Q2M2D7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TBC1D28Q2M2D7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TBC1D28Q2M2D7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TBC1D28Q2M2D7 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.02■■□□□ 1.12
TBC1D28Q2M2D7 MIR3648-2-201ENST00000581792 180 ntBASIC22.02■■□□□ 1.12
TBC1D28Q2M2D7 MIR3648-1-201ENST00000615959 180 ntBASIC22.02■■□□□ 1.12
TBC1D28Q2M2D7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.02■■□□□ 1.12
TBC1D28Q2M2D7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TBC1D28Q2M2D7 AP002414.2-202ENST00000590929 1450 ntBASIC22.02■■□□□ 1.12
TBC1D28Q2M2D7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC22.01■■□□□ 1.11
TBC1D28Q2M2D7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.01■■□□□ 1.11
TBC1D28Q2M2D7 CR559946.2-201ENST00000623684 991 ntBASIC22.01■■□□□ 1.11
TBC1D28Q2M2D7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.01■■□□□ 1.11
TBC1D28Q2M2D7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TBC1D28Q2M2D7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
TBC1D28Q2M2D7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
TBC1D28Q2M2D7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TBC1D28Q2M2D7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
TBC1D28Q2M2D7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TBC1D28Q2M2D7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TBC1D28Q2M2D7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
TBC1D28Q2M2D7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
TBC1D28Q2M2D7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TBC1D28Q2M2D7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TBC1D28Q2M2D7 AC016575.1-201ENST00000607026 382 ntBASIC21.97■■□□□ 1.11
TBC1D28Q2M2D7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TBC1D28Q2M2D7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TBC1D28Q2M2D7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TBC1D28Q2M2D7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TBC1D28Q2M2D7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TBC1D28Q2M2D7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TBC1D28Q2M2D7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TBC1D28Q2M2D7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TBC1D28Q2M2D7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TBC1D28Q2M2D7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
TBC1D28Q2M2D7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.95■■□□□ 1.1
TBC1D28Q2M2D7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TBC1D28Q2M2D7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TBC1D28Q2M2D7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TBC1D28Q2M2D7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.94■■□□□ 1.1
TBC1D28Q2M2D7 AC008813.1-201ENST00000536597 885 ntBASIC21.94■■□□□ 1.1
TBC1D28Q2M2D7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
TBC1D28Q2M2D7 AC142086.6-201ENST00000621154 1765 ntBASIC21.94■■□□□ 1.1
TBC1D28Q2M2D7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TBC1D28Q2M2D7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TBC1D28Q2M2D7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.93■■□□□ 1.1
TBC1D28Q2M2D7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
TBC1D28Q2M2D7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TBC1D28Q2M2D7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.93■■□□□ 1.1
TBC1D28Q2M2D7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TBC1D28Q2M2D7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TBC1D28Q2M2D7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.92■■□□□ 1.1
TBC1D28Q2M2D7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TBC1D28Q2M2D7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms