Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.04■■□□□ 1.44
PCDHGA9Q9Y5G4 GPX1-201ENST00000419349 1106 ntBASIC24.04■■□□□ 1.44
PCDHGA9Q9Y5G4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.04■■□□□ 1.44
PCDHGA9Q9Y5G4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
PCDHGA9Q9Y5G4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PCDHGA9Q9Y5G4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGA9Q9Y5G4 RNF126P1-201ENST00000567452 1320 ntBASIC24.02■■□□□ 1.44
PCDHGA9Q9Y5G4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHGA9Q9Y5G4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHGA9Q9Y5G4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHGA9Q9Y5G4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.01■■□□□ 1.43
PCDHGA9Q9Y5G4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHGA9Q9Y5G4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHGA9Q9Y5G4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.01■■□□□ 1.43
PCDHGA9Q9Y5G4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHGA9Q9Y5G4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHGA9Q9Y5G4 AL161658.1-201ENST00000623641 1967 ntBASIC24■■□□□ 1.43
PCDHGA9Q9Y5G4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHGA9Q9Y5G4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24■■□□□ 1.43
PCDHGA9Q9Y5G4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24■■□□□ 1.43
PCDHGA9Q9Y5G4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHGA9Q9Y5G4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHGA9Q9Y5G4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHGA9Q9Y5G4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHGA9Q9Y5G4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
PCDHGA9Q9Y5G4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGA9Q9Y5G4 AC010864.1-201ENST00000609407 1511 ntBASIC23.98■■□□□ 1.43
PCDHGA9Q9Y5G4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHGA9Q9Y5G4 ABCB10P3-201ENST00000561950 2166 ntBASIC23.97■■□□□ 1.43
PCDHGA9Q9Y5G4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.96■■□□□ 1.43
PCDHGA9Q9Y5G4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGA9Q9Y5G4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
PCDHGA9Q9Y5G4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGA9Q9Y5G4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHGA9Q9Y5G4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGA9Q9Y5G4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHGA9Q9Y5G4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.94■■□□□ 1.42
PCDHGA9Q9Y5G4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGA9Q9Y5G4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
PCDHGA9Q9Y5G4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGA9Q9Y5G4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
PCDHGA9Q9Y5G4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGA9Q9Y5G4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
PCDHGA9Q9Y5G4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
PCDHGA9Q9Y5G4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGA9Q9Y5G4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGA9Q9Y5G4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGA9Q9Y5G4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.93■■□□□ 1.42
PCDHGA9Q9Y5G4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.93■■□□□ 1.42
PCDHGA9Q9Y5G4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
PCDHGA9Q9Y5G4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGA9Q9Y5G4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHGA9Q9Y5G4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.92■■□□□ 1.42
PCDHGA9Q9Y5G4 AC008813.1-201ENST00000536597 885 ntBASIC23.92■■□□□ 1.42
PCDHGA9Q9Y5G4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.91■■□□□ 1.42
PCDHGA9Q9Y5G4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.91■■□□□ 1.42
PCDHGA9Q9Y5G4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHGA9Q9Y5G4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGA9Q9Y5G4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGA9Q9Y5G4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGA9Q9Y5G4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGA9Q9Y5G4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
PCDHGA9Q9Y5G4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGA9Q9Y5G4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHGA9Q9Y5G4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.89■■□□□ 1.41
PCDHGA9Q9Y5G4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.89■■□□□ 1.41
PCDHGA9Q9Y5G4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHGA9Q9Y5G4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
PCDHGA9Q9Y5G4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
PCDHGA9Q9Y5G4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
PCDHGA9Q9Y5G4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGA9Q9Y5G4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGA9Q9Y5G4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGA9Q9Y5G4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDHGA9Q9Y5G4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.87■■□□□ 1.41
PCDHGA9Q9Y5G4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
PCDHGA9Q9Y5G4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.86■■□□□ 1.41
PCDHGA9Q9Y5G4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGA9Q9Y5G4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGA9Q9Y5G4 AC022413.1-201ENST00000624602 984 ntBASIC23.86■■□□□ 1.41
PCDHGA9Q9Y5G4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGA9Q9Y5G4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGA9Q9Y5G4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGA9Q9Y5G4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGA9Q9Y5G4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.84■■□□□ 1.41
PCDHGA9Q9Y5G4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.83■■□□□ 1.41
PCDHGA9Q9Y5G4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHGA9Q9Y5G4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.83■■□□□ 1.41
PCDHGA9Q9Y5G4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHGA9Q9Y5G4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGA9Q9Y5G4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGA9Q9Y5G4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHGA9Q9Y5G4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGA9Q9Y5G4 NTF6A-201ENST00000591175 560 ntBASIC23.8■■□□□ 1.4
PCDHGA9Q9Y5G4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGA9Q9Y5G4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGA9Q9Y5G4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGA9Q9Y5G4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHGA9Q9Y5G4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGA9Q9Y5G4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms