Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PDLIM5Q96HC4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PDLIM5Q96HC4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
PDLIM5Q96HC4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PDLIM5Q96HC4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PDLIM5Q96HC4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.19■■□□□ 1.62
PDLIM5Q96HC4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.18■■□□□ 1.62
PDLIM5Q96HC4 AC100797.4-201ENST00000631653 1827 ntBASIC25.18■■□□□ 1.62
PDLIM5Q96HC4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
PDLIM5Q96HC4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
PDLIM5Q96HC4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
PDLIM5Q96HC4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PDLIM5Q96HC4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
PDLIM5Q96HC4 LINC00273-201ENST00000539813 1452 ntBASIC25.16■■□□□ 1.62
PDLIM5Q96HC4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.16■■□□□ 1.62
PDLIM5Q96HC4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PDLIM5Q96HC4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PDLIM5Q96HC4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.15■■□□□ 1.62
PDLIM5Q96HC4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PDLIM5Q96HC4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.15■■□□□ 1.62
PDLIM5Q96HC4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.15■■□□□ 1.62
PDLIM5Q96HC4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.14■■□□□ 1.62
PDLIM5Q96HC4 AC044849.2-201ENST00000606596 710 ntBASIC25.14■■□□□ 1.62
PDLIM5Q96HC4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
PDLIM5Q96HC4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
PDLIM5Q96HC4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PDLIM5Q96HC4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PDLIM5Q96HC4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.13■■□□□ 1.61
PDLIM5Q96HC4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
PDLIM5Q96HC4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PDLIM5Q96HC4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PDLIM5Q96HC4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.12■■□□□ 1.61
PDLIM5Q96HC4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.11■■□□□ 1.61
PDLIM5Q96HC4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PDLIM5Q96HC4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
PDLIM5Q96HC4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.11■■□□□ 1.61
PDLIM5Q96HC4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
PDLIM5Q96HC4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PDLIM5Q96HC4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.1■■□□□ 1.61
PDLIM5Q96HC4 WHAMMP2-203ENST00000563942 1603 ntBASIC25.1■■□□□ 1.61
PDLIM5Q96HC4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
PDLIM5Q96HC4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
PDLIM5Q96HC4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PDLIM5Q96HC4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
PDLIM5Q96HC4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PDLIM5Q96HC4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PDLIM5Q96HC4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
PDLIM5Q96HC4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PDLIM5Q96HC4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PDLIM5Q96HC4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PDLIM5Q96HC4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
PDLIM5Q96HC4 AP002414.2-202ENST00000590929 1450 ntBASIC25.07■■□□□ 1.6
PDLIM5Q96HC4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PDLIM5Q96HC4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
PDLIM5Q96HC4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PDLIM5Q96HC4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.06■■□□□ 1.6
PDLIM5Q96HC4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.06■■□□□ 1.6
PDLIM5Q96HC4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
PDLIM5Q96HC4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.05■■□□□ 1.6
PDLIM5Q96HC4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.05■■□□□ 1.6
PDLIM5Q96HC4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PDLIM5Q96HC4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PDLIM5Q96HC4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
PDLIM5Q96HC4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PDLIM5Q96HC4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
PDLIM5Q96HC4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
PDLIM5Q96HC4 BX255925.1-201ENST00000566954 1854 ntBASIC25.03■■□□□ 1.6
PDLIM5Q96HC4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PDLIM5Q96HC4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.03■■□□□ 1.6
PDLIM5Q96HC4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.03■■□□□ 1.6
PDLIM5Q96HC4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.03■■□□□ 1.6
PDLIM5Q96HC4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PDLIM5Q96HC4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.02■■□□□ 1.6
PDLIM5Q96HC4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.02■■□□□ 1.6
PDLIM5Q96HC4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.02■■□□□ 1.6
PDLIM5Q96HC4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.01■■□□□ 1.59
PDLIM5Q96HC4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.01■■□□□ 1.59
PDLIM5Q96HC4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.99■■□□□ 1.59
PDLIM5Q96HC4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDLIM5Q96HC4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDLIM5Q96HC4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
PDLIM5Q96HC4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PDLIM5Q96HC4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDLIM5Q96HC4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDLIM5Q96HC4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PDLIM5Q96HC4 LINC01003-201ENST00000564834 1764 ntBASIC24.97■■□□□ 1.59
PDLIM5Q96HC4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.97■■□□□ 1.59
PDLIM5Q96HC4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PDLIM5Q96HC4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PDLIM5Q96HC4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PDLIM5Q96HC4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.96■■□□□ 1.59
PDLIM5Q96HC4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.96■■□□□ 1.59
PDLIM5Q96HC4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PDLIM5Q96HC4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PDLIM5Q96HC4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.95■■□□□ 1.58
PDLIM5Q96HC4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PDLIM5Q96HC4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PDLIM5Q96HC4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
PDLIM5Q96HC4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
PDLIM5Q96HC4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms