Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
PPP4R3CPQ6ZMV5 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
PPP4R3CPQ6ZMV5 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
PPP4R3CPQ6ZMV5 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.77■■■□□ 2.2
PPP4R3CPQ6ZMV5 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.77■■■□□ 2.2
PPP4R3CPQ6ZMV5 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.76■■■□□ 2.19
PPP4R3CPQ6ZMV5 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.76■■■□□ 2.19
PPP4R3CPQ6ZMV5 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
PPP4R3CPQ6ZMV5 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PPP4R3CPQ6ZMV5 AC090142.2-201ENST00000483263 416 ntBASIC28.75■■■□□ 2.19
PPP4R3CPQ6ZMV5 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.75■■■□□ 2.19
PPP4R3CPQ6ZMV5 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.73■■■□□ 2.19
PPP4R3CPQ6ZMV5 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
PPP4R3CPQ6ZMV5 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
PPP4R3CPQ6ZMV5 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
PPP4R3CPQ6ZMV5 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
PPP4R3CPQ6ZMV5 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.73■■■□□ 2.19
PPP4R3CPQ6ZMV5 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
PPP4R3CPQ6ZMV5 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.72■■■□□ 2.19
PPP4R3CPQ6ZMV5 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
PPP4R3CPQ6ZMV5 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.72■■■□□ 2.19
PPP4R3CPQ6ZMV5 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
PPP4R3CPQ6ZMV5 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
PPP4R3CPQ6ZMV5 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
PPP4R3CPQ6ZMV5 AL139393.2-201ENST00000608721 2025 ntBASIC28.7■■■□□ 2.19
PPP4R3CPQ6ZMV5 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
PPP4R3CPQ6ZMV5 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.18
PPP4R3CPQ6ZMV5 AC012497.1-201ENST00000429392 575 ntBASIC28.7■■■□□ 2.18
PPP4R3CPQ6ZMV5 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
PPP4R3CPQ6ZMV5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.69■■■□□ 2.18
PPP4R3CPQ6ZMV5 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
PPP4R3CPQ6ZMV5 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.68■■■□□ 2.18
PPP4R3CPQ6ZMV5 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC28.68■■■□□ 2.18
PPP4R3CPQ6ZMV5 AC005786.4-201ENST00000623369 682 ntBASIC28.68■■■□□ 2.18
PPP4R3CPQ6ZMV5 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PPP4R3CPQ6ZMV5 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PPP4R3CPQ6ZMV5 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
PPP4R3CPQ6ZMV5 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.67■■■□□ 2.18
PPP4R3CPQ6ZMV5 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
PPP4R3CPQ6ZMV5 MTND4LP12-201ENST00000448237 295 ntBASIC28.66■■■□□ 2.18
PPP4R3CPQ6ZMV5 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.66■■■□□ 2.18
PPP4R3CPQ6ZMV5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC28.65■■■□□ 2.18
PPP4R3CPQ6ZMV5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
PPP4R3CPQ6ZMV5 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
PPP4R3CPQ6ZMV5 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.65■■■□□ 2.18
PPP4R3CPQ6ZMV5 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.64■■■□□ 2.18
PPP4R3CPQ6ZMV5 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
PPP4R3CPQ6ZMV5 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.64■■■□□ 2.18
PPP4R3CPQ6ZMV5 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.64■■■□□ 2.18
PPP4R3CPQ6ZMV5 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
PPP4R3CPQ6ZMV5 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
PPP4R3CPQ6ZMV5 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
PPP4R3CPQ6ZMV5 LST1-206ENST00000376090 689 ntTSL 2 BASIC28.62■■■□□ 2.17
PPP4R3CPQ6ZMV5 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
PPP4R3CPQ6ZMV5 LST1-209ENST00000376096 565 ntTSL 2 BASIC28.62■■■□□ 2.17
PPP4R3CPQ6ZMV5 LST1-210ENST00000376099 610 ntTSL 2 BASIC28.62■■■□□ 2.17
PPP4R3CPQ6ZMV5 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
PPP4R3CPQ6ZMV5 LST1-214ENST00000418507 726 ntTSL 2 BASIC28.62■■■□□ 2.17
PPP4R3CPQ6ZMV5 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
PPP4R3CPQ6ZMV5 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PPP4R3CPQ6ZMV5 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
PPP4R3CPQ6ZMV5 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC28.61■■■□□ 2.17
PPP4R3CPQ6ZMV5 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.61■■■□□ 2.17
PPP4R3CPQ6ZMV5 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
PPP4R3CPQ6ZMV5 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.61■■■□□ 2.17
PPP4R3CPQ6ZMV5 LINC01971-201ENST00000617888 1048 ntBASIC28.61■■■□□ 2.17
PPP4R3CPQ6ZMV5 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PPP4R3CPQ6ZMV5 AC092473.1-201ENST00000441098 221 ntBASIC28.59■■■□□ 2.17
PPP4R3CPQ6ZMV5 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PPP4R3CPQ6ZMV5 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.58■■■□□ 2.17
PPP4R3CPQ6ZMV5 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PPP4R3CPQ6ZMV5 AP003400.6-201ENST00000624698 740 ntBASIC28.57■■■□□ 2.16
PPP4R3CPQ6ZMV5 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
PPP4R3CPQ6ZMV5 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
PPP4R3CPQ6ZMV5 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
PPP4R3CPQ6ZMV5 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PPP4R3CPQ6ZMV5 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
PPP4R3CPQ6ZMV5 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PPP4R3CPQ6ZMV5 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC28.55■■■□□ 2.16
PPP4R3CPQ6ZMV5 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.55■■■□□ 2.16
PPP4R3CPQ6ZMV5 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PPP4R3CPQ6ZMV5 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
PPP4R3CPQ6ZMV5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
PPP4R3CPQ6ZMV5 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PPP4R3CPQ6ZMV5 LINC00273-201ENST00000539813 1452 ntBASIC28.53■■■□□ 2.16
PPP4R3CPQ6ZMV5 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.53■■■□□ 2.16
PPP4R3CPQ6ZMV5 AC127502.1-201ENST00000399971 1502 ntBASIC28.53■■■□□ 2.16
PPP4R3CPQ6ZMV5 DUX4L11-201ENST00000611504 1267 ntBASIC28.52■■■□□ 2.16
PPP4R3CPQ6ZMV5 DUX4L12-201ENST00000614593 1267 ntBASIC28.52■■■□□ 2.16
PPP4R3CPQ6ZMV5 DUX4L14-201ENST00000621227 1267 ntBASIC28.52■■■□□ 2.16
PPP4R3CPQ6ZMV5 AP004833.2-201ENST00000532228 1454 ntBASIC28.52■■■□□ 2.16
PPP4R3CPQ6ZMV5 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
PPP4R3CPQ6ZMV5 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
PPP4R3CPQ6ZMV5 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.49■■■□□ 2.15
PPP4R3CPQ6ZMV5 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
PPP4R3CPQ6ZMV5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.49■■■□□ 2.15
PPP4R3CPQ6ZMV5 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
PPP4R3CPQ6ZMV5 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PPP4R3CPQ6ZMV5 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.48■■■□□ 2.15
PPP4R3CPQ6ZMV5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.48■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms