Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
YBX1P67809 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.05■■□□□ 1.6
YBX1P67809 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
YBX1P67809 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
YBX1P67809 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
YBX1P67809 AC142086.6-201ENST00000621154 1765 ntBASIC25.04■■□□□ 1.6
YBX1P67809 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.04■■□□□ 1.6
YBX1P67809 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
YBX1P67809 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.04■■□□□ 1.6
YBX1P67809 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
YBX1P67809 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.03■■□□□ 1.6
YBX1P67809 DUX4L29-201ENST00000425409 679 ntBASIC25.03■■□□□ 1.6
YBX1P67809 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
YBX1P67809 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
YBX1P67809 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.02■■□□□ 1.6
YBX1P67809 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
YBX1P67809 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.01■■□□□ 1.59
YBX1P67809 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.01■■□□□ 1.59
YBX1P67809 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25■■□□□ 1.59
YBX1P67809 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
YBX1P67809 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
YBX1P67809 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25■■□□□ 1.59
YBX1P67809 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25■■□□□ 1.59
YBX1P67809 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25■■□□□ 1.59
YBX1P67809 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25■■□□□ 1.59
YBX1P67809 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
YBX1P67809 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
YBX1P67809 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
YBX1P67809 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
YBX1P67809 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
YBX1P67809 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
YBX1P67809 DRD5P2-201ENST00000421395 2012 ntBASIC24.97■■□□□ 1.59
YBX1P67809 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
YBX1P67809 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
YBX1P67809 ABHD17AP4-201ENST00000411545 909 ntBASIC24.97■■□□□ 1.59
YBX1P67809 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.97■■□□□ 1.59
YBX1P67809 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
YBX1P67809 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
YBX1P67809 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
YBX1P67809 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.96■■□□□ 1.59
YBX1P67809 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
YBX1P67809 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
YBX1P67809 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
YBX1P67809 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.59
YBX1P67809 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
YBX1P67809 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
YBX1P67809 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.94■■□□□ 1.58
YBX1P67809 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.93■■□□□ 1.58
YBX1P67809 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
YBX1P67809 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
YBX1P67809 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.92■■□□□ 1.58
YBX1P67809 ZNRF2P2-203ENST00000454624 420 ntBASIC24.91■■□□□ 1.58
YBX1P67809 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.91■■□□□ 1.58
YBX1P67809 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
YBX1P67809 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
YBX1P67809 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.9■■□□□ 1.58
YBX1P67809 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.9■■□□□ 1.58
YBX1P67809 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.9■■□□□ 1.58
YBX1P67809 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
YBX1P67809 LINC00273-201ENST00000539813 1452 ntBASIC24.89■■□□□ 1.58
YBX1P67809 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.89■■□□□ 1.58
YBX1P67809 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.89■■□□□ 1.57
YBX1P67809 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
YBX1P67809 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
YBX1P67809 AC135983.2-203ENST00000454486 1613 ntBASIC24.88■■□□□ 1.57
YBX1P67809 WHAMMP2-203ENST00000563942 1603 ntBASIC24.88■■□□□ 1.57
YBX1P67809 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.87■■□□□ 1.57
YBX1P67809 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.87■■□□□ 1.57
YBX1P67809 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
YBX1P67809 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.86■■□□□ 1.57
YBX1P67809 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.86■■□□□ 1.57
YBX1P67809 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
YBX1P67809 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.86■■□□□ 1.57
YBX1P67809 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
YBX1P67809 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
YBX1P67809 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
YBX1P67809 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
YBX1P67809 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
YBX1P67809 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
YBX1P67809 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.85■■□□□ 1.57
YBX1P67809 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.85■■□□□ 1.57
YBX1P67809 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.85■■□□□ 1.57
YBX1P67809 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
YBX1P67809 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.84■■□□□ 1.57
YBX1P67809 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
YBX1P67809 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.82■■□□□ 1.56
YBX1P67809 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
YBX1P67809 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
YBX1P67809 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
YBX1P67809 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
YBX1P67809 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
YBX1P67809 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
YBX1P67809 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
YBX1P67809 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.79■■□□□ 1.56
YBX1P67809 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.79■■□□□ 1.56
YBX1P67809 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.79■■□□□ 1.56
YBX1P67809 AC100797.4-201ENST00000631653 1827 ntBASIC24.79■■□□□ 1.56
YBX1P67809 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.78■■□□□ 1.56
YBX1P67809 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.78■■□□□ 1.56
YBX1P67809 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms