Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 U85056.1-201ENST00000616429 682 ntBASIC33.07■■■□□ 2.88
PTCD1O75127 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
PTCD1O75127 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC33.06■■■□□ 2.88
PTCD1O75127 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
PTCD1O75127 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC33.05■■■□□ 2.88
PTCD1O75127 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC33.05■■■□□ 2.88
PTCD1O75127 HYI-213ENST00000583037 1322 ntTSL 5 BASIC33.04■■■□□ 2.88
PTCD1O75127 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
PTCD1O75127 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC33.04■■■□□ 2.88
PTCD1O75127 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
PTCD1O75127 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
PTCD1O75127 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
PTCD1O75127 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
PTCD1O75127 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
PTCD1O75127 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
PTCD1O75127 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC33.02■■■□□ 2.88
PTCD1O75127 AL033527.3-201ENST00000566366 1196 ntBASIC33.02■■■□□ 2.88
PTCD1O75127 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
PTCD1O75127 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC33.01■■■□□ 2.88
PTCD1O75127 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
PTCD1O75127 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC33.01■■■□□ 2.87
PTCD1O75127 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC33.01■■■□□ 2.87
PTCD1O75127 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
PTCD1O75127 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
PTCD1O75127 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
PTCD1O75127 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
PTCD1O75127 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC33■■■□□ 2.87
PTCD1O75127 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
PTCD1O75127 AC018358.1-201ENST00000631079 1402 ntBASIC32.99■■■□□ 2.87
PTCD1O75127 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC32.99■■■□□ 2.87
PTCD1O75127 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC32.99■■■□□ 2.87
PTCD1O75127 MEST-211ENST00000437945 1455 ntTSL 5 BASIC32.99■■■□□ 2.87
PTCD1O75127 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC32.98■■■□□ 2.87
PTCD1O75127 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC32.98■■■□□ 2.87
PTCD1O75127 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC32.98■■■□□ 2.87
PTCD1O75127 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC32.98■■■□□ 2.87
PTCD1O75127 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
PTCD1O75127 AC092296.2-201ENST00000589470 999 ntBASIC32.96■■■□□ 2.87
PTCD1O75127 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
PTCD1O75127 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC32.95■■■□□ 2.87
PTCD1O75127 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC32.95■■■□□ 2.87
PTCD1O75127 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
PTCD1O75127 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
PTCD1O75127 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC32.95■■■□□ 2.86
PTCD1O75127 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC32.95■■■□□ 2.86
PTCD1O75127 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC32.94■■■□□ 2.86
PTCD1O75127 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
PTCD1O75127 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC32.93■■■□□ 2.86
PTCD1O75127 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
PTCD1O75127 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
PTCD1O75127 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
PTCD1O75127 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
PTCD1O75127 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC32.91■■■□□ 2.86
PTCD1O75127 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC32.91■■■□□ 2.86
PTCD1O75127 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC32.91■■■□□ 2.86
PTCD1O75127 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
PTCD1O75127 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC32.91■■■□□ 2.86
PTCD1O75127 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC32.9■■■□□ 2.86
PTCD1O75127 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
PTCD1O75127 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
PTCD1O75127 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC32.9■■■□□ 2.86
PTCD1O75127 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC32.89■■■□□ 2.86
PTCD1O75127 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
PTCD1O75127 MED25-210ENST00000612854 801 ntTSL 5 BASIC32.89■■■□□ 2.86
PTCD1O75127 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
PTCD1O75127 MED25-214ENST00000622402 642 ntTSL 5 BASIC32.89■■■□□ 2.86
PTCD1O75127 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
PTCD1O75127 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
PTCD1O75127 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC32.87■■■□□ 2.85
PTCD1O75127 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
PTCD1O75127 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC32.86■■■□□ 2.85
PTCD1O75127 KRT18P60-201ENST00000312876 1297 ntBASIC32.86■■■□□ 2.85
PTCD1O75127 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
PTCD1O75127 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC32.85■■■□□ 2.85
PTCD1O75127 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
PTCD1O75127 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
PTCD1O75127 ECEL1P2-201ENST00000461596 1295 ntBASIC32.84■■■□□ 2.85
PTCD1O75127 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC32.83■■■□□ 2.85
PTCD1O75127 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC32.83■■■□□ 2.85
PTCD1O75127 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC32.83■■■□□ 2.85
PTCD1O75127 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
PTCD1O75127 GFER-205ENST00000569451 517 ntTSL 5 BASIC32.81■■■□□ 2.84
PTCD1O75127 ST7-AS1-201ENST00000456775 1889 ntBASIC32.8■■■□□ 2.84
PTCD1O75127 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC32.8■■■□□ 2.84
PTCD1O75127 MOB2-207ENST00000614710 705 ntTSL 5 BASIC32.8■■■□□ 2.84
PTCD1O75127 AC004987.1-201ENST00000428627 508 ntBASIC32.79■■■□□ 2.84
PTCD1O75127 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC32.79■■■□□ 2.84
PTCD1O75127 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC32.79■■■□□ 2.84
PTCD1O75127 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
PTCD1O75127 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC32.78■■■□□ 2.84
PTCD1O75127 TSPY13P-201ENST00000338964 914 ntBASIC32.78■■■□□ 2.84
PTCD1O75127 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC32.78■■■□□ 2.84
PTCD1O75127 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
PTCD1O75127 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC32.78■■■□□ 2.84
PTCD1O75127 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC32.77■■■□□ 2.84
PTCD1O75127 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC32.77■■■□□ 2.84
PTCD1O75127 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
PTCD1O75127 ATP5G2P3-201ENST00000429083 425 ntBASIC32.76■■■□□ 2.83
PTCD1O75127 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
PTCD1O75127 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms