Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
CHMP4BQ9H444 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CHMP4BQ9H444 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
CHMP4BQ9H444 LINC00273-201ENST00000539813 1452 ntBASIC32.4■■■□□ 2.78
CHMP4BQ9H444 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
CHMP4BQ9H444 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
CHMP4BQ9H444 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC32.39■■■□□ 2.78
CHMP4BQ9H444 MEST-211ENST00000437945 1455 ntTSL 5 BASIC32.39■■■□□ 2.78
CHMP4BQ9H444 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
CHMP4BQ9H444 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
CHMP4BQ9H444 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
CHMP4BQ9H444 AC135983.2-203ENST00000454486 1613 ntBASIC32.38■■■□□ 2.77
CHMP4BQ9H444 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
CHMP4BQ9H444 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
CHMP4BQ9H444 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CHMP4BQ9H444 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC32.36■■■□□ 2.77
CHMP4BQ9H444 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC32.35■■■□□ 2.77
CHMP4BQ9H444 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC32.35■■■□□ 2.77
CHMP4BQ9H444 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC32.34■■■□□ 2.77
CHMP4BQ9H444 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CHMP4BQ9H444 BOD1-206ENST00000480951 814 ntTSL 2 BASIC32.34■■■□□ 2.77
CHMP4BQ9H444 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC32.34■■■□□ 2.77
CHMP4BQ9H444 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC32.33■■■□□ 2.77
CHMP4BQ9H444 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC32.32■■■□□ 2.76
CHMP4BQ9H444 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC32.31■■■□□ 2.76
CHMP4BQ9H444 AC100797.4-201ENST00000631653 1827 ntBASIC32.31■■■□□ 2.76
CHMP4BQ9H444 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CHMP4BQ9H444 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC32.31■■■□□ 2.76
CHMP4BQ9H444 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CHMP4BQ9H444 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC32.31■■■□□ 2.76
CHMP4BQ9H444 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CHMP4BQ9H444 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
CHMP4BQ9H444 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC32.3■■■□□ 2.76
CHMP4BQ9H444 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CHMP4BQ9H444 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC32.3■■■□□ 2.76
CHMP4BQ9H444 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC32.3■■■□□ 2.76
CHMP4BQ9H444 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC32.29■■■□□ 2.76
CHMP4BQ9H444 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC32.29■■■□□ 2.76
CHMP4BQ9H444 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
CHMP4BQ9H444 CALM3-209ENST00000597743 577 ntTSL 4 BASIC32.28■■■□□ 2.76
CHMP4BQ9H444 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC32.27■■■□□ 2.76
CHMP4BQ9H444 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
CHMP4BQ9H444 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
CHMP4BQ9H444 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
CHMP4BQ9H444 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC32.26■■■□□ 2.75
CHMP4BQ9H444 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
CHMP4BQ9H444 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
CHMP4BQ9H444 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC32.26■■■□□ 2.75
CHMP4BQ9H444 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
CHMP4BQ9H444 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
CHMP4BQ9H444 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC32.25■■■□□ 2.75
CHMP4BQ9H444 WHAMMP2-203ENST00000563942 1603 ntBASIC32.25■■■□□ 2.75
CHMP4BQ9H444 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
CHMP4BQ9H444 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
CHMP4BQ9H444 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC32.23■■■□□ 2.75
CHMP4BQ9H444 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CHMP4BQ9H444 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC32.23■■■□□ 2.75
CHMP4BQ9H444 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC32.23■■■□□ 2.75
CHMP4BQ9H444 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
CHMP4BQ9H444 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CHMP4BQ9H444 AP002414.2-202ENST00000590929 1450 ntBASIC32.22■■■□□ 2.75
CHMP4BQ9H444 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
CHMP4BQ9H444 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC32.21■■■□□ 2.75
CHMP4BQ9H444 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC32.21■■■□□ 2.75
CHMP4BQ9H444 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CHMP4BQ9H444 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC32.2■■■□□ 2.75
CHMP4BQ9H444 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
CHMP4BQ9H444 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC32.2■■■□□ 2.75
CHMP4BQ9H444 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
CHMP4BQ9H444 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC32.18■■■□□ 2.74
CHMP4BQ9H444 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
CHMP4BQ9H444 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC32.18■■■□□ 2.74
CHMP4BQ9H444 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
CHMP4BQ9H444 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC32.17■■■□□ 2.74
CHMP4BQ9H444 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC32.17■■■□□ 2.74
CHMP4BQ9H444 DUX4L29-201ENST00000425409 679 ntBASIC32.17■■■□□ 2.74
CHMP4BQ9H444 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC32.17■■■□□ 2.74
CHMP4BQ9H444 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
CHMP4BQ9H444 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
CHMP4BQ9H444 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
CHMP4BQ9H444 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC32.15■■■□□ 2.74
CHMP4BQ9H444 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
CHMP4BQ9H444 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
CHMP4BQ9H444 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC32.13■■■□□ 2.73
CHMP4BQ9H444 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
CHMP4BQ9H444 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC32.12■■■□□ 2.73
CHMP4BQ9H444 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
CHMP4BQ9H444 RPS2P35-201ENST00000443417 897 ntBASIC32.12■■■□□ 2.73
CHMP4BQ9H444 BX255925.1-201ENST00000566954 1854 ntBASIC32.12■■■□□ 2.73
CHMP4BQ9H444 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
CHMP4BQ9H444 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CHMP4BQ9H444 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
CHMP4BQ9H444 AC021231.2-201ENST00000594613 730 ntBASIC32.11■■■□□ 2.73
CHMP4BQ9H444 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC32.11■■■□□ 2.73
CHMP4BQ9H444 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CHMP4BQ9H444 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
CHMP4BQ9H444 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC32.09■■■□□ 2.73
CHMP4BQ9H444 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC32.08■■■□□ 2.73
CHMP4BQ9H444 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC32.08■■■□□ 2.73
CHMP4BQ9H444 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms