Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CDC42EP4Q9H3Q1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.14■■□□□ 1.78
CDC42EP4Q9H3Q1 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CDC42EP4Q9H3Q1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CDC42EP4Q9H3Q1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDC42EP4Q9H3Q1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDC42EP4Q9H3Q1 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDC42EP4Q9H3Q1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CDC42EP4Q9H3Q1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CDC42EP4Q9H3Q1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
CDC42EP4Q9H3Q1 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CDC42EP4Q9H3Q1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CDC42EP4Q9H3Q1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.12■■□□□ 1.77
CDC42EP4Q9H3Q1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CDC42EP4Q9H3Q1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CDC42EP4Q9H3Q1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.09■■□□□ 1.77
CDC42EP4Q9H3Q1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CDC42EP4Q9H3Q1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CDC42EP4Q9H3Q1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
CDC42EP4Q9H3Q1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.09■■□□□ 1.77
CDC42EP4Q9H3Q1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CDC42EP4Q9H3Q1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CDC42EP4Q9H3Q1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.08■■□□□ 1.77
CDC42EP4Q9H3Q1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.08■■□□□ 1.77
CDC42EP4Q9H3Q1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
CDC42EP4Q9H3Q1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.08■■□□□ 1.77
CDC42EP4Q9H3Q1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.08■■□□□ 1.77
CDC42EP4Q9H3Q1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CDC42EP4Q9H3Q1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.08■■□□□ 1.76
CDC42EP4Q9H3Q1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CDC42EP4Q9H3Q1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CDC42EP4Q9H3Q1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CDC42EP4Q9H3Q1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.06■■□□□ 1.76
CDC42EP4Q9H3Q1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CDC42EP4Q9H3Q1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.06■■□□□ 1.76
CDC42EP4Q9H3Q1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.05■■□□□ 1.76
CDC42EP4Q9H3Q1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
CDC42EP4Q9H3Q1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.05■■□□□ 1.76
CDC42EP4Q9H3Q1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CDC42EP4Q9H3Q1 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CDC42EP4Q9H3Q1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CDC42EP4Q9H3Q1 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.04■■□□□ 1.76
CDC42EP4Q9H3Q1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
CDC42EP4Q9H3Q1 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CDC42EP4Q9H3Q1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CDC42EP4Q9H3Q1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.04■■□□□ 1.76
CDC42EP4Q9H3Q1 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.03■■□□□ 1.76
CDC42EP4Q9H3Q1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDC42EP4Q9H3Q1 AC100797.4-201ENST00000631653 1827 ntBASIC26.03■■□□□ 1.76
CDC42EP4Q9H3Q1 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CDC42EP4Q9H3Q1 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDC42EP4Q9H3Q1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDC42EP4Q9H3Q1 AC135731.1-201ENST00000569415 2548 ntBASIC26.02■■□□□ 1.76
CDC42EP4Q9H3Q1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDC42EP4Q9H3Q1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDC42EP4Q9H3Q1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.02■■□□□ 1.76
CDC42EP4Q9H3Q1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
CDC42EP4Q9H3Q1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CDC42EP4Q9H3Q1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26■■□□□ 1.75
CDC42EP4Q9H3Q1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CDC42EP4Q9H3Q1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CDC42EP4Q9H3Q1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
CDC42EP4Q9H3Q1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26■■□□□ 1.75
CDC42EP4Q9H3Q1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
CDC42EP4Q9H3Q1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CDC42EP4Q9H3Q1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CDC42EP4Q9H3Q1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
CDC42EP4Q9H3Q1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CDC42EP4Q9H3Q1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CDC42EP4Q9H3Q1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.98■■□□□ 1.75
CDC42EP4Q9H3Q1 SETD8P1-201ENST00000623146 1180 ntBASIC25.98■■□□□ 1.75
CDC42EP4Q9H3Q1 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CDC42EP4Q9H3Q1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CDC42EP4Q9H3Q1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.97■■□□□ 1.75
CDC42EP4Q9H3Q1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.96■■□□□ 1.75
CDC42EP4Q9H3Q1 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
CDC42EP4Q9H3Q1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CDC42EP4Q9H3Q1 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
CDC42EP4Q9H3Q1 RARRES2P7-201ENST00000567349 469 ntBASIC25.95■■□□□ 1.74
CDC42EP4Q9H3Q1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
CDC42EP4Q9H3Q1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CDC42EP4Q9H3Q1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CDC42EP4Q9H3Q1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CDC42EP4Q9H3Q1 AL449106.1-201ENST00000608517 1980 ntBASIC25.91■■□□□ 1.74
CDC42EP4Q9H3Q1 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.91■■□□□ 1.74
CDC42EP4Q9H3Q1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CDC42EP4Q9H3Q1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.91■■□□□ 1.74
CDC42EP4Q9H3Q1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CDC42EP4Q9H3Q1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CDC42EP4Q9H3Q1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CDC42EP4Q9H3Q1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.9■■□□□ 1.74
CDC42EP4Q9H3Q1 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.9■■□□□ 1.74
CDC42EP4Q9H3Q1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.9■■□□□ 1.74
CDC42EP4Q9H3Q1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CDC42EP4Q9H3Q1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
CDC42EP4Q9H3Q1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CDC42EP4Q9H3Q1 AP002414.2-202ENST00000590929 1450 ntBASIC25.88■■□□□ 1.73
CDC42EP4Q9H3Q1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CDC42EP4Q9H3Q1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.87■■□□□ 1.73
CDC42EP4Q9H3Q1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms