Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
SLC6A7Q99884 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
SLC6A7Q99884 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
SLC6A7Q99884 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SLC6A7Q99884 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SLC6A7Q99884 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SLC6A7Q99884 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
SLC6A7Q99884 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC6A7Q99884 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC6A7Q99884 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SLC6A7Q99884 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC6A7Q99884 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SLC6A7Q99884 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SLC6A7Q99884 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.06■■□□□ 1.12
SLC6A7Q99884 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.06■■□□□ 1.12
SLC6A7Q99884 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SLC6A7Q99884 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
SLC6A7Q99884 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
SLC6A7Q99884 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
SLC6A7Q99884 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SLC6A7Q99884 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.05■■□□□ 1.12
SLC6A7Q99884 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.05■■□□□ 1.12
SLC6A7Q99884 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SLC6A7Q99884 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC6A7Q99884 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.04■■□□□ 1.12
SLC6A7Q99884 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SLC6A7Q99884 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.04■■□□□ 1.12
SLC6A7Q99884 HLA-V-202ENST00000446817 847 ntBASIC22.03■■□□□ 1.12
SLC6A7Q99884 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC22.03■■□□□ 1.12
SLC6A7Q99884 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SLC6A7Q99884 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
SLC6A7Q99884 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SLC6A7Q99884 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.02■■□□□ 1.12
SLC6A7Q99884 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC22.02■■□□□ 1.12
SLC6A7Q99884 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.01■■□□□ 1.11
SLC6A7Q99884 MBP-237ENST00000579129 1052 ntTSL 5 BASIC22.01■■□□□ 1.11
SLC6A7Q99884 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
SLC6A7Q99884 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC6A7Q99884 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC6A7Q99884 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SLC6A7Q99884 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SLC6A7Q99884 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22■■□□□ 1.11
SLC6A7Q99884 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22■■□□□ 1.11
SLC6A7Q99884 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SLC6A7Q99884 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SLC6A7Q99884 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22■■□□□ 1.11
SLC6A7Q99884 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SLC6A7Q99884 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC6A7Q99884 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC6A7Q99884 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC6A7Q99884 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
SLC6A7Q99884 ZNRF2P2-203ENST00000454624 420 ntBASIC21.98■■□□□ 1.11
SLC6A7Q99884 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC6A7Q99884 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC6A7Q99884 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SLC6A7Q99884 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.96■■□□□ 1.11
SLC6A7Q99884 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A7Q99884 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A7Q99884 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A7Q99884 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A7Q99884 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A7Q99884 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
SLC6A7Q99884 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.95■■□□□ 1.1
SLC6A7Q99884 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.95■■□□□ 1.1
SLC6A7Q99884 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SLC6A7Q99884 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.95■■□□□ 1.1
SLC6A7Q99884 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.95■■□□□ 1.1
SLC6A7Q99884 AC135731.1-201ENST00000569415 2548 ntBASIC21.95■■□□□ 1.1
SLC6A7Q99884 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC6A7Q99884 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC6A7Q99884 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC6A7Q99884 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC6A7Q99884 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC6A7Q99884 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SLC6A7Q99884 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC6A7Q99884 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SLC6A7Q99884 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SLC6A7Q99884 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SLC6A7Q99884 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC6A7Q99884 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SLC6A7Q99884 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.91■■□□□ 1.1
SLC6A7Q99884 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.91■■□□□ 1.1
SLC6A7Q99884 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC6A7Q99884 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC6A7Q99884 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC6A7Q99884 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.9■■□□□ 1.1
SLC6A7Q99884 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.9■■□□□ 1.1
SLC6A7Q99884 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SLC6A7Q99884 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SLC6A7Q99884 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SLC6A7Q99884 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SLC6A7Q99884 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.89■■□□□ 1.09
SLC6A7Q99884 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SLC6A7Q99884 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC6A7Q99884 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC6A7Q99884 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC6A7Q99884 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SLC6A7Q99884 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SLC6A7Q99884 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SLC6A7Q99884 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms