Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CHPFQ8IZ52 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
CHPFQ8IZ52 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
CHPFQ8IZ52 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CHPFQ8IZ52 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.25■■□□□ 1.79
CHPFQ8IZ52 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHPFQ8IZ52 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
CHPFQ8IZ52 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.24■■□□□ 1.79
CHPFQ8IZ52 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CHPFQ8IZ52 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.24■■□□□ 1.79
CHPFQ8IZ52 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.24■■□□□ 1.79
CHPFQ8IZ52 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CHPFQ8IZ52 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHPFQ8IZ52 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.23■■□□□ 1.79
CHPFQ8IZ52 AC135983.2-203ENST00000454486 1613 ntBASIC26.23■■□□□ 1.79
CHPFQ8IZ52 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHPFQ8IZ52 WHAMMP2-203ENST00000563942 1603 ntBASIC26.22■■□□□ 1.79
CHPFQ8IZ52 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
CHPFQ8IZ52 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.22■■□□□ 1.79
CHPFQ8IZ52 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHPFQ8IZ52 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHPFQ8IZ52 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
CHPFQ8IZ52 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
CHPFQ8IZ52 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
CHPFQ8IZ52 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.2■■□□□ 1.79
CHPFQ8IZ52 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CHPFQ8IZ52 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.2■■□□□ 1.78
CHPFQ8IZ52 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CHPFQ8IZ52 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CHPFQ8IZ52 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
CHPFQ8IZ52 GPX1-201ENST00000419349 1106 ntBASIC26.16■■□□□ 1.78
CHPFQ8IZ52 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CHPFQ8IZ52 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.16■■□□□ 1.78
CHPFQ8IZ52 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
CHPFQ8IZ52 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CHPFQ8IZ52 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
CHPFQ8IZ52 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CHPFQ8IZ52 AC008813.1-201ENST00000536597 885 ntBASIC26.14■■□□□ 1.78
CHPFQ8IZ52 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.14■■□□□ 1.77
CHPFQ8IZ52 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CHPFQ8IZ52 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHPFQ8IZ52 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.13■■□□□ 1.77
CHPFQ8IZ52 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.13■■□□□ 1.77
CHPFQ8IZ52 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHPFQ8IZ52 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.12■■□□□ 1.77
CHPFQ8IZ52 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.12■■□□□ 1.77
CHPFQ8IZ52 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHPFQ8IZ52 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHPFQ8IZ52 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.11■■□□□ 1.77
CHPFQ8IZ52 RARRES2P2-201ENST00000394842 485 ntBASIC26.11■■□□□ 1.77
CHPFQ8IZ52 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CHPFQ8IZ52 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
CHPFQ8IZ52 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CHPFQ8IZ52 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CHPFQ8IZ52 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.1■■□□□ 1.77
CHPFQ8IZ52 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CHPFQ8IZ52 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CHPFQ8IZ52 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHPFQ8IZ52 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.09■■□□□ 1.77
CHPFQ8IZ52 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHPFQ8IZ52 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHPFQ8IZ52 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHPFQ8IZ52 AC110285.7-201ENST00000624417 1536 ntBASIC26.09■■□□□ 1.77
CHPFQ8IZ52 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CHPFQ8IZ52 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.07■■□□□ 1.76
CHPFQ8IZ52 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
CHPFQ8IZ52 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.07■■□□□ 1.76
CHPFQ8IZ52 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CHPFQ8IZ52 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
CHPFQ8IZ52 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.06■■□□□ 1.76
CHPFQ8IZ52 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.06■■□□□ 1.76
CHPFQ8IZ52 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CHPFQ8IZ52 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CHPFQ8IZ52 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
CHPFQ8IZ52 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.05■■□□□ 1.76
CHPFQ8IZ52 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.05■■□□□ 1.76
CHPFQ8IZ52 RNF126P1-201ENST00000567452 1320 ntBASIC26.05■■□□□ 1.76
CHPFQ8IZ52 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CHPFQ8IZ52 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CHPFQ8IZ52 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CHPFQ8IZ52 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CHPFQ8IZ52 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CHPFQ8IZ52 AC022413.1-201ENST00000624602 984 ntBASIC26.03■■□□□ 1.76
CHPFQ8IZ52 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
CHPFQ8IZ52 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CHPFQ8IZ52 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CHPFQ8IZ52 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CHPFQ8IZ52 ABHD17AP5-201ENST00000580133 923 ntBASIC26.01■■□□□ 1.75
CHPFQ8IZ52 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26■■□□□ 1.75
CHPFQ8IZ52 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26■■□□□ 1.75
CHPFQ8IZ52 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26■■□□□ 1.75
CHPFQ8IZ52 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
CHPFQ8IZ52 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26■■□□□ 1.75
CHPFQ8IZ52 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHPFQ8IZ52 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CHPFQ8IZ52 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.99■■□□□ 1.75
CHPFQ8IZ52 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHPFQ8IZ52 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CHPFQ8IZ52 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CHPFQ8IZ52 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.98■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms