Protein–RNA interactions for Protein: A0A075B6U4

TRAV7, T-cell receptor alpha variable 7 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV7A0A075B6U4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV7A0A075B6U4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV7A0A075B6U4 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
TRAV7A0A075B6U4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV7A0A075B6U4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV7A0A075B6U4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRAV7A0A075B6U4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV7A0A075B6U4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV7A0A075B6U4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV7A0A075B6U4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV7A0A075B6U4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TRAV7A0A075B6U4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV7A0A075B6U4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV7A0A075B6U4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV7A0A075B6U4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV7A0A075B6U4 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV7A0A075B6U4 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV7A0A075B6U4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV7A0A075B6U4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRAV7A0A075B6U4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV7A0A075B6U4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRAV7A0A075B6U4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRAV7A0A075B6U4 AC091060.1-201ENST00000623524 1766 ntBASIC15.17■□□□□ 0.02
TRAV7A0A075B6U4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV7A0A075B6U4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV7A0A075B6U4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV7A0A075B6U4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV7A0A075B6U4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC15.16■□□□□ 0.02
TRAV7A0A075B6U4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV7A0A075B6U4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV7A0A075B6U4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV7A0A075B6U4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV7A0A075B6U4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV7A0A075B6U4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV7A0A075B6U4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV7A0A075B6U4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TRAV7A0A075B6U4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV7A0A075B6U4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV7A0A075B6U4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
TRAV7A0A075B6U4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRAV7A0A075B6U4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV7A0A075B6U4 BX255925.1-201ENST00000566954 1854 ntBASIC15.14■□□□□ 0.01
TRAV7A0A075B6U4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV7A0A075B6U4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRAV7A0A075B6U4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV7A0A075B6U4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
TRAV7A0A075B6U4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV7A0A075B6U4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV7A0A075B6U4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV7A0A075B6U4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV7A0A075B6U4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV7A0A075B6U4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV7A0A075B6U4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV7A0A075B6U4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV7A0A075B6U4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV7A0A075B6U4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV7A0A075B6U4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
TRAV7A0A075B6U4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV7A0A075B6U4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV7A0A075B6U4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV7A0A075B6U4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV7A0A075B6U4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV7A0A075B6U4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TRAV7A0A075B6U4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV7A0A075B6U4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV7A0A075B6U4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV7A0A075B6U4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV7A0A075B6U4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV7A0A075B6U4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV7A0A075B6U4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV7A0A075B6U4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAV7A0A075B6U4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV7A0A075B6U4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
TRAV7A0A075B6U4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV7A0A075B6U4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV7A0A075B6U4 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV7A0A075B6U4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV7A0A075B6U4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV7A0A075B6U4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV7A0A075B6U4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV7A0A075B6U4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV7A0A075B6U4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV7A0A075B6U4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV7A0A075B6U4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAV7A0A075B6U4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV7A0A075B6U4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV7A0A075B6U4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV7A0A075B6U4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRAV7A0A075B6U4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRAV7A0A075B6U4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV7A0A075B6U4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV7A0A075B6U4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV7A0A075B6U4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV7A0A075B6U4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV7A0A075B6U4 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV7A0A075B6U4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV7A0A075B6U4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV7A0A075B6U4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV7A0A075B6U4 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV7A0A075B6U4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms