Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.21■■□□□ 1.95
SMOQ99835 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
SMOQ99835 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
SMOQ99835 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SMOQ99835 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.19■■□□□ 1.94
SMOQ99835 AL139393.2-201ENST00000608721 2025 ntBASIC27.19■■□□□ 1.94
SMOQ99835 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SMOQ99835 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SMOQ99835 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
SMOQ99835 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SMOQ99835 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SMOQ99835 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SMOQ99835 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.17■■□□□ 1.94
SMOQ99835 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SMOQ99835 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SMOQ99835 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.16■■□□□ 1.94
SMOQ99835 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.16■■□□□ 1.94
SMOQ99835 MBP-237ENST00000579129 1052 ntTSL 5 BASIC27.16■■□□□ 1.94
SMOQ99835 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.16■■□□□ 1.94
SMOQ99835 AC016575.1-201ENST00000607026 382 ntBASIC27.16■■□□□ 1.94
SMOQ99835 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SMOQ99835 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SMOQ99835 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.15■■□□□ 1.94
SMOQ99835 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.15■■□□□ 1.94
SMOQ99835 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
SMOQ99835 AP004833.2-201ENST00000532228 1454 ntBASIC27.14■■□□□ 1.94
SMOQ99835 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.94
SMOQ99835 HLA-V-202ENST00000446817 847 ntBASIC27.14■■□□□ 1.94
SMOQ99835 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.13■■□□□ 1.93
SMOQ99835 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SMOQ99835 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SMOQ99835 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
SMOQ99835 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SMOQ99835 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
SMOQ99835 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SMOQ99835 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.11■■□□□ 1.93
SMOQ99835 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SMOQ99835 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.11■■□□□ 1.93
SMOQ99835 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SMOQ99835 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.11■■□□□ 1.93
SMOQ99835 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.1■■□□□ 1.93
SMOQ99835 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
SMOQ99835 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SMOQ99835 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SMOQ99835 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.09■■□□□ 1.93
SMOQ99835 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.08■■□□□ 1.93
SMOQ99835 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
SMOQ99835 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.08■■□□□ 1.92
SMOQ99835 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.07■■□□□ 1.92
SMOQ99835 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC27.07■■□□□ 1.92
SMOQ99835 MIR639-201ENST00000384974 98 ntBASIC27.06■■□□□ 1.92
SMOQ99835 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SMOQ99835 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SMOQ99835 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SMOQ99835 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.05■■□□□ 1.92
SMOQ99835 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.05■■□□□ 1.92
SMOQ99835 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.05■■□□□ 1.92
SMOQ99835 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SMOQ99835 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC27.04■■□□□ 1.92
SMOQ99835 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
SMOQ99835 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
SMOQ99835 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
SMOQ99835 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.03■■□□□ 1.92
SMOQ99835 AC100797.4-201ENST00000631653 1827 ntBASIC27.03■■□□□ 1.92
SMOQ99835 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
SMOQ99835 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.02■■□□□ 1.92
SMOQ99835 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
SMOQ99835 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC27.02■■□□□ 1.92
SMOQ99835 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.02■■□□□ 1.92
SMOQ99835 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
SMOQ99835 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.02■■□□□ 1.92
SMOQ99835 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
SMOQ99835 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
SMOQ99835 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
SMOQ99835 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27■■□□□ 1.91
SMOQ99835 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
SMOQ99835 AC139426.1-201ENST00000568218 2529 ntBASIC26.99■■□□□ 1.91
SMOQ99835 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SMOQ99835 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.99■■□□□ 1.91
SMOQ99835 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
SMOQ99835 ABCB10P3-201ENST00000561950 2166 ntBASIC26.99■■□□□ 1.91
SMOQ99835 AC110285.7-201ENST00000624417 1536 ntBASIC26.99■■□□□ 1.91
SMOQ99835 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SMOQ99835 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SMOQ99835 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.98■■□□□ 1.91
SMOQ99835 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
SMOQ99835 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
SMOQ99835 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SMOQ99835 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SMOQ99835 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SMOQ99835 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
SMOQ99835 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.95■■□□□ 1.91
SMOQ99835 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.95■■□□□ 1.9
SMOQ99835 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SMOQ99835 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
SMOQ99835 MIR4449-201ENST00000578365 66 ntBASIC26.94■■□□□ 1.9
SMOQ99835 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.94■■□□□ 1.9
SMOQ99835 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.94■■□□□ 1.9
SMOQ99835 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SMOQ99835 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms