Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
LINC00346Q8IVM7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.65■■□□□ 1.22
LINC00346Q8IVM7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.65■■□□□ 1.22
LINC00346Q8IVM7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
LINC00346Q8IVM7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
LINC00346Q8IVM7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
LINC00346Q8IVM7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
LINC00346Q8IVM7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC22.64■■□□□ 1.21
LINC00346Q8IVM7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
LINC00346Q8IVM7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
LINC00346Q8IVM7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
LINC00346Q8IVM7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
LINC00346Q8IVM7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
LINC00346Q8IVM7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.62■■□□□ 1.21
LINC00346Q8IVM7 AC100797.4-201ENST00000631653 1827 ntBASIC22.61■■□□□ 1.21
LINC00346Q8IVM7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
LINC00346Q8IVM7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LINC00346Q8IVM7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
LINC00346Q8IVM7 AC108673.1-201ENST00000510422 1159 ntBASIC22.61■■□□□ 1.21
LINC00346Q8IVM7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.61■■□□□ 1.21
LINC00346Q8IVM7 MIR3665-201ENST00000578708 105 ntBASIC22.61■■□□□ 1.21
LINC00346Q8IVM7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LINC00346Q8IVM7 MIR6090-201ENST00000622481 60 ntBASIC22.61■■□□□ 1.21
LINC00346Q8IVM7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LINC00346Q8IVM7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
LINC00346Q8IVM7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LINC00346Q8IVM7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
LINC00346Q8IVM7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.6■■□□□ 1.21
LINC00346Q8IVM7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
LINC00346Q8IVM7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.6■■□□□ 1.21
LINC00346Q8IVM7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LINC00346Q8IVM7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LINC00346Q8IVM7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.58■■□□□ 1.21
LINC00346Q8IVM7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LINC00346Q8IVM7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
LINC00346Q8IVM7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
LINC00346Q8IVM7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
LINC00346Q8IVM7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC22.57■■□□□ 1.2
LINC00346Q8IVM7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LINC00346Q8IVM7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
LINC00346Q8IVM7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
LINC00346Q8IVM7 AP006261.1-201ENST00000584783 668 ntBASIC22.56■■□□□ 1.2
LINC00346Q8IVM7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LINC00346Q8IVM7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LINC00346Q8IVM7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC22.54■■□□□ 1.2
LINC00346Q8IVM7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.54■■□□□ 1.2
LINC00346Q8IVM7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
LINC00346Q8IVM7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.54■■□□□ 1.2
LINC00346Q8IVM7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LINC00346Q8IVM7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
LINC00346Q8IVM7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LINC00346Q8IVM7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LINC00346Q8IVM7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.53■■□□□ 1.2
LINC00346Q8IVM7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.52■■□□□ 1.2
LINC00346Q8IVM7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LINC00346Q8IVM7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LINC00346Q8IVM7 AL162393.1-201ENST00000437852 946 ntBASIC22.51■■□□□ 1.19
LINC00346Q8IVM7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LINC00346Q8IVM7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
LINC00346Q8IVM7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
LINC00346Q8IVM7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
LINC00346Q8IVM7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.5■■□□□ 1.19
LINC00346Q8IVM7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
LINC00346Q8IVM7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.49■■□□□ 1.19
LINC00346Q8IVM7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.49■■□□□ 1.19
LINC00346Q8IVM7 AC087741.3-201ENST00000624270 1347 ntBASIC22.49■■□□□ 1.19
LINC00346Q8IVM7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LINC00346Q8IVM7 AC135983.2-203ENST00000454486 1613 ntBASIC22.49■■□□□ 1.19
LINC00346Q8IVM7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.48■■□□□ 1.19
LINC00346Q8IVM7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.48■■□□□ 1.19
LINC00346Q8IVM7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
LINC00346Q8IVM7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.48■■□□□ 1.19
LINC00346Q8IVM7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.48■■□□□ 1.19
LINC00346Q8IVM7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
LINC00346Q8IVM7 WHAMMP2-203ENST00000563942 1603 ntBASIC22.47■■□□□ 1.19
LINC00346Q8IVM7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
LINC00346Q8IVM7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
LINC00346Q8IVM7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LINC00346Q8IVM7 BX255925.1-201ENST00000566954 1854 ntBASIC22.46■■□□□ 1.19
LINC00346Q8IVM7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LINC00346Q8IVM7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
LINC00346Q8IVM7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
LINC00346Q8IVM7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
LINC00346Q8IVM7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
LINC00346Q8IVM7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
LINC00346Q8IVM7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
LINC00346Q8IVM7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LINC00346Q8IVM7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LINC00346Q8IVM7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LINC00346Q8IVM7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC22.44■■□□□ 1.18
LINC00346Q8IVM7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.44■■□□□ 1.18
LINC00346Q8IVM7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.44■■□□□ 1.18
LINC00346Q8IVM7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.43■■□□□ 1.18
LINC00346Q8IVM7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC22.43■■□□□ 1.18
LINC00346Q8IVM7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
LINC00346Q8IVM7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
LINC00346Q8IVM7 LINC00273-201ENST00000539813 1452 ntBASIC22.42■■□□□ 1.18
LINC00346Q8IVM7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LINC00346Q8IVM7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LINC00346Q8IVM7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms