Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFA1O15239 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFA1O15239 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFA1O15239 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFA1O15239 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFA1O15239 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NDUFA1O15239 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC17.23■□□□□ 0.35
NDUFA1O15239 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFA1O15239 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFA1O15239 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFA1O15239 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC17.22■□□□□ 0.35
NDUFA1O15239 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC17.22■□□□□ 0.35
NDUFA1O15239 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NDUFA1O15239 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFA1O15239 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.22■□□□□ 0.35
NDUFA1O15239 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFA1O15239 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFA1O15239 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFA1O15239 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFA1O15239 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFA1O15239 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFA1O15239 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC17.21■□□□□ 0.35
NDUFA1O15239 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFA1O15239 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFA1O15239 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NDUFA1O15239 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA1O15239 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA1O15239 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA1O15239 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
NDUFA1O15239 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA1O15239 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA1O15239 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA1O15239 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NDUFA1O15239 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA1O15239 AC091060.1-201ENST00000623524 1766 ntBASIC17.19■□□□□ 0.34
NDUFA1O15239 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA1O15239 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA1O15239 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC17.19■□□□□ 0.34
NDUFA1O15239 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFA1O15239 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFA1O15239 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFA1O15239 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFA1O15239 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
NDUFA1O15239 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
NDUFA1O15239 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.17■□□□□ 0.34
NDUFA1O15239 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA1O15239 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA1O15239 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA1O15239 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.16■□□□□ 0.34
NDUFA1O15239 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
NDUFA1O15239 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA1O15239 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
NDUFA1O15239 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
NDUFA1O15239 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA1O15239 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.15■□□□□ 0.34
NDUFA1O15239 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.15■□□□□ 0.34
NDUFA1O15239 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA1O15239 EBPL-202ENST00000378268 680 ntTSL 3 BASIC17.15■□□□□ 0.34
NDUFA1O15239 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC17.15■□□□□ 0.34
NDUFA1O15239 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA1O15239 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA1O15239 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
NDUFA1O15239 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
NDUFA1O15239 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA1O15239 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC17.14■□□□□ 0.33
NDUFA1O15239 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
NDUFA1O15239 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA1O15239 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
NDUFA1O15239 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA1O15239 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA1O15239 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NDUFA1O15239 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC17.13■□□□□ 0.33
NDUFA1O15239 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFA1O15239 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFA1O15239 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFA1O15239 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA1O15239 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC17.12■□□□□ 0.33
NDUFA1O15239 DENR-202ENST00000455982 1052 ntTSL 5 BASIC17.12■□□□□ 0.33
NDUFA1O15239 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.12■□□□□ 0.33
NDUFA1O15239 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.11■□□□□ 0.33
NDUFA1O15239 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC17.11■□□□□ 0.33
NDUFA1O15239 AL391121.1-201ENST00000607967 1349 ntBASIC17.11■□□□□ 0.33
NDUFA1O15239 AC145676.1-201ENST00000514988 2004 ntBASIC17.11■□□□□ 0.33
NDUFA1O15239 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFA1O15239 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFA1O15239 AC020928.2-201ENST00000588717 2197 ntBASIC17.1■□□□□ 0.33
NDUFA1O15239 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFA1O15239 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFA1O15239 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NDUFA1O15239 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFA1O15239 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.09■□□□□ 0.33
NDUFA1O15239 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFA1O15239 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFA1O15239 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFA1O15239 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
NDUFA1O15239 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFA1O15239 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC17.08■□□□□ 0.33
NDUFA1O15239 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFA1O15239 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFA1O15239 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms