Protein–RNA interactions for Protein: Q9HCG8

CWC22, Pre-mRNA-splicing factor CWC22 homolog, humanhuman

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CWC22Q9HCG8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
CWC22Q9HCG8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CWC22Q9HCG8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.91■■■□□ 2.54
CWC22Q9HCG8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.9■■■□□ 2.54
CWC22Q9HCG8 MIR6090-201ENST00000622481 60 ntBASIC30.9■■■□□ 2.54
CWC22Q9HCG8 DRD5P2-201ENST00000421395 2012 ntBASIC30.9■■■□□ 2.54
CWC22Q9HCG8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.89■■■□□ 2.54
CWC22Q9HCG8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.89■■■□□ 2.54
CWC22Q9HCG8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
CWC22Q9HCG8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
CWC22Q9HCG8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CWC22Q9HCG8 MIR4449-201ENST00000578365 66 ntBASIC30.88■■■□□ 2.53
CWC22Q9HCG8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CWC22Q9HCG8 MIR639-201ENST00000384974 98 ntBASIC30.87■■■□□ 2.53
CWC22Q9HCG8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC30.87■■■□□ 2.53
CWC22Q9HCG8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
CWC22Q9HCG8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.86■■■□□ 2.53
CWC22Q9HCG8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
CWC22Q9HCG8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.85■■■□□ 2.53
CWC22Q9HCG8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CWC22Q9HCG8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CWC22Q9HCG8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CWC22Q9HCG8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.83■■■□□ 2.53
CWC22Q9HCG8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.83■■■□□ 2.53
CWC22Q9HCG8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.83■■■□□ 2.53
CWC22Q9HCG8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
CWC22Q9HCG8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
CWC22Q9HCG8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC30.82■■■□□ 2.52
CWC22Q9HCG8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
CWC22Q9HCG8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.82■■■□□ 2.52
CWC22Q9HCG8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CWC22Q9HCG8 AC016575.1-201ENST00000607026 382 ntBASIC30.81■■■□□ 2.52
CWC22Q9HCG8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.81■■■□□ 2.52
CWC22Q9HCG8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.81■■■□□ 2.52
CWC22Q9HCG8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CWC22Q9HCG8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
CWC22Q9HCG8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.8■■■□□ 2.52
CWC22Q9HCG8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.8■■■□□ 2.52
CWC22Q9HCG8 MIR3648-2-201ENST00000581792 180 ntBASIC30.79■■■□□ 2.52
CWC22Q9HCG8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.79■■■□□ 2.52
CWC22Q9HCG8 MIR3648-1-201ENST00000615959 180 ntBASIC30.79■■■□□ 2.52
CWC22Q9HCG8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
CWC22Q9HCG8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.78■■■□□ 2.52
CWC22Q9HCG8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.78■■■□□ 2.52
CWC22Q9HCG8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.78■■■□□ 2.52
CWC22Q9HCG8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CWC22Q9HCG8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.76■■■□□ 2.51
CWC22Q9HCG8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
CWC22Q9HCG8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CWC22Q9HCG8 DUX4L11-201ENST00000611504 1267 ntBASIC30.75■■■□□ 2.51
CWC22Q9HCG8 DUX4L12-201ENST00000614593 1267 ntBASIC30.75■■■□□ 2.51
CWC22Q9HCG8 LINC01971-201ENST00000617888 1048 ntBASIC30.75■■■□□ 2.51
CWC22Q9HCG8 DUX4L14-201ENST00000621227 1267 ntBASIC30.75■■■□□ 2.51
CWC22Q9HCG8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
CWC22Q9HCG8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CWC22Q9HCG8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
CWC22Q9HCG8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.73■■■□□ 2.51
CWC22Q9HCG8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CWC22Q9HCG8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CWC22Q9HCG8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.72■■■□□ 2.51
CWC22Q9HCG8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CWC22Q9HCG8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.71■■■□□ 2.51
CWC22Q9HCG8 AC010864.1-201ENST00000609407 1511 ntBASIC30.7■■■□□ 2.51
CWC22Q9HCG8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.7■■■□□ 2.51
CWC22Q9HCG8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CWC22Q9HCG8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CWC22Q9HCG8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC30.69■■■□□ 2.5
CWC22Q9HCG8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.69■■■□□ 2.5
CWC22Q9HCG8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CWC22Q9HCG8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CWC22Q9HCG8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
CWC22Q9HCG8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.68■■■□□ 2.5
CWC22Q9HCG8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CWC22Q9HCG8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CWC22Q9HCG8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.67■■■□□ 2.5
CWC22Q9HCG8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CWC22Q9HCG8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CWC22Q9HCG8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CWC22Q9HCG8 AL121749.1-202ENST00000609313 2153 ntBASIC30.66■■■□□ 2.5
CWC22Q9HCG8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CWC22Q9HCG8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CWC22Q9HCG8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
CWC22Q9HCG8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
CWC22Q9HCG8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CWC22Q9HCG8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
CWC22Q9HCG8 CR559946.2-201ENST00000623684 991 ntBASIC30.65■■■□□ 2.5
CWC22Q9HCG8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
CWC22Q9HCG8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CWC22Q9HCG8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CWC22Q9HCG8 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CWC22Q9HCG8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
CWC22Q9HCG8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CWC22Q9HCG8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
CWC22Q9HCG8 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CWC22Q9HCG8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
CWC22Q9HCG8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.61■■■□□ 2.49
CWC22Q9HCG8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.61■■■□□ 2.49
CWC22Q9HCG8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.6■■■□□ 2.49
CWC22Q9HCG8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
CWC22Q9HCG8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.59■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms