Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
PRAMEF11O60813 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26■■□□□ 1.75
PRAMEF11O60813 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PRAMEF11O60813 AC110285.7-201ENST00000624417 1536 ntBASIC25.99■■□□□ 1.75
PRAMEF11O60813 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PRAMEF11O60813 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PRAMEF11O60813 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.99■■□□□ 1.75
PRAMEF11O60813 CR559946.2-201ENST00000623684 991 ntBASIC25.99■■□□□ 1.75
PRAMEF11O60813 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PRAMEF11O60813 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PRAMEF11O60813 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.98■■□□□ 1.75
PRAMEF11O60813 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PRAMEF11O60813 DRD5P2-201ENST00000421395 2012 ntBASIC25.97■■□□□ 1.75
PRAMEF11O60813 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PRAMEF11O60813 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
PRAMEF11O60813 MIR3648-2-201ENST00000581792 180 ntBASIC25.97■■□□□ 1.75
PRAMEF11O60813 MIR3648-1-201ENST00000615959 180 ntBASIC25.97■■□□□ 1.75
PRAMEF11O60813 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PRAMEF11O60813 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.96■■□□□ 1.75
PRAMEF11O60813 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.95■■□□□ 1.74
PRAMEF11O60813 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
PRAMEF11O60813 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
PRAMEF11O60813 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
PRAMEF11O60813 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PRAMEF11O60813 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PRAMEF11O60813 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.93■■□□□ 1.74
PRAMEF11O60813 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PRAMEF11O60813 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PRAMEF11O60813 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.93■■□□□ 1.74
PRAMEF11O60813 AP002414.2-202ENST00000590929 1450 ntBASIC25.92■■□□□ 1.74
PRAMEF11O60813 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
PRAMEF11O60813 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
PRAMEF11O60813 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.92■■□□□ 1.74
PRAMEF11O60813 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PRAMEF11O60813 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PRAMEF11O60813 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.91■■□□□ 1.74
PRAMEF11O60813 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
PRAMEF11O60813 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PRAMEF11O60813 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
PRAMEF11O60813 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
PRAMEF11O60813 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
PRAMEF11O60813 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PRAMEF11O60813 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.9■■□□□ 1.74
PRAMEF11O60813 AC016575.1-201ENST00000607026 382 ntBASIC25.9■■□□□ 1.74
PRAMEF11O60813 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
PRAMEF11O60813 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.9■■□□□ 1.74
PRAMEF11O60813 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
PRAMEF11O60813 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PRAMEF11O60813 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.73
PRAMEF11O60813 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.88■■□□□ 1.73
PRAMEF11O60813 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
PRAMEF11O60813 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.88■■□□□ 1.73
PRAMEF11O60813 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
PRAMEF11O60813 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PRAMEF11O60813 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PRAMEF11O60813 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PRAMEF11O60813 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PRAMEF11O60813 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PRAMEF11O60813 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PRAMEF11O60813 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PRAMEF11O60813 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.86■■□□□ 1.73
PRAMEF11O60813 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PRAMEF11O60813 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PRAMEF11O60813 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PRAMEF11O60813 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PRAMEF11O60813 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PRAMEF11O60813 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PRAMEF11O60813 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.84■■□□□ 1.73
PRAMEF11O60813 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PRAMEF11O60813 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.82■■□□□ 1.72
PRAMEF11O60813 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
PRAMEF11O60813 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
PRAMEF11O60813 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.82■■□□□ 1.72
PRAMEF11O60813 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PRAMEF11O60813 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
PRAMEF11O60813 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.81■■□□□ 1.72
PRAMEF11O60813 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
PRAMEF11O60813 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.81■■□□□ 1.72
PRAMEF11O60813 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
PRAMEF11O60813 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PRAMEF11O60813 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
PRAMEF11O60813 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PRAMEF11O60813 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
PRAMEF11O60813 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
PRAMEF11O60813 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PRAMEF11O60813 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
PRAMEF11O60813 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PRAMEF11O60813 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.79■■□□□ 1.72
PRAMEF11O60813 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PRAMEF11O60813 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
PRAMEF11O60813 AC142086.6-201ENST00000621154 1765 ntBASIC25.79■■□□□ 1.72
PRAMEF11O60813 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PRAMEF11O60813 MIR639-201ENST00000384974 98 ntBASIC25.78■■□□□ 1.72
PRAMEF11O60813 AC008813.1-201ENST00000536597 885 ntBASIC25.78■■□□□ 1.72
PRAMEF11O60813 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PRAMEF11O60813 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PRAMEF11O60813 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PRAMEF11O60813 HLA-V-202ENST00000446817 847 ntBASIC25.76■■□□□ 1.71
PRAMEF11O60813 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.76■■□□□ 1.71
PRAMEF11O60813 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms