Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.68■■□□□ 1.86
CD48P09326 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
CD48P09326 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CD48P09326 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CD48P09326 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CD48P09326 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CD48P09326 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.67■■□□□ 1.86
CD48P09326 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.66■■□□□ 1.86
CD48P09326 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.66■■□□□ 1.86
CD48P09326 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.66■■□□□ 1.86
CD48P09326 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
CD48P09326 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CD48P09326 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
CD48P09326 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.65■■□□□ 1.86
CD48P09326 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.65■■□□□ 1.86
CD48P09326 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CD48P09326 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
CD48P09326 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.64■■□□□ 1.86
CD48P09326 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.64■■□□□ 1.86
CD48P09326 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CD48P09326 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
CD48P09326 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.63■■□□□ 1.85
CD48P09326 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.63■■□□□ 1.85
CD48P09326 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.62■■□□□ 1.85
CD48P09326 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CD48P09326 AC135983.2-203ENST00000454486 1613 ntBASIC26.62■■□□□ 1.85
CD48P09326 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CD48P09326 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.62■■□□□ 1.85
CD48P09326 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CD48P09326 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CD48P09326 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
CD48P09326 WHAMMP2-203ENST00000563942 1603 ntBASIC26.61■■□□□ 1.85
CD48P09326 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CD48P09326 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CD48P09326 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.59■■□□□ 1.85
CD48P09326 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CD48P09326 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CD48P09326 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
CD48P09326 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CD48P09326 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.58■■□□□ 1.85
CD48P09326 AC044849.2-201ENST00000606596 710 ntBASIC26.58■■□□□ 1.85
CD48P09326 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.58■■□□□ 1.85
CD48P09326 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CD48P09326 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CD48P09326 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CD48P09326 LINC00273-201ENST00000539813 1452 ntBASIC26.56■■□□□ 1.84
CD48P09326 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.56■■□□□ 1.84
CD48P09326 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CD48P09326 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CD48P09326 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.55■■□□□ 1.84
CD48P09326 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.55■■□□□ 1.84
CD48P09326 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CD48P09326 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CD48P09326 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.54■■□□□ 1.84
CD48P09326 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CD48P09326 RPS2P35-201ENST00000443417 897 ntBASIC26.54■■□□□ 1.84
CD48P09326 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
CD48P09326 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CD48P09326 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CD48P09326 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CD48P09326 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CD48P09326 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.53■■□□□ 1.84
CD48P09326 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CD48P09326 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CD48P09326 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CD48P09326 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CD48P09326 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CD48P09326 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CD48P09326 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
CD48P09326 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CD48P09326 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.49■■□□□ 1.83
CD48P09326 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.49■■□□□ 1.83
CD48P09326 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CD48P09326 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.48■■□□□ 1.83
CD48P09326 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.47■■□□□ 1.83
CD48P09326 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.47■■□□□ 1.83
CD48P09326 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CD48P09326 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CD48P09326 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
CD48P09326 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.83
CD48P09326 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.45■■□□□ 1.83
CD48P09326 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
CD48P09326 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CD48P09326 AC021231.2-201ENST00000594613 730 ntBASIC26.44■■□□□ 1.82
CD48P09326 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.44■■□□□ 1.82
CD48P09326 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CD48P09326 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.43■■□□□ 1.82
CD48P09326 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CD48P09326 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CD48P09326 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CD48P09326 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CD48P09326 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.42■■□□□ 1.82
CD48P09326 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
CD48P09326 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CD48P09326 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.42■■□□□ 1.82
CD48P09326 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
CD48P09326 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.41■■□□□ 1.82
CD48P09326 AP002414.2-202ENST00000590929 1450 ntBASIC26.41■■□□□ 1.82
CD48P09326 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CD48P09326 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms