Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CSNK1G3Q9Y6M4 AL135925.1-201ENST00000605920 1701 ntBASIC25.28■■□□□ 1.64
CSNK1G3Q9Y6M4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CSNK1G3Q9Y6M4 AC135983.2-203ENST00000454486 1613 ntBASIC25.27■■□□□ 1.64
CSNK1G3Q9Y6M4 AC008813.1-201ENST00000536597 885 ntBASIC25.27■■□□□ 1.64
CSNK1G3Q9Y6M4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.26■■□□□ 1.63
CSNK1G3Q9Y6M4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.25■■□□□ 1.63
CSNK1G3Q9Y6M4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.25■■□□□ 1.63
CSNK1G3Q9Y6M4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.25■■□□□ 1.63
CSNK1G3Q9Y6M4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
CSNK1G3Q9Y6M4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.24■■□□□ 1.63
CSNK1G3Q9Y6M4 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.24■■□□□ 1.63
CSNK1G3Q9Y6M4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CSNK1G3Q9Y6M4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CSNK1G3Q9Y6M4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CSNK1G3Q9Y6M4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
CSNK1G3Q9Y6M4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
CSNK1G3Q9Y6M4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CSNK1G3Q9Y6M4 WHAMMP2-203ENST00000563942 1603 ntBASIC25.22■■□□□ 1.63
CSNK1G3Q9Y6M4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CSNK1G3Q9Y6M4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.21■■□□□ 1.63
CSNK1G3Q9Y6M4 GPX1-201ENST00000419349 1106 ntBASIC25.21■■□□□ 1.63
CSNK1G3Q9Y6M4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CSNK1G3Q9Y6M4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.63
CSNK1G3Q9Y6M4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CSNK1G3Q9Y6M4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CSNK1G3Q9Y6M4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
CSNK1G3Q9Y6M4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.2■■□□□ 1.62
CSNK1G3Q9Y6M4 RARRES2P2-201ENST00000394842 485 ntBASIC25.19■■□□□ 1.62
CSNK1G3Q9Y6M4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.19■■□□□ 1.62
CSNK1G3Q9Y6M4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.19■■□□□ 1.62
CSNK1G3Q9Y6M4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CSNK1G3Q9Y6M4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CSNK1G3Q9Y6M4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.18■■□□□ 1.62
CSNK1G3Q9Y6M4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
CSNK1G3Q9Y6M4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CSNK1G3Q9Y6M4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
CSNK1G3Q9Y6M4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CSNK1G3Q9Y6M4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
CSNK1G3Q9Y6M4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CSNK1G3Q9Y6M4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
CSNK1G3Q9Y6M4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.17■■□□□ 1.62
CSNK1G3Q9Y6M4 RNF126P1-201ENST00000567452 1320 ntBASIC25.16■■□□□ 1.62
CSNK1G3Q9Y6M4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CSNK1G3Q9Y6M4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CSNK1G3Q9Y6M4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CSNK1G3Q9Y6M4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CSNK1G3Q9Y6M4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CSNK1G3Q9Y6M4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
CSNK1G3Q9Y6M4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CSNK1G3Q9Y6M4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
CSNK1G3Q9Y6M4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
CSNK1G3Q9Y6M4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.12■■□□□ 1.61
CSNK1G3Q9Y6M4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.12■■□□□ 1.61
CSNK1G3Q9Y6M4 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CSNK1G3Q9Y6M4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CSNK1G3Q9Y6M4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.11■■□□□ 1.61
CSNK1G3Q9Y6M4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.11■■□□□ 1.61
CSNK1G3Q9Y6M4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CSNK1G3Q9Y6M4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.1■■□□□ 1.61
CSNK1G3Q9Y6M4 AC110285.7-201ENST00000624417 1536 ntBASIC25.1■■□□□ 1.61
CSNK1G3Q9Y6M4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.09■■□□□ 1.61
CSNK1G3Q9Y6M4 ABHD17AP5-201ENST00000580133 923 ntBASIC25.09■■□□□ 1.61
CSNK1G3Q9Y6M4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.09■■□□□ 1.61
CSNK1G3Q9Y6M4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
CSNK1G3Q9Y6M4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CSNK1G3Q9Y6M4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CSNK1G3Q9Y6M4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CSNK1G3Q9Y6M4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.08■■□□□ 1.61
CSNK1G3Q9Y6M4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.08■■□□□ 1.61
CSNK1G3Q9Y6M4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.08■■□□□ 1.61
CSNK1G3Q9Y6M4 AC022413.1-201ENST00000624602 984 ntBASIC25.08■■□□□ 1.61
CSNK1G3Q9Y6M4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
CSNK1G3Q9Y6M4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.6
CSNK1G3Q9Y6M4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CSNK1G3Q9Y6M4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CSNK1G3Q9Y6M4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CSNK1G3Q9Y6M4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
CSNK1G3Q9Y6M4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CSNK1G3Q9Y6M4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.05■■□□□ 1.6
CSNK1G3Q9Y6M4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CSNK1G3Q9Y6M4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CSNK1G3Q9Y6M4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CSNK1G3Q9Y6M4 AC148477.6-201ENST00000623746 465 ntBASIC25.05■■□□□ 1.6
CSNK1G3Q9Y6M4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CSNK1G3Q9Y6M4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
CSNK1G3Q9Y6M4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.04■■□□□ 1.6
CSNK1G3Q9Y6M4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
CSNK1G3Q9Y6M4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CSNK1G3Q9Y6M4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CSNK1G3Q9Y6M4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.02■■□□□ 1.6
CSNK1G3Q9Y6M4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CSNK1G3Q9Y6M4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CSNK1G3Q9Y6M4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.02■■□□□ 1.6
CSNK1G3Q9Y6M4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.01■■□□□ 1.59
CSNK1G3Q9Y6M4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
CSNK1G3Q9Y6M4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
CSNK1G3Q9Y6M4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25■■□□□ 1.59
CSNK1G3Q9Y6M4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25■■□□□ 1.59
CSNK1G3Q9Y6M4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 194 ms