Protein–RNA interactions for Protein: A0A0K0K1B3

TRBV30, T-cell receptor beta variable 30 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV30A0A0K0K1B3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV30A0A0K0K1B3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC17.11■□□□□ 0.33
TRBV30A0A0K0K1B3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV30A0A0K0K1B3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV30A0A0K0K1B3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRBV30A0A0K0K1B3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRBV30A0A0K0K1B3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TRBV30A0A0K0K1B3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
TRBV30A0A0K0K1B3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV30A0A0K0K1B3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
TRBV30A0A0K0K1B3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV30A0A0K0K1B3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
TRBV30A0A0K0K1B3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV30A0A0K0K1B3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.09■□□□□ 0.33
TRBV30A0A0K0K1B3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV30A0A0K0K1B3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.08■□□□□ 0.33
TRBV30A0A0K0K1B3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV30A0A0K0K1B3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV30A0A0K0K1B3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV30A0A0K0K1B3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV30A0A0K0K1B3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV30A0A0K0K1B3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRBV30A0A0K0K1B3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV30A0A0K0K1B3 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC17.07■□□□□ 0.32
TRBV30A0A0K0K1B3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV30A0A0K0K1B3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV30A0A0K0K1B3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV30A0A0K0K1B3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV30A0A0K0K1B3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRBV30A0A0K0K1B3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBV30A0A0K0K1B3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV30A0A0K0K1B3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV30A0A0K0K1B3 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV30A0A0K0K1B3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRBV30A0A0K0K1B3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
TRBV30A0A0K0K1B3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV30A0A0K0K1B3 AC020928.2-201ENST00000588717 2197 ntBASIC17.05■□□□□ 0.32
TRBV30A0A0K0K1B3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV30A0A0K0K1B3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV30A0A0K0K1B3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV30A0A0K0K1B3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV30A0A0K0K1B3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TRBV30A0A0K0K1B3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC17.04■□□□□ 0.32
TRBV30A0A0K0K1B3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV30A0A0K0K1B3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRBV30A0A0K0K1B3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV30A0A0K0K1B3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV30A0A0K0K1B3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV30A0A0K0K1B3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV30A0A0K0K1B3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV30A0A0K0K1B3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV30A0A0K0K1B3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.02■□□□□ 0.32
TRBV30A0A0K0K1B3 AP004833.2-201ENST00000532228 1454 ntBASIC17.02■□□□□ 0.32
TRBV30A0A0K0K1B3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.02■□□□□ 0.32
TRBV30A0A0K0K1B3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV30A0A0K0K1B3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV30A0A0K0K1B3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV30A0A0K0K1B3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV30A0A0K0K1B3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV30A0A0K0K1B3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC17.01■□□□□ 0.31
TRBV30A0A0K0K1B3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV30A0A0K0K1B3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV30A0A0K0K1B3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC17.01■□□□□ 0.31
TRBV30A0A0K0K1B3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV30A0A0K0K1B3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV30A0A0K0K1B3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC17.01■□□□□ 0.31
TRBV30A0A0K0K1B3 AC091060.1-201ENST00000623524 1766 ntBASIC17■□□□□ 0.31
TRBV30A0A0K0K1B3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV30A0A0K0K1B3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV30A0A0K0K1B3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17■□□□□ 0.31
TRBV30A0A0K0K1B3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17■□□□□ 0.31
TRBV30A0A0K0K1B3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV30A0A0K0K1B3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TRBV30A0A0K0K1B3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV30A0A0K0K1B3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV30A0A0K0K1B3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV30A0A0K0K1B3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TRBV30A0A0K0K1B3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TRBV30A0A0K0K1B3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV30A0A0K0K1B3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV30A0A0K0K1B3 AL391121.1-201ENST00000607967 1349 ntBASIC16.98■□□□□ 0.31
TRBV30A0A0K0K1B3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV30A0A0K0K1B3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC16.98■□□□□ 0.31
TRBV30A0A0K0K1B3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC16.98■□□□□ 0.31
TRBV30A0A0K0K1B3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
TRBV30A0A0K0K1B3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC16.98■□□□□ 0.31
TRBV30A0A0K0K1B3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV30A0A0K0K1B3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC16.97■□□□□ 0.31
TRBV30A0A0K0K1B3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV30A0A0K0K1B3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC16.97■□□□□ 0.31
TRBV30A0A0K0K1B3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV30A0A0K0K1B3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV30A0A0K0K1B3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV30A0A0K0K1B3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV30A0A0K0K1B3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV30A0A0K0K1B3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
TRBV30A0A0K0K1B3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
TRBV30A0A0K0K1B3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV30A0A0K0K1B3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV30A0A0K0K1B3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms