Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
PRAMEF11O60813 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26■■□□□ 1.75
PRAMEF11O60813 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PRAMEF11O60813 AC110285.7-201ENST00000624417 1536 ntBASIC25.99■■□□□ 1.75
PRAMEF11O60813 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PRAMEF11O60813 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PRAMEF11O60813 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.99■■□□□ 1.75
PRAMEF11O60813 CR559946.2-201ENST00000623684 991 ntBASIC25.99■■□□□ 1.75
PRAMEF11O60813 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PRAMEF11O60813 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PRAMEF11O60813 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.98■■□□□ 1.75
PRAMEF11O60813 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PRAMEF11O60813 DRD5P2-201ENST00000421395 2012 ntBASIC25.97■■□□□ 1.75
PRAMEF11O60813 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PRAMEF11O60813 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
PRAMEF11O60813 MIR3648-2-201ENST00000581792 180 ntBASIC25.97■■□□□ 1.75
PRAMEF11O60813 MIR3648-1-201ENST00000615959 180 ntBASIC25.97■■□□□ 1.75
PRAMEF11O60813 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PRAMEF11O60813 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.96■■□□□ 1.75
PRAMEF11O60813 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.95■■□□□ 1.74
PRAMEF11O60813 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
PRAMEF11O60813 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
PRAMEF11O60813 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
PRAMEF11O60813 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PRAMEF11O60813 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PRAMEF11O60813 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.93■■□□□ 1.74
PRAMEF11O60813 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PRAMEF11O60813 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PRAMEF11O60813 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.93■■□□□ 1.74
PRAMEF11O60813 AP002414.2-202ENST00000590929 1450 ntBASIC25.92■■□□□ 1.74
PRAMEF11O60813 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
PRAMEF11O60813 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
PRAMEF11O60813 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.92■■□□□ 1.74
PRAMEF11O60813 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PRAMEF11O60813 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PRAMEF11O60813 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.91■■□□□ 1.74
PRAMEF11O60813 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
PRAMEF11O60813 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PRAMEF11O60813 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
PRAMEF11O60813 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
PRAMEF11O60813 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
PRAMEF11O60813 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PRAMEF11O60813 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.9■■□□□ 1.74
PRAMEF11O60813 AC016575.1-201ENST00000607026 382 ntBASIC25.9■■□□□ 1.74
PRAMEF11O60813 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
PRAMEF11O60813 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.9■■□□□ 1.74
PRAMEF11O60813 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
PRAMEF11O60813 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PRAMEF11O60813 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.73
PRAMEF11O60813 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.88■■□□□ 1.73
PRAMEF11O60813 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
PRAMEF11O60813 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.88■■□□□ 1.73
PRAMEF11O60813 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
PRAMEF11O60813 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PRAMEF11O60813 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PRAMEF11O60813 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PRAMEF11O60813 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PRAMEF11O60813 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PRAMEF11O60813 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PRAMEF11O60813 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PRAMEF11O60813 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.86■■□□□ 1.73
PRAMEF11O60813 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PRAMEF11O60813 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PRAMEF11O60813 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PRAMEF11O60813 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PRAMEF11O60813 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PRAMEF11O60813 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PRAMEF11O60813 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.84■■□□□ 1.73
PRAMEF11O60813 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PRAMEF11O60813 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.82■■□□□ 1.72
PRAMEF11O60813 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
PRAMEF11O60813 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
PRAMEF11O60813 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.82■■□□□ 1.72
PRAMEF11O60813 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PRAMEF11O60813 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
PRAMEF11O60813 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.81■■□□□ 1.72
PRAMEF11O60813 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
PRAMEF11O60813 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.81■■□□□ 1.72
PRAMEF11O60813 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
PRAMEF11O60813 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PRAMEF11O60813 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
PRAMEF11O60813 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PRAMEF11O60813 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
PRAMEF11O60813 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
PRAMEF11O60813 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PRAMEF11O60813 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
PRAMEF11O60813 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PRAMEF11O60813 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.79■■□□□ 1.72
PRAMEF11O60813 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PRAMEF11O60813 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
PRAMEF11O60813 AC142086.6-201ENST00000621154 1765 ntBASIC25.79■■□□□ 1.72
PRAMEF11O60813 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PRAMEF11O60813 MIR639-201ENST00000384974 98 ntBASIC25.78■■□□□ 1.72
PRAMEF11O60813 AC008813.1-201ENST00000536597 885 ntBASIC25.78■■□□□ 1.72
PRAMEF11O60813 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PRAMEF11O60813 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PRAMEF11O60813 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PRAMEF11O60813 HLA-V-202ENST00000446817 847 ntBASIC25.76■■□□□ 1.71
PRAMEF11O60813 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.76■■□□□ 1.71
PRAMEF11O60813 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms